Hironori Funabiki, Ph.D. - Publications

Affiliations: 
Laboratory of Chromosome & Cell Biology Rockefeller University, New York, NY, United States 
Website:
http://www.rockefeller.edu/research/faculty/labheads/HironoriFunabiki/

48/64 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Di Tommaso E, de Turris V, Choppakatla P, Funabiki H, Giunta S. Visualization of the three-dimensional structure of the human centromere in mitotic chromosomes by super-resolution microscopy. Molecular Biology of the Cell. mbcE22080332. PMID 36947236 DOI: 10.1091/mbc.E22-08-0332  0.316
2021 Arimura Y, Shih RM, Froom R, Funabiki H. Structural features of nucleosomes in interphase and metaphase chromosomes. Molecular Cell. PMID 34478647 DOI: 10.1016/j.molcel.2021.08.010  0.323
2021 Choppakatla P, Dekker B, Cutts EE, Vannini A, Dekker J, Funabiki H. Linker histone H1.8 inhibits chromatin binding of condensins and DNA topoisomerase II to tune chromosome length and individualization. Elife. 10. PMID 34406118 DOI: 10.7554/eLife.68918  0.335
2021 Giunta S, Hervé S, White RR, Wilhelm T, Dumont M, Scelfo A, Gamba R, Wong CK, Rancati G, Smogorzewska A, Funabiki H, Fachinetti D. CENP-A chromatin prevents replication stress at centromeres to avoid structural aneuploidy. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33653953 DOI: 10.1073/pnas.2015634118  0.349
2020 Kujirai T, Zierhut C, Takizawa Y, Kim R, Negishi L, Uruma N, Hirai S, Funabiki H, Kurumizaka H. Structural basis for the inhibition of cGAS by nucleosomes. Science (New York, N.Y.). PMID 32912999 DOI: 10.1126/Science.Abd0237  0.348
2020 Zierhut C, Funabiki H. Regulation and Consequences of cGAS Activation by Self-DNA. Trends in Cell Biology. PMID 32546434 DOI: 10.1016/J.Tcb.2020.05.006  0.339
2019 Zierhut C, Yamaguchi N, Paredes M, Luo JD, Carroll T, Funabiki H. The Cytoplasmic DNA Sensor cGAS Promotes Mitotic Cell Death. Cell. 178: 302-315.e23. PMID 31299200 DOI: 10.1016/J.Cell.2019.05.035  0.404
2019 Funabiki H. Correcting aberrant kinetochore microtubule attachments: a hidden regulation of Aurora B on microtubules. Current Opinion in Cell Biology. 58: 34-41. PMID 30684807 DOI: 10.1016/J.Ceb.2018.12.007  0.508
2018 Unoki M, Funabiki H, Velasco G, Francastel C, Sasaki H. CDCA7 and HELLS mutations undermine nonhomologous end joining in centromeric instability syndrome. The Journal of Clinical Investigation. PMID 30307408 DOI: 10.1172/Jci99751  0.413
2018 Funabiki H, Jenness C, Zierhut C. Nucleosome-Dependent Pathways That Control Mitotic Progression. Cold Spring Harbor Symposia On Quantitative Biology. PMID 29514983 DOI: 10.1101/Sqb.2017.82.034512  0.522
2018 Jenness C, Wynne DJ, Funabiki H. Protein Immunodepletion and Complementation in Xenopus laevis Egg Extracts. Cold Spring Harbor Protocols. PMID 29382808 DOI: 10.1101/Pdb.Prot097113  0.399
2018 Jenness C, Giunta S, Müller MM, Kimura H, Muir TW, Funabiki H. HELLS and CDCA7 comprise a bipartite nucleosome remodeling complex defective in ICF syndrome. Proceedings of the National Academy of Sciences of the United States of America. PMID 29339483 DOI: 10.1073/Pnas.1717509115  0.422
2017 Wheelock MS, Wynne DJ, Tseng BS, Funabiki H. Dual recognition of chromatin and microtubules by INCENP is important for mitotic progression. The Journal of Cell Biology. PMID 28314740 DOI: 10.1083/Jcb.201609061  0.527
2017 Giunta S, Funabiki H. Integrity of the human centromere DNA repeats is protected by CENP-A, CENP-C, and CENP-T. Proceedings of the National Academy of Sciences of the United States of America. PMID 28167779 DOI: 10.1073/Pnas.1615133114  0.45
2016 Funabiki H. Interphase Positioning of Centromeres Sets Up Spindle Assembly. Developmental Cell. 39: 527-528. PMID 27923119 DOI: 10.1016/J.Devcel.2016.11.014  0.365
2016 van den Boom J, Wolf M, Weimann L, Schulze N, Li F, Kaschani F, Riemer A, Zierhut C, Kaiser M, Iliakis G, Funabiki H, Meyer H. VCP/p97 Extracts Sterically Trapped Ku70/80 Rings from DNA in Double-Strand Break Repair. Molecular Cell. 64: 189-198. PMID 27716483 DOI: 10.1016/J.Molcel.2016.08.037  0.335
2016 Wynne DJ, Funabiki H. Heterogeneous architecture of vertebrate kinetochores revealed by 3D super-resolution fluorescence microscopy. Molecular Biology of the Cell. PMID 27170176 DOI: 10.1091/Mbc.E16-02-0130  0.394
2015 Wynne DJ, Funabiki H. Kinetochore function is controlled by a phospho-dependent coexpansion of inner and outer components. The Journal of Cell Biology. PMID 26347137 DOI: 10.1083/Jcb.201506020  0.473
2015 Zierhut C, Funabiki H. Nucleosome functions in spindle assembly and nuclear envelope formation. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 37: 1074-85. PMID 26222742 DOI: 10.1002/Bies.201500045  0.542
2014 Zierhut C, Jenness C, Kimura H, Funabiki H. Nucleosomal regulation of chromatin composition and nuclear assembly revealed by histone depletion. Nature Structural & Molecular Biology. 21: 617-25. PMID 24952593 DOI: 10.1038/Nsmb.2845  0.39
2014 Xue JZ, Funabiki H. Nuclear assembly shaped by microtubule dynamics. Nucleus (Austin, Tex.). 5: 40-6. PMID 24637392 DOI: 10.4161/Nucl.28168  0.477
2013 Ghenoiu C, Wheelock MS, Funabiki H. Autoinhibition and Polo-dependent multisite phosphorylation restrict activity of the histone H3 kinase Haspin to mitosis. Molecular Cell. 52: 734-45. PMID 24184212 DOI: 10.1016/J.Molcel.2013.10.002  0.403
2013 Xue JZ, Woo EM, Postow L, Chait BT, Funabiki H. Chromatin-bound Xenopus Dppa2 shapes the nucleus by locally inhibiting microtubule assembly. Developmental Cell. 27: 47-59. PMID 24075807 DOI: 10.1016/J.Devcel.2013.08.002  0.484
2013 Funabiki H, Wynne DJ. Making an effective switch at the kinetochore by phosphorylation and dephosphorylation. Chromosoma. 122: 135-58. PMID 23512483 DOI: 10.1007/S00412-013-0401-5  0.491
2013 Postow L, Funabiki H. An SCF complex containing Fbxl12 mediates DNA damage-induced Ku80 ubiquitylation. Cell Cycle (Georgetown, Tex.). 12: 587-95. PMID 23324393 DOI: 10.4161/Cc.23408  0.339
2012 Carmena M, Wheelock M, Funabiki H, Earnshaw WC. The chromosomal passenger complex (CPC): from easy rider to the godfather of mitosis. Nature Reviews. Molecular Cell Biology. 13: 789-803. PMID 23175282 DOI: 10.1038/Nrm3474  0.524
2012 Rivera T, Ghenoiu C, Rodríguez-Corsino M, Mochida S, Funabiki H, Losada A. Xenopus Shugoshin 2 regulates the spindle assembly pathway mediated by the chromosomal passenger complex. The Embo Journal. 31: 1467-79. PMID 22274615 DOI: 10.1038/Emboj.2012.4  0.541
2012 Du J, Kelly AE, Funabiki H, Patel DJ. Structural basis for recognition of H3T3ph and Smac/DIABLO N-terminal peptides by human Survivin. Structure (London, England : 1993). 20: 185-95. PMID 22244766 DOI: 10.1016/J.Str.2011.12.001  0.547
2011 Rosenberg JS, Cross FR, Funabiki H. KNL1/Spc105 recruits PP1 to silence the spindle assembly checkpoint. Current Biology : Cb. 21: 942-7. PMID 21640906 DOI: 10.1016/J.Cub.2011.04.011  0.546
2010 Kelly AE, Ghenoiu C, Xue JZ, Zierhut C, Kimura H, Funabiki H. Survivin reads phosphorylated histone H3 threonine 3 to activate the mitotic kinase Aurora B. Science (New York, N.Y.). 330: 235-9. PMID 20705815 DOI: 10.1126/Science.1189505  0.632
2010 Tseng BS, Tan L, Kapoor TM, Funabiki H. Dual detection of chromosomes and microtubules by the chromosomal passenger complex drives spindle assembly. Developmental Cell. 18: 903-12. PMID 20627073 DOI: 10.1016/J.Devcel.2010.05.018  0.529
2009 Postow L, Woo EM, Chait BT, Funabiki H. Identification of SMARCAL1 as a component of the DNA damage response. The Journal of Biological Chemistry. 284: 35951-61. PMID 19841479 DOI: 10.1074/Jbc.M109.048330  0.385
2009 Kelly AE, Funabiki H. Correcting aberrant kinetochore microtubule attachments: an Aurora B-centric view. Current Opinion in Cell Biology. 21: 51-8. PMID 19185479 DOI: 10.1016/J.Ceb.2009.01.004  0.647
2008 Postow L, Ghenoiu C, Woo EM, Krutchinsky AN, Chait BT, Funabiki H. Ku80 removal from DNA through double strand break-induced ubiquitylation. The Journal of Cell Biology. 182: 467-79. PMID 18678709 DOI: 10.1083/Jcb.200802146  0.356
2008 Woo EM, Fenyo D, Kwok BH, Funabiki H, Chait BT. Efficient identification of phosphorylation by mass spectrometric phosphopeptide fingerprinting. Analytical Chemistry. 80: 2419-25. PMID 18321079 DOI: 10.1021/Ac702059P  0.312
2007 Kelly AE, Sampath SC, Maniar TA, Woo EM, Chait BT, Funabiki H. Chromosomal enrichment and activation of the aurora B pathway are coupled to spatially regulate spindle assembly. Developmental Cell. 12: 31-43. PMID 17199039 DOI: 10.1016/J.Devcel.2006.11.001  0.668
2006 Dormann HL, Tseng BS, Allis CD, Funabiki H, Fischle W. Dynamic regulation of effector protein binding to histone modifications: the biology of HP1 switching. Cell Cycle (Georgetown, Tex.). 5: 2842-51. PMID 17172865 DOI: 10.4161/Cc.5.24.3540  0.395
2005 Fischle W, Tseng BS, Dormann HL, Ueberheide BM, Garcia BA, Shabanowitz J, Hunt DF, Funabiki H, Allis CD. Regulation of HP1-chromatin binding by histone H3 methylation and phosphorylation. Nature. 438: 1116-22. PMID 16222246 DOI: 10.1038/Nature04219  0.4
2005 Funabiki H. Two birds with one stone--dealing with nuclear transport and spindle assembly. Cell. 121: 157-8. PMID 15851021 DOI: 10.1016/J.Cell.2005.04.003  0.378
2004 Sampath SC, Ohi R, Leismann O, Salic A, Pozniakovski A, Funabiki H. The chromosomal passenger complex is required for chromatin-induced microtubule stabilization and spindle assembly. Cell. 118: 187-202. PMID 15260989 DOI: 10.1016/J.Cell.2004.06.026  0.544
2000 Funabiki H, Murray AW. The Xenopus chromokinesin Xkid is essential for metaphase chromosome alignment and must be degraded to allow anaphase chromosome movement. Cell. 102: 411-24. PMID 10966104 DOI: 10.1016/S0092-8674(00)00047-7  0.556
1998 Kumada K, Nakamura T, Nagao K, Funabiki H, Nakagawa T, Yanagida M. Cut1 is loaded onto the spindle by binding to Cut2 and promotes anaphase spindle movement upon Cut2 proteolysis. Current Biology : Cb. 8: 633-41. PMID 9635190 DOI: 10.1016/S0960-9822(98)70250-7  0.5
1997 Funabiki H, Yamano H, Nagao K, Tanaka H, Yasuda H, Hunt T, Yanagida M. Fission yeast Cut2 required for anaphase has two destruction boxes. The Embo Journal. 16: 5977-87. PMID 9312055 DOI: 10.1093/Emboj/16.19.5977  0.501
1996 Funabiki H, Kumada K, Yanagida M. Fission yeast Cut1 and Cut2 are essential for sister chromatid separation, concentrate along the metaphase spindle and form large complexes. The Embo Journal. 15: 6617-28. PMID 8978688 DOI: 10.1002/J.1460-2075.1996.Tb01052.X  0.517
1996 Funabiki H, Yamano H, Kumada K, Nagao K, Hunt T, Yanagida M. Cut2 proteolysis required for sister-chromatid seperation in fission yeast. Nature. 381: 438-41. PMID 8632802 DOI: 10.1038/381438A0  0.551
1994 Chikashige Y, Ding DQ, Funabiki H, Haraguchi T, Mashiko S, Yanagida M, Hiraoka Y. Telomere-led premeiotic chromosome movement in fission yeast. Science (New York, N.Y.). 264: 270-3. PMID 8146661 DOI: 10.1126/Science.8146661  0.561
1993 Funabiki H, Hagan I, Uzawa S, Yanagida M. Cell cycle-dependent specific positioning and clustering of centromeres and telomeres in fission yeast. The Journal of Cell Biology. 121: 961-76. PMID 8388878 DOI: 10.1083/Jcb.121.5.961  0.569
1992 Takahashi K, Murakami S, Chikashige Y, Funabiki H, Niwa O, Yanagida M. A low copy number central sequence with strict symmetry and unusual chromatin structure in fission yeast centromere. Molecular Biology of the Cell. 3: 819-35. PMID 1515677 DOI: 10.1091/Mbc.3.7.819  0.478
Low-probability matches (unlikely to be authored by this person)
2011 Funabiki H. To Cut or NoCut in mitosis. Nature Reviews. Molecular Cell Biology. 12: 463. PMID 21712842 DOI: 10.1038/Nrm3148  0.291
2017 Skamagki M, Correia C, Yeung P, Baslan T, Beck S, Zhang C, Ross CA, Dang L, Liu Z, Giunta S, Chang TP, Wang J, Ananthanarayanan A, Bohndorf M, Bosbach B, ... ... Funabiki H, et al. ZSCAN10 expression corrects the genomic instability of iPSCs from aged donors. Nature Cell Biology. PMID 28846095 DOI: 10.1038/Ncb3598  0.273
2019 Skamagki M, Correia C, Yeung P, Baslan T, Beck S, Zhang C, Ross CA, Dang L, Liu Z, Giunta S, Chang TP, Wang J, Ananthanarayanan A, Bohndorf M, Bosbach B, ... ... Funabiki H, et al. Author Correction: ZSCAN10 expression corrects the genomic instability of iPSCs from aged donors. Nature Cell Biology. PMID 30643186 DOI: 10.1038/S41556-018-0269-Y  0.217
2023 Funabiki H, Wassing IE, Jia Q, Luo JD, Carroll T. Coevolution of the CDCA7-HELLS ICF-related nucleosome remodeling complex and DNA methyltransferases. Biorxiv : the Preprint Server For Biology. PMID 36778482 DOI: 10.1101/2023.01.30.526367  0.208
2023 Funabiki H, Wassing IE, Jia Q, Luo JD, Carroll T. Coevolution of the CDCA7-HELLS ICF-related nucleosome remodeling complex and DNA methyltransferases. Elife. 12. PMID 37769127 DOI: 10.7554/eLife.86721  0.204
2023 Wassing IE, Nishiyama A, Hiruta M, Jia Q, Shikimachi R, Kikuchi A, Sugimura K, Hong X, Chiba Y, Peng J, Jenness C, Nakanishi M, Zhao L, Arita K, Funabiki H. CDCA7 is a hemimethylated DNA adaptor for the nucleosome remodeler HELLS. Biorxiv : the Preprint Server For Biology. PMID 38187757 DOI: 10.1101/2023.12.19.572350  0.198
2023 Yang N, Wang Y, Dai P, Li T, Zierhut C, Tan A, Zhang T, Xiang JZ, Ordureau A, Funabiki H, Chen Z, Deng L. Vaccinia E5 is a major inhibitor of the DNA sensor cGAS. Nature Communications. 14: 2898. PMID 37217469 DOI: 10.1038/s41467-023-38514-5  0.134
2024 Arimura Y, Konishi HA, Funabiki H. MagIC-Cryo-EM: Structural determination on magnetic beads for scarce macromolecules in heterogeneous samples. Biorxiv : the Preprint Server For Biology. PMID 38328033 DOI: 10.1101/2024.01.21.576499  0.12
1995 Urabe M, Mizobuchi N, Funabiki H, Seki E, Okada T, Sakakibara N. A case of liposarcoma originating in the chest wall. Nihon Geka Hokan. Archiv FüR Japanische Chirurgie. 64: 131-8. PMID 8913089  0.056
2005 Okanoue K, Ishida H, Funabiki H, Hamasaki K, Shimakage N, Kawakami A, Wang Z, Abe H. Fabrication and characterization of Bi2Sr2CaCu 2O8+δ stacks by self-planarizing process Physica C: Superconductivity and Its Applications. 426: 1484-1488. DOI: 10.1016/j.physc.2005.01.073  0.053
1967 Uno H, Funabiki H, Irie A, Yoshimura Y. [Synthesis of nicotonic acid derivatives of amino acids, nucleosides, and vitamin B6 groups]. Yakugaku Zasshi : Journal of the Pharmaceutical Society of Japan. 87: 1293-7. PMID 5627005  0.049
1998 Kodakari N, Sakamoto T, Shinkawa K, Funabiki H, Katada N, Niwa M. Molecular-Sieving Gas Sensor Prepared by Chemical Vapor Deposition of Silica on Tin Oxide Using an Organic Template Bulletin of the Chemical Society of Japan. 71: 513-519.  0.019
2021 Arimura Y, Funabiki H. Structural Mechanics of the Alpha-2-Macroglobulin Transformation. Journal of Molecular Biology. 434: 167413. PMID 34942166 DOI: 10.1016/j.jmb.2021.167413  0.019
2004 Ishida H, Okanoue K, Funabiki H, Hamasaki K. Simple growth technique of Bi2Sr2CaCu 2O8+δ single crystals and transport characteristics of intrinsic Josephson junctions Physica C: Superconductivity and Its Applications. 412: 1406-1409. DOI: 10.1016/j.physc.2004.01.174  0.015
2003 Funabiki H, Okanoue K, Takano C, Hamasaki K. Growth conditions and characterization of Bi2Sr 2CaCu2O8 + δ single crystals Journal of Crystal Growth. 259: 85-89. DOI: 10.1016/S0022-0248(03)01578-1  0.01
1999 Sakamoto K, Mizobuchi N, Narumi K, Watabe S, Okuzawa A, Shirota S, Kajiyama Y, Kobayashi S, Hayashida Y, Icatano T, Tsurumaru M, Funabiki H. A case of esophageal cyst excised successfully using laparoscopy Digestive Endoscopy. 11: 358-362.  0.01
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