Joel H. Rothman - Publications

Affiliations: 
University of California, Santa Barbara, Santa Barbara, CA, United States 
Website:
http://www.lifesci.ucsb.edu/mcdb/labs/rothman/labpage.htm

71 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Spickard EA, Joshi PM, Rothman JH. The multipotency-to-commitment transition (MCT) in C. elegans: implications for reprogramming from cells to organs. Febs Letters. PMID 29334121 DOI: 10.1002/1873-3468.12977  1
2016 Alcorn MR, Callander DC, López-Santos A, Torres Cleuren YN, Birsoy B, Joshi PM, Santure AW, Rothman JH. Heterotaxy in Caenorhabditis: widespread natural variation in left-right arrangement of the major organs. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 371. PMID 27821534 DOI: 10.1098/rstb.2015.0404  1
2016 Riddle MR, Spickard EA, Jevince A, Nguyen KC, Hall DH, Joshi PM, Rothman JH. Transorganogenesis and transdifferentiation in C. elegans are dependent on differentiated cell identity. Developmental Biology. PMID 27717645 DOI: 10.1016/j.ydbio.2016.09.020  1
2015 Joshi PM, Rothman JH. NEGotiating Cell Identity through Regulated Cytoplasmic Polyadenylation. Developmental Cell. 34: 1-2. PMID 26151901 DOI: 10.1016/j.devcel.2015.06.022  1
2014 Callander DC, Alcorn MR, Birsoy B, Rothman JH. Natural reversal of left-right gut/gonad asymmetry in C. elegans males is independent of embryonic chirality. Genesis (New York, N.Y. : 2000). 52: 581-7. PMID 24585712 DOI: 10.1002/dvg.22762  1
2013 Riddle MR, Weintraub A, Nguyen KC, Hall DH, Rothman JH. Transdifferentiation and remodeling of post-embryonic C. elegans cells by a single transcription factor. Development (Cambridge, England). 140: 4844-9. PMID 24257624 DOI: 10.1242/dev.103010  1
2012 Downes JC, Birsoy B, Chipman KC, Rothman JH. Handedness of a motor program in C. elegans is independent of left-right body asymmetry. Plos One. 7: e52138. PMID 23300601 DOI: 10.1371/journal.pone.0052138  1
2012 Djabrayan NJ, Dudley NR, Sommermann EM, Rothman JH. Essential role for Notch signaling in restricting developmental plasticity. Genes & Development. 26: 2386-91. PMID 23124064 DOI: 10.1101/gad.199588.112  1
2011 Rothman JH, Singson A. Caenorhabditis elegans: molecular genetics and development. Methods in Cell Biology. 106: xv-xviii. PMID 22220342  1
2010 Sommermann EM, Strohmaier KR, Maduro MF, Rothman JH. Endoderm development in Caenorhabditis elegans: the synergistic action of ELT-2 and -7 mediates the specification→differentiation transition. Developmental Biology. 347: 154-66. PMID 20807527 DOI: 10.1016/j.ydbio.2010.08.020  1
2010 Putzke AP, Rothman JH. Repression of Wnt signaling by a Fer-type nonreceptor tyrosine kinase. Proceedings of the National Academy of Sciences of the United States of America. 107: 16154-9. PMID 20805471 DOI: 10.1073/pnas.1006600107  1
2010 Joshi PM, Riddle MR, Djabrayan NJ, Rothman JH. Caenorhabditis elegans as a model for stem cell biology. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 239: 1539-54. PMID 20419785 DOI: 10.1002/dvdy.22296  1
2009 Witze ES, Field ED, Hunt DF, Rothman JH. C. elegans pur alpha, an activator of end-1, synergizes with the Wnt pathway to specify endoderm. Developmental Biology. 327: 12-23. PMID 19084000 DOI: 10.1016/j.ydbio.2008.11.015  1
2008 Chen L, McCloskey T, Joshi PM, Rothman JH. ced-4 and proto-oncogene tfg-1 antagonistically regulate cell size and apoptosis in C. elegans. Current Biology : Cb. 18: 1025-33. PMID 18635357 DOI: 10.1016/j.cub.2008.06.065  1
2007 Kumar A, Rothman JH. Cell death: hook, line and linker. Current Biology : Cb. 17: R286-9. PMID 17437706 DOI: 10.1016/j.cub.2007.02.032  0.96
2007 Derry WB, Bierings R, van Iersel M, Satkunendran T, Reinke V, Rothman JH. Regulation of developmental rate and germ cell proliferation in Caenorhabditis elegans by the p53 gene network. Cell Death and Differentiation. 14: 662-70. PMID 17186023 DOI: 10.1038/sj.cdd.4402075  1
2007 Maduro MF, Broitman-Maduro G, Mengarelli I, Rothman JH. Maternal deployment of the embryonic SKN-1-->MED-1,2 cell specification pathway in C. elegans. Developmental Biology. 301: 590-601. PMID 16979152 DOI: 10.1016/j.ydbio.2006.08.029  1
2006 Fukuyama M, Rougvie AE, Rothman JH. C. elegans DAF-18/PTEN mediates nutrient-dependent arrest of cell cycle and growth in the germline. Current Biology : Cb. 16: 773-9. PMID 16631584 DOI: 10.1016/j.cub.2006.02.073  0.96
2006 Broitman-Maduro G, Maduro MF, Rothman JH. The Noncanonical Binding Site of the MED-1 GATA Factor Defines Differentially Regulated Target Genes in the C. elegans Mesendoderm (DOI:10.1016/j.devcel.2005.01.014) Developmental Cell. 10: 683. DOI: 10.1016/j.devcel.2006.04.015  1
2005 Maduro MF, Kasmir JJ, Zhu J, Rothman JH. The Wnt effector POP-1 and the PAL-1/Caudal homeoprotein collaborate with SKN-1 to activate C. elegans endoderm development. Developmental Biology. 285: 510-23. PMID 16084508 DOI: 10.1016/j.ydbio.2005.06.022  1
2005 Joshi PM, Rothman JH. Nematode gastrulation: having a BLASTocoel! Current Biology : Cb. 15: R495-8. PMID 16005279 DOI: 10.1016/j.cub.2005.06.030  1
2005 Maduro MF, Hill RJ, Heid PJ, Newman-Smith ED, Zhu J, Priess JR, Rothman JH. Genetic redundancy in endoderm specification within the genus Caenorhabditis. Developmental Biology. 284: 509-22. PMID 15979606 DOI: 10.1016/j.ydbio.2005.05.016  1
2005 Putzke AP, Hikita ST, Clegg DO, Rothman JH. Essential kinase-independent role of a Fer-like non-receptor tyrosine kinase in Caenorhabditis elegans morphogenesis. Development (Cambridge, England). 132: 3185-95. PMID 15958510 DOI: 10.1242/dev.01900  1
2005 Kontani K, Moskowitz IP, Rothman JH. Repression of cell-cell fusion by components of the C. elegans vacuolar ATPase complex. Developmental Cell. 8: 787-94. PMID 15866168 DOI: 10.1016/j.devcel.2005.02.018  1
2005 Kontani K, Rothman JH. Cell fusion: EFF is enough. Current Biology : Cb. 15: R252-4. PMID 15823525 DOI: 10.1016/j.cub.2005.03.020  1
2005 Broitman-Maduro G, Maduro MF, Rothman JH. The noncanonical binding site of the MED-1 GATA factor defines differentially regulated target genes in the C. elegans mesendoderm. Developmental Cell. 8: 427-33. PMID 15737937 DOI: 10.1016/j.devcel.2005.01.014  1
2004 Huyen Y, Jeffrey PD, Derry WB, Rothman JH, Pavletich NP, Stavridi ES, Halazonetis TD. Structural differences in the DNA binding domains of human p53 and its C. elegans ortholog Cep-1. Structure (London, England : 1993). 12: 1237-43. PMID 15242600 DOI: 10.1016/j.str.2004.05.007  1
2004 Reed SI, Rothman JH. Cell division, growth and death Current Opinion in Cell Biology. 16: 599-601. DOI: 10.1016/j.ceb.2004.10.002  1
2003 Bloss TA, Witze ES, Rothman JH. Suppression of CED-3-independent apoptosis by mitochondrial betaNAC in Caenorhabditis elegans. Nature. 424: 1066-71. PMID 12944970 DOI: 10.1038/nature01920  1
2003 Fukuyama M, Gendreau SB, Derry WB, Rothman JH. Essential embryonic roles of the CKI-1 cyclin-dependent kinase inhibitor in cell-cycle exit and morphogenesis in C elegans. Developmental Biology. 260: 273-86. PMID 12885569 DOI: 10.1016/S0012-1606(03)00239-2  1
2003 Putzke AP, Rothman JH. Gastrulation: PARtaking of the bottle. Current Biology : Cb. 13: R223-5. PMID 12646146 DOI: 10.1016/S0960-9822(03)00155-6  1
2002 Koh K, Peyrot SM, Wood CG, Wagmaister JA, Maduro MF, Eisenmann DM, Rothman JH. Cell fates and fusion in the C. elegans vulval primordium are regulated by the EGL-18 and ELT-6 GATA factors -- apparent direct targets of the LIN-39 Hox protein. Development (Cambridge, England). 129: 5171-80. PMID 12399309  1
2002 Maduro MF, Lin R, Rothman JH. Dynamics of a developmental switch: recursive intracellular and intranuclear redistribution of Caenorhabditis elegans POP-1 parallels Wnt-inhibited transcriptional repression. Developmental Biology. 248: 128-42. PMID 12142026 DOI: 10.1006/dbio.2002.0721  1
2002 Witze E, Rothman JH. Cell fusion: an EFFicient sculptor. Current Biology : Cb. 12: R467-9. PMID 12121640 DOI: 10.1016/S0960-9822(02)00948-X  1
2002 Maduro MF, Rothman JH. Making worm guts: the gene regulatory network of the Caenorhabditis elegans endoderm. Developmental Biology. 246: 68-85. PMID 12027435 DOI: 10.1006/dbio.2002.0655  1
2002 Rothman JH. Aging: from radiant youth to an abrupt end. Current Biology : Cb. 12: R239-41. PMID 11937038 DOI: 10.1016/S0960-9822(02)00780-7  1
2002 Kodama Y, Rothman JH, Sugimoto A, Yamamoto M. The stem-loop binding protein CDL-1 is required for chromosome condensation, progression of cell death and morphogenesis in Caenorhabditis elegans. Development (Cambridge, England). 129: 187-96. PMID 11782412  1
2001 Calvo D, Victor M, Gay F, Sui G, Luke MP, Dufourcq P, Wen G, Maduro M, Rothman J, Shi Y. A POP-1 repressor complex restricts inappropriate cell type-specific gene transcription during Caenorhabditis elegans embryogenesis. The Embo Journal. 20: 7197-208. PMID 11742996 DOI: 10.1093/emboj/20.24.7197  1
2001 Walker AK, Rothman JH, Shi Y, Blackwell TK. Distinct requirements for C.elegans TAF(II)s in early embryonic transcription. The Embo Journal. 20: 5269-79. PMID 11566890 DOI: 10.1093/emboj/20.18.5269  1
2001 Derry WB, Putzke AP, Rothman JH. Caenorhabditis elegans p53: role in apoptosis, meiosis, and stress resistance. Science (New York, N.Y.). 294: 591-5. PMID 11557844 DOI: 10.1126/science.1065486  1
2001 Koh K, Rothman JH. ELT-5 and ELT-6 are required continuously to regulate epidermal seam cell differentiation and cell fusion in C. elegans. Development (Cambridge, England). 128: 2867-80. PMID 11532911  1
2001 Maduro MF, Meneghini MD, Bowerman B, Broitman-Maduro G, Rothman JH. Restriction of mesendoderm to a single blastomere by the combined action of SKN-1 and a GSK-3beta homolog is mediated by MED-1 and -2 in C. elegans. Molecular Cell. 7: 475-85. PMID 11463373 DOI: 10.1016/S1097-2765(01)00195-2  1
2001 Heid PJ, Raich WB, Smith R, Mohler WA, Simokat K, Gendreau SB, Rothman JH, Hardin J. The zinc finger protein DIE-1 is required for late events during epithelial cell rearrangement in C. elegans. Developmental Biology. 236: 165-80. PMID 11456452 DOI: 10.1006/dbio.2001.0315  1
2001 Sugimoto A, Kusano A, Hozak RR, Derry WB, Zhu J, Rothman JH. Many genomic regions are required for normal embryonic programmed cell death in Caenorhabditis elegans. Genetics. 158: 237-52. PMID 11333233  1
2000 Kaltenbach L, Horner MA, Rothman JH, Mango SE. The TBP-like factor CeTLF is required to activate RNA polymerase II transcription during C. elegans embryogenesis. Molecular Cell. 6: 705-13. PMID 11030349  1
2000 Shoichet SA, Malik TH, Rothman JH, Shivdasani RA. Action of the Caenorhabditis elegans GATA factor END-1 in Xenopus suggests that similar mechanisms initiate endoderm development in ecdysozoa and vertebrates. Proceedings of the National Academy of Sciences of the United States of America. 97: 4076-81. PMID 10760276 DOI: 10.1073/pnas.97.8.4076  1
1999 Ferguson KC, Rothman JH. Alterations in the conserved SL1 trans-spliced leader of Caenorhabditis elegans demonstrate flexibility in length and sequence requirements in vivo. Molecular and Cellular Biology. 19: 1892-900. PMID 10022876  1
1998 Zhu J, Fukushige T, McGhee JD, Rothman JH. Reprogramming of early embryonic blastomeres into endodermal progenitors by a Caenorhabditis elegans GATA factor. Genes & Development. 12: 3809-14. PMID 9869634  1
1998 Newman-Smith ED, Rothman JH. The maternal-to-zygotic transition in embryonic patterning of Caenorhabditis elegans. Current Opinion in Genetics & Development. 8: 472-80. PMID 9729725 DOI: 10.1016/S0959-437X(98)80120-2  1
1998 Raich WB, Moran AN, Rothman JH, Hardin J. Cytokinesis and midzone microtubule organization in Caenorhabditis elegans require the kinesin-like protein ZEN-4. Molecular Biology of the Cell. 9: 2037-49. PMID 9693365  1
1998 Pekarsky Y, Campiglio M, Siprashvili Z, Druck T, Sedkov Y, Tillib S, Draganescu A, Wermuth P, Rothman JH, Huebner K, Buchberg AM, Mazo A, Brenner C, Croce CM. Nitrilase and Fhit homologs are encoded as fusion proteins in Drosophila melanogaster and Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America. 95: 8744-9. PMID 9671749 DOI: 10.1073/pnas.95.15.8744  1
1997 Zhu J, Hill RJ, Heid PJ, Fukuyama M, Sugimoto A, Priess JR, Rothman JH. end-1 encodes an apparent GATA factor that specifies the endoderm precursor in Caenorhabditis elegans embryos. Genes & Development. 11: 2883-96. PMID 9353257  1
1997 Terns RM, Kroll-Conner P, Zhu J, Chung S, Rothman JH. A deficiency screen for zygotic loci required for establishment and patterning of the epidermis in Caenorhabditis elegans. Genetics. 146: 185-206. PMID 9136010  1
1996 Moskowitz IP, Rothman JH. lin-12 and glp-1 are required zygotically for early embryonic cellular interactions and are regulated by maternal GLP-1 signaling in Caenorhabditis elegans. Development (Cambridge, England). 122: 4105-17. PMID 9012530  1
1996 Ferguson KC, Heid PJ, Rothman JH. The SL1 trans-spliced leader RNA performs an essential embryonic function in Caenorhabditis elegans that can also be supplied by SL2 RNA. Genes & Development. 10: 1543-56. PMID 8666237  1
1995 Sugimoto A, Hozak RR, Nakashima T, Nishimoto T, Rothman JH. dad-1, an endogenous programmed cell death suppressor in Caenorhabditis elegans and vertebrates. The Embo Journal. 14: 4434-41. PMID 7556086  1
1994 Sugimoto A, Friesen PD, Rothman JH. Baculovirus p35 prevents developmentally programmed cell death and rescues a ced-9 mutant in the nematode Caenorhabditis elegans. The Embo Journal. 13: 2023-8. PMID 8187756  1
1994 Gendreau SB, Moskowitz IP, Terns RM, Rothman JH. The potential to differentiate epidermis is unequally distributed in the AB lineage during early embryonic development in C. elegans. Developmental Biology. 166: 770-81. PMID 7813794 DOI: 10.1006/dbio.1994.1355  1
1994 Moskowitz IP, Gendreau SB, Rothman JH. Combinatorial specification of blastomere identity by glp-1-dependent cellular interactions in the nematode Caenorhabditis elegans. Development (Cambridge, England). 120: 3325-38. PMID 7720570  1
1990 Raymond CK, O'Hara PJ, Eichinger G, Rothman JH, Stevens TH. Molecular analysis of the yeast VPS3 gene and the role of its product in vacuolar protein sorting and vacuolar segregation during the cell cycle. The Journal of Cell Biology. 111: 877-92. PMID 2202738  1
1990 Rothman JH, Raymond CK, Gilbert T, O'Hara PJ, Stevens TH. A putative GTP binding protein homologous to interferon-inducible Mx proteins performs an essential function in yeast protein sorting. Cell. 61: 1063-74. PMID 2112425 DOI: 10.1016/0092-8674(90)90070-U  1
1989 Rothman JH, Howald I, Stevens TH. Characterization of genes required for protein sorting and vacuolar function in the yeast Saccharomyces cerevisiae. The Embo Journal. 8: 2057-65. PMID 2676511  1
1989 Roberts CJ, Pohlig G, Rothman JH, Stevens TH. Structure, biosynthesis, and localization of dipeptidyl aminopeptidase B, an integral membrane glycoprotein of the yeast vacuole. The Journal of Cell Biology. 108: 1363-73. PMID 2647766  1
1989 Kane PM, Yamashiro CT, Rothman JH, Stevens TH. Protein sorting in yeast: the role of the vacuolar proton-translocating ATPase. Journal of Cell Science. Supplement. 11: 161-78. PMID 2533204  1
1989 Rothman JH, Yamashiro CT, Kane PM, Stevens TH. Protein targeting to the yeast vacuole. Trends in Biochemical Sciences. 14: 347-50. PMID 2529676 DOI: 10.1016/0968-0004(89)90170-9  1
1989 Rothman JH, Yamashiro CT, Raymond CK, Kane PM, Stevens TH. Acidification of the lysosome-like vacuole and the vacuolar H+-ATPase are deficient in two yeast mutants that fail to sort vacuolar proteins. The Journal of Cell Biology. 109: 93-100. PMID 2526133  1
1987 Valls LA, Hunter CP, Rothman JH, Stevens TH. Protein sorting in yeast: the localization determinant of yeast vacuolar carboxypeptidase Y resides in the propeptide. Cell. 48: 887-97. PMID 3028649 DOI: 10.1016/0092-8674(87)90085-7  1
1986 Rothman JH, Stevens TH. Protein sorting in yeast: mutants defective in vacuole biogenesis mislocalize vacuolar proteins into the late secretory pathway. Cell. 47: 1041-51. PMID 3536126 DOI: 10.1016/0092-8674(86)90819-6  1
1986 Rothman JH, Hunter CP, Valls LA, Stevens TH. Overproduction-induced mislocalization of a yeast vacuolar protein allows isolation of its structural gene. Proceedings of the National Academy of Sciences of the United States of America. 83: 3248-52. PMID 3517855  1
1986 Stevens TH, Rothman JH, Payne GS, Schekman R. Gene dosage-dependent secretion of yeast vacuolar carboxypeptidase Y. The Journal of Cell Biology. 102: 1551-7. PMID 3517002  1
1986 Ammerer G, Hunter CP, Rothman JH, Saari GC, Valls LA, Stevens TH. PEP4 gene of Saccharomyces cerevisiae encodes proteinase A, a vacuolar enzyme required for processing of vacuolar precursors. Molecular and Cellular Biology. 6: 2490-9. PMID 3023936  1
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