☰

Lata Balakrishnan, Ph.D. - Publications

Affiliations: 
2014- Biology Indiana University Purdue University Indianapolis 
Area:
Biochemistry, Molecular Biology
Website:
https://science.iupui.edu/people/balakrishnan-lata
Tree Info Similar researchers PubMed Report error

40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Ononye OE, Sausen CW, Bochman ML, Balakrishnan L. Dynamic regulation of Pif1 acetylation is crucial to the maintenance of genome stability. Current Genetics. PMID 33079209 DOI: 10.1007/s00294-020-01116-5  0.414
2020 Ononye OE, Sausen CW, Balakrishnan L, Bochman ML. Lysine Acetylation Regulates the Activity of Nuclear Pif1. The Journal of Biological Chemistry. PMID 32878983 DOI: 10.1074/Jbc.Ra120.015164  0.785
2020 Williams GM, Petrides AK, Balakrishnan L, Surtees JA. Tracking Expansions of Stable and Threshold Length Trinucleotide Repeat Tracts In Vivo and In Vitro Using Saccharomyces cerevisiae. Methods in Molecular Biology (Clifton, N.J.). 2056: 25-68. PMID 31586340 DOI: 10.1007/978-1-4939-9784-8_3  0.402
2020 Milavetz B, Rowbotham K, Haugen J, Diaz AR, Balakrishnan L. Nucleosome sliding, histone modifications, and the epigenetic regulation of the Simian Virus 40 life cycle The Faseb Journal. 34: 1-1. DOI: 10.1096/Fasebj.2020.34.S1.04019  0.716
2019 Ononye OE, Njeri CW, Balakrishnan L. Analysis of DNA Processing Enzyme FEN1 and Its Regulation by Protein Lysine Acetylation. Methods in Molecular Biology (Clifton, N.J.). 1983: 207-224. PMID 31087300 DOI: 10.1007/978-1-4939-9434-2_12  0.745
2019 Njeri CW, Ononye OE, Balakrishnan L. Quantification of In Vitro Protein Lysine Acetylation by Reversed Phase HPLC. Methods in Molecular Biology (Clifton, N.J.). 1983: 49-56. PMID 31087292 DOI: 10.1007/978-1-4939-9434-2_4  0.726
2018 Kumar MA, Kasti K, Balakrishnan L, Milavetz B. Directed Nucleosome Sliding in SV40 Minichromosomes During the Formation of the Virus Particle Exposes DNA Sequences Required for Early Transcription. Journal of Virology. PMID 30518654 DOI: 10.1128/Jvi.01678-18  0.74
2017 Balakrishnan L, Milavetz B. Epigenetic Regulation of Viral Biological Processes. Viruses. 9. PMID 29149060 DOI: 10.3390/V9110346  0.738
2017 Balakrishnan L, Milavetz B. Epigenetic Analysis of SV40 Minichromosomes. Current Protocols in Microbiology. 46: 14F.3.1-14F.3.26. PMID 28800155 DOI: 10.1002/Cpmc.35  0.715
2017 Kumar MA, Christensen K, Woods B, Dettlaff A, Perley D, Scheidegger A, Balakrishnan L, Milavetz B. Nucleosome positioning in the regulatory region of SV40 chromatin correlates with the activation and repression of early and late transcription during infection. Virology. 503: 62-69. PMID 28126638 DOI: 10.1016/J.Virol.2016.12.023  0.713
2017 Balliano A, Hao F, Njeri C, Balakrishnan L, Hayes JJ. HMGB1 Stimulates Activity of Polymerase β on Nucleosome Substrates. Biochemistry. PMID 28098985 DOI: 10.1021/Acs.Biochem.6B00569  0.808
2016 Piekna-Przybylska D, Bambara RA, Balakrishnan L. Acetylation regulates DNA repair mechanisms in human cells. Cell Cycle (Georgetown, Tex.). 0. PMID 27104361 DOI: 10.1080/15384101.2016.1176815  0.644
2015 Milavetz BI, Balakrishnan L. Viral epigenetics. Methods in Molecular Biology (Clifton, N.J.). 1238: 569-96. PMID 25421681 DOI: 10.1007/978-1-4939-1804-1_30  0.732
2014 Ngo GH, Balakrishnan L, Dubarry M, Campbell JL, Lydall D. The 9-1-1 checkpoint clamp stimulates DNA resection by Dna2-Sgs1 and Exo1. Nucleic Acids Research. 42: 10516-28. PMID 25122752 DOI: 10.1093/Nar/Gku746  0.479
2013 Milavetz B, Kallestad L, Woods E, Christensen K, Gefroh A, Balakrishnan L. Erratum: Transcription and replication result in distinct epigenetic marks following repression of early gene expression. Frontiers in Genetics. 4: 259. PMID 24348514 DOI: 10.3389/fgene.2013.00259  0.669
2013 Kallestad L, Woods E, Christensen K, Gefroh A, Balakrishnan L, Milavetz B. Transcription and replication result in distinct epigenetic marks following repression of early gene expression. Frontiers in Genetics. 4: 140. PMID 23914205 DOI: 10.3389/Fgene.2013.00140  0.741
2013 Balakrishnan L, Bambara RA. Flap endonuclease 1. Annual Review of Biochemistry. 82: 119-38. PMID 23451868 DOI: 10.1146/Annurev-Biochem-072511-122603  0.665
2013 Balakrishnan L, Bambara RA. Okazaki fragment metabolism. Cold Spring Harbor Perspectives in Biology. 5. PMID 23378587 DOI: 10.1101/Cshperspect.A010173  0.67
2012 Kantartzis A, Williams GM, Balakrishnan L, Roberts RL, Surtees JA, Bambara RA. Msh2-Msh3 interferes with Okazaki fragment processing to promote trinucleotide repeat expansions. Cell Reports. 2: 216-22. PMID 22938864 DOI: 10.1016/J.Celrep.2012.06.020  0.787
2012 Gloor JW, Balakrishnan L, Campbell JL, Bambara RA. Biochemical analyses indicate that binding and cleavage specificities define the ordered processing of human Okazaki fragments by Dna2 and FEN1. Nucleic Acids Research. 40: 6774-86. PMID 22570407 DOI: 10.1093/Nar/Gks388  0.788
2012 Milavetz B, Kallestad L, Gefroh A, Adams N, Woods E, Balakrishnan L. Virion-mediated transfer of SV40 epigenetic information. Epigenetics. 7: 528-34. PMID 22507897 DOI: 10.4161/Epi.20057  0.747
2012 Miller AS, Balakrishnan L, Buncher NA, Opresko PL, Bambara RA. Telomere proteins POT1, TRF1 and TRF2 augment long-patch base excision repair in vitro. Cell Cycle (Georgetown, Tex.). 11: 998-1007. PMID 22336916 DOI: 10.4161/Cc.11.5.19483  0.657
2011 Balakrishnan L, Bambara RA. The changing view of Dna2. Cell Cycle (Georgetown, Tex.). 10: 2620-1. PMID 21829100 DOI: 10.4161/Cc.10.16.16545  0.622
2011 Fortini BK, Pokharel S, Polaczek P, Balakrishnan L, Bambara RA, Campbell JL. Characterization of the endonuclease and ATP-dependent flap endo/exonuclease of Dna2. The Journal of Biological Chemistry. 286: 23763-70. PMID 21572043 DOI: 10.1074/Jbc.M111.243071  0.676
2011 Balakrishnan L, Bambara RA. Eukaryotic lagging strand DNA replication employs a multi-pathway mechanism that protects genome integrity. The Journal of Biological Chemistry. 286: 6865-70. PMID 21177245 DOI: 10.1074/Jbc.R110.209502  0.672
2010 Balakrishnan L, Polaczek P, Pokharel S, Campbell JL, Bambara RA. Dna2 exhibits a unique strand end-dependent helicase function. The Journal of Biological Chemistry. 285: 38861-8. PMID 20929864 DOI: 10.1074/Jbc.M110.165191  0.675
2010 Gloor JW, Balakrishnan L, Bambara RA. Flap endonuclease 1 mechanism analysis indicates flap base binding prior to threading. The Journal of Biological Chemistry. 285: 34922-31. PMID 20739288 DOI: 10.1074/Jbc.M110.165902  0.745
2010 Balakrishnan L, Milavetz B. Decoding the histone H4 lysine 20 methylation mark. Critical Reviews in Biochemistry and Molecular Biology. 45: 440-52. PMID 20735237 DOI: 10.3109/10409238.2010.504700  0.723
2010 Henry RA, Balakrishnan L, Ying-Lin ST, Campbell JL, Bambara RA. Components of the secondary pathway stimulate the primary pathway of eukaryotic Okazaki fragment processing. The Journal of Biological Chemistry. 285: 28496-505. PMID 20628185 DOI: 10.1074/Jbc.M110.131870  0.801
2010 Balakrishnan L, Gefroh A, Milavetz B. Histone H4 lysine 20 mono- and tri-methylation define distinct biological processes in SV40 minichromosomes. Cell Cycle (Georgetown, Tex.). 9: 1320-32. PMID 20404477 DOI: 10.4161/Cc.9.7.11123  0.72
2010 Balakrishnan L, Gloor JW, Bambara RA. Reconstitution of eukaryotic lagging strand DNA replication. Methods (San Diego, Calif.). 51: 347-57. PMID 20178844 DOI: 10.1016/J.Ymeth.2010.02.017  0.793
2010 Balakrishnan L, Stewart J, Polaczek P, Campbell JL, Bambara RA. Acetylation of Dna2 endonuclease/helicase and flap endonuclease 1 by p300 promotes DNA stability by creating long flap intermediates. The Journal of Biological Chemistry. 285: 4398-404. PMID 20019387 DOI: 10.1074/Jbc.M109.086397  0.81
2009 Balakrishnan L, Milavetz B. Dual agarose magnetic (DAM) ChIP. Bmc Research Notes. 2: 250. PMID 20003449 DOI: 10.1186/1756-0500-2-250  0.718
2009 Balakrishnan L, Brandt PD, Lindsey-Boltz LA, Sancar A, Bambara RA. Long patch base excision repair proceeds via coordinated stimulation of the multienzyme DNA repair complex. The Journal of Biological Chemistry. 284: 15158-72. PMID 19329425 DOI: 10.1074/Jbc.M109.000505  0.626
2008 Balakrishnan L, Milavetz B. HDAC inhibitors stimulate viral transcription by multiple mechanisms. Virology Journal. 5: 43. PMID 18353181 DOI: 10.1186/1743-422X-5-43  0.712
2007 Balakrishnan L, Milavetz B. Histone hyperacetylation during SV40 transcription is regulated by p300 and RNA polymerase II translocation. Journal of Molecular Biology. 371: 1022-37. PMID 17658552 DOI: 10.1016/J.Jmb.2007.06.080  0.693
2007 Balakrishnan L, Milavetz B. Histone hyperacetylation in the coding region of chromatin undergoing transcription in SV40 minichromosomes is a dynamic process regulated directly by the presence of RNA polymerase II. Journal of Molecular Biology. 365: 18-30. PMID 17055528 DOI: 10.1016/J.Jmb.2006.09.044  0.702
2006 Balakrishnan L, Clauson R, Weiland T, Bianco M, Milavetz B. Sexually transmitted Human Papillomavirus type variations resulting in high grade cervical dysplasia in North-East North Dakota and North-West Minnesota. Virology Journal. 3: 46. PMID 16776841 DOI: 10.1186/1743-422X-3-46  0.623
2006 Balakrishnan L, Milavetz B. Reorganization of RNA polymerase II on the SV40 genome occurs coordinately with the early to late transcriptional switch. Virology. 345: 31-43. PMID 16242748 DOI: 10.1016/J.Virol.2005.09.039  0.686
2005 Balakrishnan L, Milavetz B. Programmed remodeling of hyperacetylated histone H4 and H3 organization on the SV40 genome during lytic infection. Virology. 334: 111-23. PMID 15749127 DOI: 10.1016/J.Virol.2005.01.025  0.677
Show low-probability matches.