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Jennifer J. Loros - Publications

Affiliations: 
Biochemistry & Cell Biology Dartmouth College, Hanover, NH, United States 
Area:
Biochemistry, Genetics, Pathology, Oncology
Website:
https://geiselmed.dartmouth.edu/faculty/facultydb/view.php/?uid=127
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143 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Wang B, Zhou X, Kettenbach AN, Mitchell HD, Markillie LM, Loros JJ, Dunlap JC. A crucial role for dynamic expression of components encoding the negative arm of the circadian clock. Nature Communications. 14: 3371. PMID 37291101 DOI: 10.1038/s41467-023-38817-7  0.63
2023 Wang B, Zhou X, Kettenbach AN, Mitchell HD, Markillie LM, Loros JJ, Dunlap JC. A crucial role for dynamic expression of components encoding the negative arm of the circadian clock. Biorxiv : the Preprint Server For Biology. PMID 37162945 DOI: 10.1101/2023.04.24.538162  0.639
2023 Kelliher CM, Stevenson EL, Loros JJ, Dunlap JC. Nutritional compensation of the circadian clock is a conserved process influenced by gene expression regulation and mRNA stability. Plos Biology. 21: e3001961. PMID 36603054 DOI: 10.1371/journal.pbio.3001961  0.649
2022 Wang Z, Bartholomai BM, Loros JJ, Dunlap JC. Optimized fluorescent proteins for 4-color and photoconvertible live-cell imaging in Neurospora crassa. Fungal Genetics and Biology : Fg & B. 164: 103763. PMID 36481248 DOI: 10.1016/j.fgb.2022.103763  0.496
2022 Bartholomai BM, Gladfelter AS, Loros JJ, Dunlap JC. PRD-2 mediates clock-regulated perinuclear localization of clock gene RNAs within the circadian cycle of . Proceedings of the National Academy of Sciences of the United States of America. 119: e2203078119. PMID 35881801 DOI: 10.1073/pnas.2203078119  0.637
2021 Bartholomai BM, Gladfelter AS, Loros JJ, Dunlap JC. Quantitative single molecule RNA-FISH and RNase-free cell wall digestion in Neurospora crassa. Fungal Genetics and Biology : Fg & B. 156: 103615. PMID 34425213 DOI: 10.1016/j.fgb.2021.103615  0.446
2021 Wang B, Zhou X, Gerber SA, Loros JJ, Dunlap JC. Cellular Calcium Levels Influenced by NCA-2 Impact Circadian Period Determination in . Mbio. e0149321. PMID 34182778 DOI: 10.1128/mBio.01493-21  0.589
2020 Kelliher CM, Lambreghts R, Xiang Q, Baker CL, Loros JJ, Dunlap JC. PRD-2 directly regulates and counteracts nonsense mediated decay in the circadian clock. Elife. 9. PMID 33295874 DOI: 10.7554/eLife.64007  0.674
2020 Chen S, Fuller KK, Dunlap JC, Loros JJ. A Pro- and Anti-inflammatory Axis Modulates the Macrophage Circadian Clock. Frontiers in Immunology. 11: 867. PMID 32477351 DOI: 10.3389/Fimmu.2020.00867  0.577
2020 Kelliher CM, Loros JJ, Dunlap JC. Evaluating the circadian rhythm and response to glucose addition in dispersed growth cultures of Neurospora crassa. Fungal Biology. 124: 398-406. PMID 32389302 DOI: 10.1016/J.Funbio.2019.11.004  0.579
2020 Loros JJ, Dunlap JC. Carlene Allen Raper 1925-2019 Fungal Genetics Reports. 64. DOI: 10.4148/1941-4765.2174  0.445
2019 Wang B, Kettenbach AN, Zhou X, Loros JJ, Dunlap JC. The Phospho-Code Determining Circadian Feedback Loop Closure and Output in Neurospora. Molecular Cell. PMID 30954403 DOI: 10.1016/J.Molcel.2019.03.003  0.699
2019 Loros JJ. Principles of the animal molecular clock learned from Neurospora. The European Journal of Neuroscience. PMID 30687965 DOI: 10.1111/Ejn.14354  0.573
2018 Hurley JM, Jankowski MS, De Los Santos H, Crowell AM, Fordyce SB, Zucker JD, Kumar N, Purvine SO, Robinson EW, Shukla A, Zink E, Cannon WR, Baker SE, Loros JJ, Dunlap JC. Circadian Proteomic Analysis Uncovers Mechanisms of Post-Transcriptional Regulation in Metabolic Pathways. Cell Systems. PMID 30553726 DOI: 10.1016/J.Cels.2018.10.014  0.815
2018 Crowell AM, Greene CS, Loros JJ, Dunlap JC. Learning and Imputation for Mass-spec Bias Reduction (LIMBR). Bioinformatics (Oxford, England). PMID 30247517 DOI: 10.1093/Bioinformatics/Bty828  0.505
2018 Fuller KK, Dunlap JC, Loros JJ. Light-regulated promoters for tunable, temporal, and affordable control of fungal gene expression. Applied Microbiology and Biotechnology. PMID 29569180 DOI: 10.1007/S00253-018-8887-7  0.678
2018 Zhou X, Wang B, Emerson JM, Ringelberg CS, Gerber SA, Loros JJ, Dunlap JC. A HAD family phosphatase CSP-6 regulates the circadian output pathway in Neurospora crassa. Plos Genetics. 14: e1007192. PMID 29351294 DOI: 10.1371/Journal.Pgen.1007192  0.694
2017 Chen S, Fuller KK, Dunlap JC, Loros JJ. Circadian Clearance of a Fungal Pathogen from the Lung Is Not Based on Cell-intrinsic Macrophage Rhythms. Journal of Biological Rhythms. 748730417745178. PMID 29281921 DOI: 10.1177/0748730417745178  0.591
2017 Dunlap JC, Loros JJ. Just-So Stories and Origin Myths: Phosphorylation and Structural Disorder in Circadian Clock Proteins. Molecular Cell. PMID 29276084 DOI: 10.1016/J.Molcel.2017.11.028  0.682
2017 Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, ... ... Loros JJ, et al. Guidelines for Genome-Scale Analysis of Biological Rhythms. Journal of Biological Rhythms. 748730417728663. PMID 29098954 DOI: 10.1177/0748730417728663  0.738
2017 Dunlap JC, Loros JJ. Making Time: Conservation of Biological Clocks from Fungi to Animals. Microbiology Spectrum. 5. PMID 28527179 DOI: 10.1128/Microbiolspec.Funk-0039-2016  0.706
2016 Fuller KK, Dunlap JC, Loros JJ. Fungal Light Sensing at the Bench and Beyond. Advances in Genetics. 96: 1-51. PMID 27968729 DOI: 10.1016/Bs.Adgen.2016.08.002  0.624
2016 Fuller KK, Cramer RA, Zegans ME, Dunlap JC, Loros JJ. Aspergillus fumigatus Photobiology Illuminates the Marked Heterogeneity between Isolates. Mbio. 7. PMID 27651362 DOI: 10.1128/Mbio.01517-16  0.603
2016 Hurley JM, Loros JJ, Dunlap JC. Circadian Oscillators: Around the Transcription-Translation Feedback Loop and on to Output. Trends in Biochemical Sciences. PMID 27498225 DOI: 10.1016/J.Tibs.2016.07.009  0.811
2016 Olivares-Yañez C, Emerson J, Kettenbach A, Loros JJ, Dunlap JC, Larrondo LF. Modulation of Circadian Gene Expression and Metabolic Compensation by the RCO-1 Co-Repressor of Neurospora crassa. Genetics. PMID 27449058 DOI: 10.1534/Genetics.116.191064  0.715
2016 Conrad KS, Hurley JM, Widom J, Ringelberg CS, Loros JJ, Dunlap JC, Crane BR. Structure of the frequency-interacting RNA helicase: a protein interaction hub for the circadian clock. The Embo Journal. PMID 27340124 DOI: 10.15252/Embj.201694327  0.776
2016 Dunlap JC, Loros JJ. Yes, circadian rhythms actually do affect almost everything. Cell Research. PMID 27241553 DOI: 10.1038/Cr.2016.65  0.635
2016 Dasgupta A, Fuller KK, Dunlap JC, Loros JJ. Seeing the world differently: variability in the photosensory mechanisms of two model fungi. Environmental Microbiology. 18: 5-20. PMID 26373782 DOI: 10.1111/1462-2920.13055  0.617
2015 Wang B, Zhou X, Loros JJ, Dunlap JC. Alternative use of DNA binding domains by the Neurospora White Collar Complex dictates circadian regulation and light responses. Molecular and Cellular Biology. PMID 26711258 DOI: 10.1128/Mcb.00841-15  0.67
2015 Emerson JM, Bartholomai BM, Ringelberg CS, Baker SE, Loros JJ, Dunlap JC. period-1 encodes an ATP-dependent RNA helicase that influences nutritional compensation of the Neurospora circadian clock. Proceedings of the National Academy of Sciences of the United States of America. PMID 26647184 DOI: 10.1073/Pnas.1521918112  0.696
2015 Hurley JM, Loros JJ, Dunlap JC. The circadian system as an organizer of metabolism. Fungal Genetics and Biology : Fg & B. PMID 26498192 DOI: 10.1016/J.Fgb.2015.10.002  0.778
2015 Fuller KK, Chen S, Loros JJ, Dunlap JC. Development of the CRISPR/Cas9 system for targeted gene disruption in Aspergillus fumigatus. Eukaryotic Cell. PMID 26318395 DOI: 10.1128/Ec.00107-15  0.546
2015 Hurley JH, Dasgupta A, Andrews P, Crowell AM, Ringelberg C, Loros JJ, Dunlap JC. A Tool Set for the Genome-Wide Analysis of Neurospora crassa by RT-PCR. G3 (Bethesda, Md.). 5: 2043-9. PMID 26248984 DOI: 10.1534/G3.115.019141  0.624
2015 Dasgupta A, Chen CH, Lee C, Gladfelter AS, Dunlap JC, Loros JJ. Biological Significance of Photoreceptor Photocycle Length: VIVID Photocycle Governs the Dynamic VIVID-White Collar Complex Pool Mediating Photo-adaptation and Response to Changes in Light Intensity. Plos Genetics. 11: e1005215. PMID 25978382 DOI: 10.1371/Journal.Pgen.1005215  0.812
2015 Oliveira AG, Stevani CV, Waldenmaier HE, Viviani V, Emerson JM, Loros JJ, Dunlap JC. Circadian control sheds light on fungal bioluminescence. Current Biology : Cb. 25: 964-8. PMID 25802150 DOI: 10.1016/J.Cub.2015.02.021  0.644
2015 Hurley J, Loros JJ, Dunlap JC. Dissecting the mechanisms of the clock in Neurospora. Methods in Enzymology. 551: 29-52. PMID 25662450 DOI: 10.1016/Bs.Mie.2014.10.009  0.809
2015 Larrondo LF, Olivares-Yañez C, Baker CL, Loros JJ, Dunlap JC. Circadian rhythms. Decoupling circadian clock protein turnover from circadian period determination. Science (New York, N.Y.). 347: 1257277. PMID 25635104 DOI: 10.1126/Science.1257277  0.687
2015 Fuller KK, Loros JJ, Dunlap JC. Fungal photobiology: visible light as a signal for stress, space and time. Current Genetics. 61: 275-88. PMID 25323429 DOI: 10.1007/S00294-014-0451-0  0.61
2014 Roche CM, Loros JJ, McCluskey K, Glass NL. Neurospora crassa: looking back and looking forward at a model microbe. American Journal of Botany. 101: 2022-35. PMID 25480699 DOI: 10.3732/Ajb.1400377  0.334
2014 Hurley JM, Dasgupta A, Emerson JM, Zhou X, Ringelberg CS, Knabe N, Lipzen AM, Lindquist EA, Daum CG, Barry KW, Grigoriev IV, Smith KM, Galagan JE, Bell-Pedersen D, Freitag M, ... ... Loros JJ, et al. Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential. Proceedings of the National Academy of Sciences of the United States of America. 111: 16995-7002. PMID 25362047 DOI: 10.1073/Pnas.1418963111  0.826
2014 Wang B, Kettenbach AN, Gerber SA, Loros JJ, Dunlap JC. Neurospora WC-1 recruits SWI/SNF to remodel frequency and initiate a circadian cycle. Plos Genetics. 10: e1004599. PMID 25254987 DOI: 10.1371/Journal.Pgen.1004599  0.711
2014 Gooch VD, Johnson AE, Larrondo LF, Loros JJ, Dunlap JC. Bright to dim oscillatory response of the Neurospora circadian oscillator. Journal of Biological Rhythms. 29: 49-59. PMID 24492882 DOI: 10.1177/0748730413517983  0.662
2014 Gooch VD, Johnson AE, Bourne BJ, Nix BT, Maas JA, Fox JA, Loros JJ, Larrondo LF, Dunlap JC. A kinetic study of the effects of light on circadian rhythmicity of the frq promoter of Neurospora crassa. Journal of Biological Rhythms. 29: 38-48. PMID 24492881 DOI: 10.1177/0748730413517981  0.694
2013 Hurley JM, Larrondo LF, Loros JJ, Dunlap JC. Conserved RNA helicase FRH acts nonenzymatically to support the intrinsically disordered neurospora clock protein FRQ. Molecular Cell. 52: 832-43. PMID 24316221 DOI: 10.1016/J.Molcel.2013.11.005  0.774
2013 Gamsby JJ, Templeton EL, Bonvini LA, Wang W, Loros JJ, Dunlap JC, Green AI, Gulick D. The circadian Per1 and Per2 genes influence alcohol intake, reinforcement, and blood alcohol levels. Behavioural Brain Research. 249: 15-21. PMID 23608482 DOI: 10.1016/J.Bbr.2013.04.016  0.504
2013 Fuller KK, Ringelberg CS, Loros JJ, Dunlap JC. The fungal pathogen Aspergillus fumigatus regulates growth, metabolism, and stress resistance in response to light. Mbio. 4. PMID 23532976 DOI: 10.1128/Mbio.00142-13  0.648
2012 Hurley JM, Chen CH, Loros JJ, Dunlap JC. Light-inducible system for tunable protein expression in Neurospora crassa. G3 (Bethesda, Md.). 2: 1207-12. PMID 23050231 DOI: 10.1534/G3.112.003939  0.817
2012 Grant GD, Gamsby J, Martyanov V, Brooks L, George LK, Mahoney JM, Loros JJ, Dunlap JC, Whitfield ML. Live-cell monitoring of periodic gene expression in synchronous human cells identifies Forkhead genes involved in cell cycle control. Molecular Biology of the Cell. 23: 3079-93. PMID 22740631 DOI: 10.1091/Mbc.E11-02-0170  0.624
2012 Larrondo LF, Loros JJ, Dunlap JC. High-resolution spatiotemporal analysis of gene expression in real time: in vivo analysis of circadian rhythms in Neurospora crassa using a FREQUENCY-luciferase translational reporter. Fungal Genetics and Biology : Fg & B. 49: 681-3. PMID 22695169 DOI: 10.1016/J.Fgb.2012.06.001  0.674
2012 Baker CL, Loros JJ, Dunlap JC. The circadian clock of Neurospora crassa. Fems Microbiology Reviews. 36: 95-110. PMID 21707668 DOI: 10.1111/J.1574-6976.2011.00288.X  0.7
2011 Vaidya AT, Chen CH, Dunlap JC, Loros JJ, Crane BR. Structure of a light-activated LOV protein dimer that regulates transcription. Science Signaling. 4: ra50. PMID 21868352 DOI: 10.1126/Scisignal.2001945  0.8
2011 Belden WJ, Lewis ZA, Selker EU, Loros JJ, Dunlap JC. CHD1 remodels chromatin and influences transient DNA methylation at the clock gene frequency. Plos Genetics. 7: e1002166. PMID 21811413 DOI: 10.1371/Journal.Pgen.1002166  0.629
2011 Poliandri AH, Gamsby JJ, Christian M, Spinella MJ, Loros JJ, Dunlap JC, Parker MG. Modulation of clock gene expression by the transcriptional coregulator receptor interacting protein 140 (RIP140). Journal of Biological Rhythms. 26: 187-99. PMID 21628546 DOI: 10.1177/0748730411401579  0.66
2010 Chen CH, DeMay BS, Gladfelter AS, Dunlap JC, Loros JJ. Physical interaction between VIVID and white collar complex regulates photoadaptation in Neurospora. Proceedings of the National Academy of Sciences of the United States of America. 107: 16715-20. PMID 20733070 DOI: 10.1073/Pnas.1011190107  0.818
2010 Chen CH, Dunlap JC, Loros JJ. Neurospora illuminates fungal photoreception. Fungal Genetics and Biology : Fg & B. 47: 922-9. PMID 20637887 DOI: 10.1016/J.Fgb.2010.07.005  0.807
2010 Klix V, Nowrousian M, Ringelberg C, Loros JJ, Dunlap JC, Pöggeler S. Functional characterization of MAT1-1-specific mating-type genes in the homothallic ascomycete Sordaria macrospora provides new insights into essential and nonessential sexual regulators. Eukaryotic Cell. 9: 894-905. PMID 20435701 DOI: 10.1128/Ec.00019-10  0.573
2010 Froehlich AC, Chen CH, Belden WJ, Madeti C, Roenneberg T, Merrow M, Loros JJ, Dunlap JC. Genetic and molecular characterization of a cryptochrome from the filamentous fungus Neurospora crassa. Eukaryotic Cell. 9: 738-50. PMID 20305004 DOI: 10.1128/Ec.00380-09  0.823
2010 Shi M, Collett M, Loros JJ, Dunlap JC. FRQ-interacting RNA helicase mediates negative and positive feedback in the Neurospora circadian clock. Genetics. 184: 351-61. PMID 19948888 DOI: 10.1534/Genetics.109.111393  0.659
2009 Chen CH, Loros JJ. Neurospora sees the light: light signaling components in a model system. Communicative & Integrative Biology. 2: 448-51. PMID 19907715 DOI: 10.4161/Cib.2.5.8835  0.776
2009 Heim KC, Gamsby JJ, Hever MP, Freemantle SJ, Loros JJ, Dunlap JC, Spinella MJ. Retinoic acid mediates long-paced oscillations in retinoid receptor activity: evidence for a potential role for RIP140. Plos One. 4: e7639. PMID 19862326 DOI: 10.1371/Journal.Pone.0007639  0.559
2009 Mehra A, Baker CL, Loros JJ, Dunlap JC. Post-translational modifications in circadian rhythms. Trends in Biochemical Sciences. 34: 483-90. PMID 19740663 DOI: 10.1016/J.Tibs.2009.06.006  0.657
2009 Gamsby JJ, Loros JJ, Dunlap JC. A phylogenetically conserved DNA damage response resets the circadian clock. Journal of Biological Rhythms. 24: 193-202. PMID 19465696 DOI: 10.1177/0748730409334748  0.607
2009 Baker CL, Kettenbach AN, Loros JJ, Gerber SA, Dunlap JC. Quantitative proteomics reveals a dynamic interactome and phase-specific phosphorylation in the Neurospora circadian clock. Molecular Cell. 34: 354-63. PMID 19450533 DOI: 10.1016/J.Molcel.2009.04.023  0.664
2009 Mehra A, Shi M, Baker CL, Colot HV, Loros JJ, Dunlap JC. A role for casein kinase 2 in the mechanism underlying circadian temperature compensation. Cell. 137: 749-60. PMID 19450520 DOI: 10.1016/J.Cell.2009.03.019  0.584
2009 Larrondo LF, Colot HV, Baker CL, Loros JJ, Dunlap JC. Fungal functional genomics: tunable knockout-knock-in expression and tagging strategies. Eukaryotic Cell. 8: 800-4. PMID 19286985 DOI: 10.1128/Ec.00072-09  0.576
2009 Chen CH, Ringelberg CS, Gross RH, Dunlap JC, Loros JJ. Genome-wide analysis of light-inducible responses reveals hierarchical light signalling in Neurospora. The Embo Journal. 28: 1029-42. PMID 19262566 DOI: 10.1038/Emboj.2009.54  0.802
2009 Duffield GE, Watson NP, Mantani A, Peirson SN, Robles-Murguia M, Loros JJ, Israel MA, Dunlap JC. A role for Id2 in regulating photic entrainment of the mammalian circadian system. Current Biology : Cb. 19: 297-304. PMID 19217292 DOI: 10.1016/J.Cub.2008.12.052  0.674
2009 Lambreghts R, Shi M, Belden WJ, Decaprio D, Park D, Henn MR, Galagan JE, Bastürkmen M, Birren BW, Sachs MS, Dunlap JC, Loros JJ. A high-density single nucleotide polymorphism map for Neurospora crassa. Genetics. 181: 767-81. PMID 19015548 DOI: 10.1534/Genetics.108.089292  0.506
2009 Mehra A, Shi M, Baker CL, Colot HV, Loros JJ, Dunlap JC. CK2 and temperature compensation in Neurospora Sleep and Biological Rhythms. 7: 162-171. DOI: 10.1111/J.1479-8425.2009.00406.X  0.547
2008 Hong CI, Ruoff P, Loros JJ, Dunlap JC. Closing the circadian negative feedback loop: FRQ-dependent clearance of WC-1 from the nucleus. Genes & Development. 22: 3196-204. PMID 18997062 DOI: 10.1101/Gad.1706908  0.624
2008 Hong CI, Jolma IW, Loros JJ, Dunlap JC, Ruoff P. Simulating dark expressions and interactions of frq and wc-1 in the Neurospora circadian clock. Biophysical Journal. 94: 1221-32. PMID 17965132 DOI: 10.1529/Biophysj.107.115154  0.694
2008 Gooch VD, Mehra A, Larrondo LF, Fox J, Touroutoutoudis M, Loros JJ, Dunlap JC. Fully codon-optimized luciferase uncovers novel temperature characteristics of the Neurospora clock. Eukaryotic Cell. 7: 28-37. PMID 17766461 DOI: 10.1128/Ec.00257-07  0.639
2007 Dunlap JC, Loros JJ, Colot HV, Mehra A, Belden WJ, Shi M, Hong CI, Larrondo LF, Baker CL, Chen CH, Schwerdtfeger C, Collopy PD, Gamsby JJ, Lambreghts R. A circadian clock in Neurospora: how genes and proteins cooperate to produce a sustained, entrainable, and compensated biological oscillator with a period of about a day. Cold Spring Harbor Symposia On Quantitative Biology. 72: 57-68. PMID 18522516 DOI: 10.1101/Sqb.2007.72.072  0.834
2007 Loros JJ, Dunlap JC, Larrondo LF, Shi M, Belden WJ, Gooch VD, Chen CH, Baker CL, Mehra A, Colot HV, Schwerdtfeger C, Lambreghts R, Collopy PD, Gamsby JJ, Hong CI. Circadian output, input, and intracellular oscillators: insights into the circadian systems of single cells. Cold Spring Harbor Symposia On Quantitative Biology. 72: 201-14. PMID 18419278 DOI: 10.1101/Sqb.2007.72.067  0.819
2007 Shi M, Larrondo LF, Loros JJ, Dunlap JC. A developmental cycle masks output from the circadian oscillator under conditions of choline deficiency in Neurospora. Proceedings of the National Academy of Sciences of the United States of America. 104: 20102-7. PMID 18056807 DOI: 10.1073/Pnas.0706631104  0.666
2007 Diernfellner A, Colot HV, Dintsis O, Loros JJ, Dunlap JC, Brunner M. Long and short isoforms of Neurospora clock protein FRQ support temperature-compensated circadian rhythms. Febs Letters. 581: 5759-64. PMID 18037381 DOI: 10.1016/J.Febslet.2007.11.043  0.635
2007 Belden WJ, Larrondo LF, Froehlich AC, Shi M, Chen CH, Loros JJ, Dunlap JC. The band mutation in Neurospora crassa is a dominant allele of ras-1 implicating RAS signaling in circadian output. Genes & Development. 21: 1494-505. PMID 17575051 DOI: 10.1101/Gad.1551707  0.75
2007 Zoltowski BD, Schwerdtfeger C, Widom J, Loros JJ, Bilwes AM, Dunlap JC, Crane BR. Conformational switching in the fungal light sensor Vivid. Science (New York, N.Y.). 316: 1054-7. PMID 17510367 DOI: 10.1126/Science.1137128  0.606
2007 Nowrousian M, Frank S, Koers S, Strauch P, Weitner T, Ringelberg C, Dunlap JC, Loros JJ, Kück U. The novel ER membrane protein PRO41 is essential for sexual development in the filamentous fungus Sordaria macrospora. Molecular Microbiology. 64: 923-37. PMID 17501918 DOI: 10.1111/J.1365-2958.2007.05694.X  0.571
2007 Dunlap JC, Borkovich KA, Henn MR, Turner GE, Sachs MS, Glass NL, McCluskey K, Plamann M, Galagan JE, Birren BW, Weiss RL, Townsend JP, Loros JJ, Nelson MA, Lambreghts R, et al. Enabling a community to dissect an organism: overview of the Neurospora functional genomics project. Advances in Genetics. 57: 49-96. PMID 17352902 DOI: 10.1016/S0065-2660(06)57002-6  0.549
2007 Belden WJ, Loros JJ, Dunlap JC. Execution of the circadian negative feedback loop in Neurospora requires the ATP-dependent chromatin-remodeling enzyme CLOCKSWITCH. Molecular Cell. 25: 587-600. PMID 17317630 DOI: 10.1016/J.Molcel.2007.01.010  0.664
2006 Dunlap JC, Loros JJ. How fungi keep time: circadian system in Neurospora and other fungi. Current Opinion in Microbiology. 9: 579-87. PMID 17064954 DOI: 10.1016/J.Mib.2006.10.008  0.698
2006 Belden WJ, Loros JJ, Dunlap JC. CLOCK leaves its mark on histones. Trends in Biochemical Sciences. 31: 610-3. PMID 17027273 DOI: 10.1016/J.Tibs.2006.09.009  0.688
2006 Mehra A, Hong CI, Shi M, Loros JJ, Dunlap JC, Ruoff P. Circadian rhythmicity by autocatalysis. Plos Computational Biology. 2: e96. PMID 16863394 DOI: 10.1371/Journal.Pcbi.0020096  0.656
2006 Pregueiro AM, Liu Q, Baker CL, Dunlap JC, Loros JJ. The Neurospora checkpoint kinase 2: a regulatory link between the circadian and cell cycles. Science (New York, N.Y.). 313: 644-9. PMID 16809488 DOI: 10.1126/Science.1121716  0.67
2006 Pöggeler S, Nowrousian M, Ringelberg C, Loros JJ, Dunlap JC, Kück U. Microarray and real-time PCR analyses reveal mating type-dependent gene expression in a homothallic fungus. Molecular Genetics and Genomics : Mgg. 275: 492-503. PMID 16482473 DOI: 10.1007/S00438-006-0107-Y  0.594
2005 Froehlich AC, Noh B, Vierstra RD, Loros J, Dunlap JC. Genetic and molecular analysis of phytochromes from the filamentous fungus Neurospora crassa. Eukaryotic Cell. 4: 2140-52. PMID 16339731 DOI: 10.1128/Ec.4.12.2140-2152.2005  0.677
2005 Ruoff P, Loros JJ, Dunlap JC. The relationship between FRQ-protein stability and temperature compensation in the Neurospora circadian clock. Proceedings of the National Academy of Sciences of the United States of America. 102: 17681-6. PMID 16314576 DOI: 10.1073/Pnas.0505137102  0.65
2005 Elvin M, Loros JJ, Dunlap JC, Heintzen C. The PAS/LOV protein VIVID supports a rapidly dampened daytime oscillator that facilitates entrainment of the Neurospora circadian clock. Genes & Development. 19: 2593-605. PMID 16264193 DOI: 10.1101/Gad.349305  0.697
2005 Colot HV, Loros JJ, Dunlap JC. Temperature-modulated alternative splicing and promoter use in the Circadian clock gene frequency. Molecular Biology of the Cell. 16: 5563-71. PMID 16195340 DOI: 10.1091/Mbc.E05-08-0756  0.66
2005 Duffield G, Loros JJ, Dunlap JC. Analysis of circadian output rhythms of gene expression in Neurospora and mammalian cells in culture. Methods in Enzymology. 393: 315-41. PMID 15817297 DOI: 10.1016/S0076-6879(05)93014-0  0.638
2005 Dunlap JC, Loros JJ. Analysis of circadian rhythms in Neurospora: overview of assays and genetic and molecular biological manipulation. Methods in Enzymology. 393: 3-22. PMID 15817284 DOI: 10.1016/S0076-6879(05)93001-2  0.731
2005 Loros J. A kinase for light and time. Molecular Microbiology. 56: 299-302. PMID 15813724 DOI: 10.1111/J.1365-2958.2005.04546.X  0.589
2005 Nowrousian M, Ringelberg C, Dunlap JC, Loros JJ, Kück U. Cross-species microarray hybridization to identify developmentally regulated genes in the filamentous fungus Sordaria macrospora. Molecular Genetics and Genomics : Mgg. 273: 137-49. PMID 15778868 DOI: 10.1007/S00438-005-1118-9  0.594
2005 Pregueiro AM, Price-Lloyd N, Bell-Pedersen D, Heintzen C, Loros JJ, Dunlap JC. Assignment of an essential role for the Neurospora frequency gene in circadian entrainment to temperature cycles. Proceedings of the National Academy of Sciences of the United States of America. 102: 2210-5. PMID 15677317 DOI: 10.1073/Pnas.0406506102  0.679
2004 Dunlap JC, Loros JJ. The neurospora circadian system. Journal of Biological Rhythms. 19: 414-24. PMID 15534321 DOI: 10.1177/0748730404269116  0.746
2004 Christensen MK, Falkeid G, Loros JJ, Dunlap JC, Lillo C, Ruoff P. A nitrate-induced frq-less oscillator in Neurospora crassa. Journal of Biological Rhythms. 19: 280-6. PMID 15245647 DOI: 10.1177/0748730404265532  0.655
2004 Borkovich KA, Alex LA, Yarden O, Freitag M, Turner GE, Read ND, Seiler S, Bell-Pedersen D, Paietta J, Plesofsky N, Plamann M, Goodrich-Tanrikulu M, Schulte U, Mannhaupt G, Nargang FE, ... ... Loros JJ, et al. Lessons from the genome sequence of Neurospora crassa: tracing the path from genomic blueprint to multicellular organism. Microbiology and Molecular Biology Reviews : Mmbr. 68: 1-108. PMID 15007097 DOI: 10.1128/Mmbr.68.1.1-108.2004  0.606
2003 Froehlich AC, Pregueiro A, Lee K, Denault D, Colot H, Nowrousian M, Loros JJ, Dunlap JC. The molecular workings of the Neurospora biological clock. Novartis Foundation Symposium. 253: 184-98; discussion 1. PMID 14712922 DOI: 10.1002/0470090839.Ch14  0.728
2003 Nowrousian M, Duffield GE, Loros JJ, Dunlap JC. The frequency gene is required for temperature-dependent regulation of many clock-controlled genes in Neurospora crassa. Genetics. 164: 923-33. PMID 12871904  0.655
2003 Froehlich AC, Loros JJ, Dunlap JC. Rhythmic binding of a WHITE COLLAR-containing complex to the frequency promoter is inhibited by FREQUENCY. Proceedings of the National Academy of Sciences of the United States of America. 100: 5914-9. PMID 12714686 DOI: 10.1073/Pnas.1030057100  0.654
2003 Kramer C, Loros JJ, Dunlap JC, Crosthwaite SK. Role for antisense RNA in regulating circadian clock function in Neurospora crassa. Nature. 421: 948-52. PMID 12607002 DOI: 10.1038/Nature01427  0.643
2003 Lee K, Dunlap JC, Loros JJ. Roles for WHITE COLLAR-1 in circadian and general photoperception in Neurospora crassa. Genetics. 163: 103-14. PMID 12586700  0.662
2002 Shinohara ML, Correa A, Bell-Pedersen D, Dunlap JC, Loros JJ. Neurospora clock-controlled gene 9 (ccg-9) encodes trehalose synthase: circadian regulation of stress responses and development. Eukaryotic Cell. 1: 33-43. PMID 12455969 DOI: 10.1128/Ec.1.1.33-43.2002  0.71
2002 Froehlich AC, Liu Y, Loros JJ, Dunlap JC. White Collar-1, a circadian blue light photoreceptor, binding to the frequency promoter. Science (New York, N.Y.). 297: 815-9. PMID 12098706 DOI: 10.1126/Science.1073681  0.66
2002 Duffield GE, Best JD, Meurers BH, Bittner A, Loros JJ, Dunlap JC. Circadian programs of transcriptional activation, signaling, and protein turnover revealed by microarray analysis of mammalian cells. Current Biology : Cb. 12: 551-7. PMID 11937023 DOI: 10.1016/S0960-9822(02)00765-0  0.683
2002 Collett MA, Garceau N, Dunlap JC, Loros JJ. Light and clock expression of the Neurospora clock gene frequency is differentially driven by but dependent on WHITE COLLAR-2. Genetics. 160: 149-58. PMID 11805052  0.674
2001 Bell-Pedersen D, Lewis ZA, Loros JJ, Dunlap JC. The Neurospora circadian clock regulates a transcription factor that controls rhythmic expression of the output eas(ccg-2) gene. Molecular Microbiology. 41: 897-909. PMID 11532152 DOI: 10.1046/J.1365-2958.2001.02558.X  0.725
2001 Collett MA, Dunlap JC, Loros JJ. Circadian clock-specific roles for the light response protein white collar-2 Molecular and Cellular Biology. 21: 2619-2628. PMID 11283242 DOI: 10.1128/Mcb.21.8.2619-2628.2001  0.647
2001 Heintzen C, Loros JJ, Dunlap JC. The PAS protein VIVID defines a clock-associated feedback loop that represses light input, modulates gating, and regulates clock resetting Cell. 104: 453-464. PMID 11239402 DOI: 10.1016/S0092-8674(01)00232-X  0.706
2001 Denault DL, Loros JJ, Dunlap JC. WC-2 mediates WC-1-FRQ interaction within the PAS protein-linked circadian feedback loop of Neurospora Embo Journal. 20: 109-117. PMID 11226161 DOI: 10.1093/Emboj/20.1.109  0.655
2001 Loros JJ, Dunlap JC. Genetic and molecular analysis of circadian rhythms in Neurospora Annual Review of Physiology. 63: 757-794. PMID 11181975 DOI: 10.1146/Annurev.Physiol.63.1.757  0.719
2001 Collett MA, Loros JJ, Dunlap JC. The Clock affecting 1 mutation of Neurospora is a recurrence of the frq7 mutation7 Fungal Genetics Reports. 48: 7-9. DOI: 10.4148/1941-4765.1168  0.517
2000 Lee K, Loros JJ, Dunlap JC. Interconnected feedback loops in the Neurospora circadian system Science. 289: 107-110. PMID 10884222 DOI: 10.1126/Science.289.5476.107  0.688
2000 Liu Y, Loros J, Dunlap JC. Phosphorylation of the Neurospora clock protein FREQUENCY determines its degradation rate and strongly influences the period length of the circadian clock Proceedings of the National Academy of Sciences of the United States of America. 97: 234-239. PMID 10618401 DOI: 10.1073/Pnas.97.1.234  0.594
2000 Yagita K, Yamaguchi S, Tamanini F, Horst GTJvd, Hoeijmakers JHJ, Yasui A, Loros JJ, Dunlap JC, Okamura H. Dimerization and nuclear entry of mPER proteins in mammalian cells Genes & Development. 14: 1353-1363. DOI: 10.1101/Gad.14.11.1353  0.631
1999 Liu Y, Heintzen C, Loros J, Dunlap JC. Regulation of clock genes Cellular and Molecular Life Sciences. 55: 1195-1205. PMID 10487202 DOI: 10.1007/S000180050366  0.666
1999 Dunlap JC, Loros JJ, Liu Y, Crosthwaite SK. Eukaryotic circadian systems: Cycles in common Genes to Cells. 4: 1-10. PMID 10231388 DOI: 10.1046/J.1365-2443.1999.00239.X  0.677
1999 Loros JJ. Time at the end of the millennium: the Neurospora clock. Current Opinion in Microbiology. 1: 698-706. PMID 10066551 DOI: 10.1016/S1369-5274(98)80118-5  0.508
1999 Duffield GE, Wahleithner JA, Best JD, Schwartz WJ, Loros JJ, Dunlap JC. Application of microarray technology to identify novel components of the mammalian circadian clock Nature Genetics. 23: 42-42. DOI: 10.1038/14297  0.7
1998 Liu Y, Merrow M, Loros JJ, Dunlap JC. How temperature changes reset a circadian oscillator. Science (New York, N.Y.). 281: 825-9. PMID 9694654 DOI: 10.1126/Science.281.5378.825  0.634
1998 Luo C, Loros JJ, Dunlap JC. Nuclear localization is required for function of the essential clock protein FRQ Embo Journal. 17: 1228-1235. PMID 9482720 DOI: 10.1093/Emboj/17.5.1228  0.647
1998 Shinohara ML, Loros JJ, Dunlap JC. Glyceraldehyde-3-phosphate dehydrogenase is regulated on a daily basis by the circadian clock Journal of Biological Chemistry. 273: 446-452. PMID 9417102 DOI: 10.1074/Jbc.273.1.446  0.689
1997 Shigeyoshi Y, Taguchi K, Yamamoto S, Takekida S, Yan L, Tei H, Moriya T, Shibata S, Loros JJ, Dunlap JC, Okamura H. Light-induced resetting of a mammalian circadian clock is associated with rapid induction of the mPer1 transcript Cell. 91: 1043-1053. PMID 9428526 DOI: 10.1016/S0092-8674(00)80494-8  0.692
1997 Liu Y, Garceau NY, Loros JJ, Dunlap JC. Thermally regulated translational control of FRQ mediates aspects of temperature responses in the Neurospora circadian clock Cell. 89: 477-486. PMID 9150147 DOI: 10.1016/S0092-8674(00)80228-7  0.612
1997 Garceau NY, Liu Y, Loros JJ, Dunlap JC. Alternative initiation of translation and time-specific phosphorylation yield multiple forms of the essential clock protein FREQUENCY Cell. 89: 469-476. PMID 9150146 DOI: 10.1016/S0092-8674(00)80227-5  0.677
1997 Crosthwaite SK, Dunlap JC, Loros JJ. Neurospora wc-1 and wc-2: Transcription, photoresponses, and the origins of circadian rhythmicity Science. 276: 763-769. PMID 9115195 DOI: 10.1126/Science.276.5313.763  0.729
1996 Dunlap JC, Loros JJ, Merrow M, Crosthwaite S, Bell-Pedersen D, Garceau N, Shinohara M, Cho H, Luo C. The genetic and molecular dissection of a prototypic circadian system. Progress in Brain Research. 111: 11-27. PMID 8990904 DOI: 10.1016/S0079-6123(08)60397-0  0.678
1996 Bell-Pedersen D, Shinohara ML, Loros JJ, Dunlap JC. Circadian clock-controlled genes isolated from Neurospora crassa are late night- to early morning-specific Proceedings of the National Academy of Sciences of the United States of America. 93: 13096-13101. PMID 8917550 DOI: 10.1073/Pnas.93.23.13096  0.699
1996 Bell-Pedersen D, Dunlap JC, Loros JJ. Distinct cis-acting elements mediate clock, light, and developmental regulation of the Neurospora crassa eas (ccg-2) gene Molecular and Cellular Biology. 16: 513-521. PMID 8552078 DOI: 10.1128/Mcb.16.2.513  0.693
1996 Dunlap JC, Sachs M, Loros J. A recommendation for naming proteins in Neurospora Fungal Genetics Reports. 43: 72. DOI: 10.4148/1941-4765.1326  0.516
1996 Bell-Pedersen D, Garceau N, Loros JJ. Circadian rhythms in fungi Journal of Genetics. 75: 387-401. DOI: 10.1007/Bf02966317  0.561
1995 Arpaia G, Loros JJ, Dunlap JC, Morelli G, Macino G. Light induction of the clock-controlled gene ccg-1 is not transduced through the circadian clock in Neurospora crassa Mgg Molecular &Amp; General Genetics. 247: 157-163. PMID 7753024 DOI: 10.1007/Bf00705645  0.722
1995 Dunlap JC, Loros JJ, Aronson BD, Merrow M, Crosthwaite S, Bell-Pedersen D, Johnson K, Lindgren K, Garceau NY. The genetic basis of the circadian clock: identification of frq and FRQ as clock components in Neurospora. Ciba Foundation Symposium. 183: 3-17; discussion 17-. PMID 7656691 DOI: 10.1002/9780470514597.ch2  0.647
1995 Crosthwaite SK, Loros JJ, Dunlap JC. Light-induced resetting of a circadian clock is mediated by a rapid increase in frequency transcript Cell. 81: 1003-1012. PMID 7600569 DOI: 10.1016/S0092-8674(05)80005-4  0.709
1995 Loros J. The molecular basis of the Neurospora clock Seminars in Neuroscience. 7: 3-13. DOI: 10.1016/1044-5765(95)90012-8  0.543
1994 Aronson BD, Johnson KA, Loros JJ, Dunlap JC. Negative feedback defining a circadian clock: Autoregulation of the clock gene frequency Science. 263: 1578-1584. PMID 8128244 DOI: 10.1126/Science.8128244  0.703
1994 Aronson BD, Lindgren KM, Dunlap JC, Loros JJ. An efficient method for gene disruption in Neurospora crassa Mgg Molecular &Amp; General Genetics. 242: 490-494. PMID 8121407 DOI: 10.1007/Bf00281802  0.561
1993 Arpaia G, Loros JJ, Dunlap JC, Morelli G, Macino G. The interplay of light and the circadian clock: Independent dual regulation of clock-controlled gene ccg-2(eas) Plant Physiology. 102: 1299-1305. PMID 8278550 DOI: 10.1104/Pp.102.4.1299  0.715
1992 Bell-Pedersen D, Dunlap JC, Loros JJ. The Neurospora circadian clock-controlled gene, ccg-2, is allelic to eas and encodes, a fungal hydrophobin required for formation of the conidial rodlet layer Genes and Development. 6: 2382-2394. PMID 1459460 DOI: 10.1101/Gad.6.12A.2382  0.701
1991 Loros JJ, Dunlap JC. Neurospora crassa clock-controlled genes are regulated at the level of transcription Molecular and Cellular Biology. 11: 558-563. PMID 1824715 DOI: 10.1128/Mcb.11.1.558  0.689
1989 Loros JJ, Denome SA, Dunlap JC. Molecular cloning of genes under control of the circadian clock in Neurospora Science. 243: 385-388. PMID 2563175 DOI: 10.1126/Science.2563175  0.654
1986 Loros JJ, Feldman JF. Loss of Temperature Compensation of Circadian Period Length in the frq-9 Mutant of Neurospora crassa Journal of Biological Rhythms. 1: 187-198. PMID 2980965 DOI: 10.1177/074873048600100302  0.608
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