Luca Comai - Publications

Affiliations: 
University of Washington, Seattle, Seattle, WA 
Area:
Botany Biology, Cell Biology, Molecular Biology

157 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Sonsungsan P, Nganga ML, Lieberman M, Amundson K, Stewart V, Plaimas K, Comai L, Henry I. A K-mer based Bulked Segregant Analysis approach to map seed traits in unphased heterozygous potato genomes. G3 (Bethesda, Md.). PMID 38366577 DOI: 10.1093/g3journal/jkae035  0.368
2023 Praphasanobol P, Purnama PR, Junbuathong S, Chotechuen S, Moung-Ngam P, Kasettranan W, Paliyavuth C, Comai L, Pongpanich M, Buaboocha T, Chadchawan S. Genome-Wide Association Study of Starch Properties in Local Thai Rice. Plants (Basel, Switzerland). 12. PMID 37765454 DOI: 10.3390/plants12183290  0.325
2023 Tan EH, Ordoñez B, Thondehaalmath T, Seymour DK, Maloof JN, Maruthachalam R, Comai L. Establishment and inheritance of minichromosomes from Arabidopsis haploid induction. Chromosoma. PMID 36964786 DOI: 10.1007/s00412-023-00788-5  0.437
2023 Cárdenas-Conejo Y, Narváez-Zapata JA, Carballo-Uicab VM, Aguilar-Espinosa M, Us-Camas R, Escobar-Turriza P, Comai L, Rivera-Madrid R. Gene expression profile during seed development of accessions varying in bixin pigment. Frontiers in Plant Science. 14: 1066509. PMID 36875614 DOI: 10.3389/fpls.2023.1066509  0.317
2022 Pochon G, Henry IM, Yang C, Lory N, Fernández-Jiménez N, Böwer F, Hu B, Carstens L, Tsai HT, Pradillo M, Comai L, Schnittger A. The Hop1 homolog ASY1 mediates cross-over assurance and interference. Pnas Nexus. 2: pgac302. PMID 36992817 DOI: 10.1093/pnasnexus/pgac302  0.698
2022 Guo W, Comai L, Henry IM. Chromoanagenesis in plants: triggers, mechanisms, and potential impact. Trends in Genetics : Tig. PMID 36055901 DOI: 10.1016/j.tig.2022.08.003  0.685
2022 Guo W, Comai L, Henry IM. Chromoanagenesis in the asy1 meiotic mutant of Arabidopsis. G3 (Bethesda, Md.). PMID 35920777 DOI: 10.1093/g3journal/jkac185  0.71
2022 Kojonna T, Suttiyut T, Khunpolwattana N, Pongpanich M, Suriya-Arunroj D, Comai L, Buaboocha T, Chadchawan S. Identification of a Negative Regulator for Salt Tolerance at Seedling Stage via a Genome-Wide Association Study of Thai Rice Populations. International Journal of Molecular Sciences. 23. PMID 35163767 DOI: 10.3390/ijms23031842  0.375
2022 Kippes N, Tsai H, Lieberman M, Culp D, McCormack B, Wilson RG, Dowd E, Comai L, Henry IM. Author Correction: Diploid mint (M. longifolia) can produce spearmint type oil with a high yield potential. Scientific Reports. 12: 1006. PMID 35027635 DOI: 10.1038/s41598-022-05238-3  0.551
2021 Kippes N, Tsai H, Lieberman M, Culp D, McCormack B, Wilson RG, Dowd E, Comai L, Henry IM. Diploid mint (M. longifolia) can produce spearmint type oil with a high yield potential. Scientific Reports. 11: 23521. PMID 34876628 DOI: 10.1038/s41598-021-02835-6  0.574
2021 Marimuthu MPA, Maruthachalam R, Bondada R, Kuppu S, Tan EH, Britt A, Chan SWL, Comai L. Epigenetically mismatched parental centromeres trigger genome elimination in hybrids. Science Advances. 7: eabk1151. PMID 34797718 DOI: 10.1126/sciadv.abk1151  0.354
2021 Comai L, Amundson KR, Ordoñez B, Zhao X, Braz GT, Jiang J, Henry IM. LD-CNV: rapid and simple discovery of chromosomal translocations using linkage disequilibrium between copy number variable loci. Genetics. 219. PMID 34740239 DOI: 10.1093/genetics/iyab137  0.707
2021 Tsai H, Kippes N, Firl A, Lieberman M, Comai L, Henry IM. Efficient construction of a linkage map and haplotypes for Mentha suaveolens using sequence capture. G3 (Bethesda, Md.). 11. PMID 34544134 DOI: 10.1093/g3journal/jkab232  0.652
2021 Chutimanukul P, Saputro TB, Mahaprom P, Plaimas K, Comai L, Buaboocha T, Siangliw M, Toojinda T, Chadchawan S. Combining Genome and Gene Co-expression Network Analyses for the Identification of Genes Potentially Regulating Salt Tolerance in Rice. Frontiers in Plant Science. 12: 704549. PMID 34512689 DOI: 10.3389/fpls.2021.704549  0.356
2021 Guo W, Comai L, Henry IM. Chromoanagenesis from radiation-induced genome damage in Populus. Plos Genetics. 17: e1009735. PMID 34432802 DOI: 10.1371/journal.pgen.1009735  0.699
2021 Fanelli V, Ngo KJ, Thompson VL, Silva BR, Tsai H, Sabetta W, Montemurro C, Comai L, Harmer SL. A TILLING by sequencing approach to identify induced mutations in sunflower genes. Scientific Reports. 11: 9885. PMID 33972605 DOI: 10.1038/s41598-021-89237-w  0.327
2021 Amundson KR, Ordoñez B, Santayana M, Nganga ML, Henry IM, Bonierbale M, Khan A, Tan EH, Comai L. Rare instances of haploid inducer DNA in potato dihaploids and ploidy-dependent genome instability. The Plant Cell. PMID 33792719 DOI: 10.1093/plcell/koab100  0.72
2021 Tonosaki K, Ono A, Kunisada M, Nishino M, Nagata H, Sakamoto S, Kijima ST, Furuumi H, Nonomura KI, Sato Y, Ohme-Takagi M, Endo M, Comai L, Hatakeyama K, Kawakatsu T, et al. Mutation of the imprinted gene OsEMF2a induces autonomous endosperm development and delayed cellularization in rice. The Plant Cell. 33: 85-103. PMID 33751094 DOI: 10.1093/plcell/koaa006  0.32
2020 Bastiaanse H, Henry IM, Tsai H, Lieberman M, Canning C, Comai L, Groover A. A systems genetics approach to deciphering the effect of dosage variation on leaf morphology in Populus. The Plant Cell. PMID 33793772 DOI: 10.1093/plcell/koaa016  0.732
2020 Ishii T, Juranić M, Maheshwari S, Bustamante FO, Vogt M, Salinas-Gamboa R, Dreissig S, Gursanscky N, How T, Demidov D, Fuchs J, Schubert V, Spriggs A, Vielle-Calzada JP, Comai L, et al. Unequal contribution of two paralogous CENH3 variants in cowpea centromere function. Communications Biology. 3: 775. PMID 33319863 DOI: 10.1038/s42003-020-01507-x  0.369
2020 Punchkhon C, Plaimas K, Buaboocha T, Siangliw JL, Toojinda T, Comai L, De Diego N, Spíchal L, Chadchawan S. Drought-Tolerance Gene Identification Using Genome Comparison and Co-Expression Network Analysis of Chromosome Substitution Lines in Rice. Genes. 11. PMID 33066648 DOI: 10.3390/genes11101197  0.439
2020 Akagi T, Shirasawa K, Nagasaki H, Hirakawa H, Tao R, Comai L, Henry IM. Correction: The persimmon genome reveals clues to the evolution of a lineage-specific sex determination system in plants. Plos Genetics. 16: e1008845. PMID 32453757 DOI: 10.1371/Journal.Pgen.1008845  0.688
2020 Kuppu S, Ron M, Marimuthu MPA, Li G, Huddleson A, Siddeek MH, Terry J, Buchner R, Shabek N, Comai L, Britt AB. A variety of changes, including CRISPR/Cas9 mediated deletions, in CENH3 lead to haploid induction on outcrossing. Plant Biotechnology Journal. PMID 32096293 DOI: 10.1111/Pbi.13365  0.446
2020 Akagi T, Shirasawa K, Nagasaki H, Hirakawa H, Tao R, Comai L, Henry IM. The persimmon genome reveals clues to the evolution of a lineage-specific sex determination system in plants. Plos Genetics. 16: e1008566. PMID 32069274 DOI: 10.1371/Journal.Pgen.1008566  0.753
2020 Dahlhausen KE, Coil DA, Comai L, Henry IM. Flower Power: A Close Look at Plant Reproduction Frontiers For Young Minds. 8. DOI: 10.3389/Frym.2020.00008  0.631
2020 HUNGSAPRUG K, KOJONNA T, SAMLEEPAN M, PUNCHKHON C, UT-KHAO W, KOSITSUP B, KASETTRANUN W, SIANGLIW J, TOOJINDA T, COMAI L, PLAIMAS K, CHADCHAWAN S. Special issue in honour of Prof. Reto J. Strasser - Chlorophyll fluorescence, leaf gas exchange, and genomic analysis of chromosome segment substitution rice lines exposed to drought stress Photosynthetica. 58: 214-227. DOI: 10.32615/ps.2019.144  0.3
2019 Amundson KR, Ordoñez B, Santayana M, Tan EH, Henry IM, Mihovilovich E, Bonierbale M, Comai L. Genomic Outcomes of Haploid Induction Crosses in Potato ( L.). Genetics. PMID 31871130 DOI: 10.1534/Genetics.119.302843  0.744
2019 Khrueasan N, Chutimanukul P, Plaimas K, Buaboocha T, Siangliw M, Toojinda T, Comai L, Chadchawan S. Comparison between the Transcriptomes of 'KDML105' Rice and a Salt-Tolerant Chromosome Segment Substitution Line. Genes. 10. PMID 31554292 DOI: 10.3390/Genes10100742  0.473
2019 Bjerkan KN, Hornslien KS, Johannessen IM, Krabberød AK, van Ekelenburg YS, Kalantarian M, Shirzadi R, Comai L, Brysting AK, Bramsiepe J, Grini PE. Genetic variation and temperature affects hybrid barriers during interspecific hybridization. The Plant Journal : For Cell and Molecular Biology. PMID 31487093 DOI: 10.1111/Tpj.14523  0.537
2019 Comai L, Tan EH. Haploid Induction and Genome Instability. Trends in Genetics : Tig. PMID 31421911 DOI: 10.1016/J.Tig.2019.07.005  0.528
2019 Lekklar C, Suriya-Arunroj D, Pongpanich M, Comai L, Kositsup B, Chadchawan S, Buaboocha T. Comparative Genomic Analysis of Rice with Contrasting Photosynthesis and Grain Production under Salt Stress. Genes. 10. PMID 31349693 DOI: 10.3390/Genes10080562  0.413
2019 Bastiaanse H, Zinkgraf M, Canning C, Tsai H, Lieberman M, Comai L, Henry I, Groover A. A comprehensive genomic scan reveals gene dosage balance impacts on quantitative traits in trees. Proceedings of the National Academy of Sciences of the United States of America. PMID 31213538 DOI: 10.1073/Pnas.1903229116  0.756
2019 Fossi M, Amundson KR, Kuppu S, Britt AB, Comai L. Regeneration of Solanum tuberosum plants from protoplasts induces widespread genome instability. Plant Physiology. PMID 30792232 DOI: 10.1104/Pp.18.00906  0.478
2019 Lekklar C, Pongpanich M, Suriya-Arunroj D, Chinpongpanich A, Tsai H, Comai L, Chadchawan S, Buaboocha T. Genome-wide association study for salinity tolerance at the flowering stage in a panel of rice accessions from Thailand. Bmc Genomics. 20: 76. PMID 30669971 DOI: 10.1186/S12864-018-5317-2  0.434
2018 Boonchai C, Udomchalothorn T, Sripinyowanich S, Comai L, Buaboocha T, Chadchawan S. Rice Overexpressing Reveals Differential Gene Expression Leading to Yield Loss Reduction after Salt Stress at the Booting Stage. International Journal of Molecular Sciences. 19. PMID 30544581 DOI: 10.3390/Ijms19123936  0.306
2018 Yuenyong W, Chinpongpanich A, Comai L, Chadchawan S, Buaboocha T. Downstream components of the calmodulin signaling pathway in the rice salt stress response revealed by transcriptome profiling and target identification. Bmc Plant Biology. 18: 335. PMID 30518322 DOI: 10.1186/S12870-018-1538-4  0.302
2018 Chutimanukul P, Kositsup B, Plaimas K, Buaboocha T, Siangliw M, Toojinda T, Comai L, Chadchawan S. Data in support of photosynthetic responses in a chromosome segment substitution line of 'Khao Dawk Mali 105' rice at seedling stage. Data in Brief. 21: 307-312. PMID 30364694 DOI: 10.1016/J.Dib.2018.09.128  0.424
2018 Comai L. The taming of the shrub. Nature Plants. 4: 742-743. PMID 30287952 DOI: 10.1038/S41477-018-0275-X  0.418
2018 Henry IM, Akagi T, Tao R, Comai L. One Hundred Ways to Invent the Sexes: Theoretical and Observed Paths to Dioecy in Plants. Annual Review of Plant Biology. 69: 553-575. PMID 29719167 DOI: 10.1146/Annurev-Arplant-042817-040615  0.7
2018 Henry IM, Comai L, Tan EH. Detection of Chromothripsis in Plants. Methods in Molecular Biology (Clifton, N.J.). 1769: 119-132. PMID 29564821 DOI: 10.1007/978-1-4939-7780-2_8  0.76
2018 Chutimanukul P, Kositsup B, Plaimas K, Buaboocha T, Siangliw M, Toojinda T, Comai L, Chadchawan S. Photosynthetic responses and identification of salt tolerance genes in a chromosome segment substitution line of ‘Khao dawk Mali 105’ rice Environmental and Experimental Botany. 155: 497-508. DOI: 10.1016/J.Envexpbot.2018.07.019  0.504
2017 Comai L, Maheshwari S, Marimuthu MPA. ​Plant centromeres​. Current Opinion in Plant Biology. 36: 158-167. PMID 28411416 DOI: 10.1016/j.pbi.2017.03.003  0.413
2017 Maheshwari S, Ishii T, Brown CT, Houben A, Comai L. Centromere location in Arabidopsis is unaltered by extreme divergence in CENH3 protein sequence. Genome Research. PMID 28223399 DOI: 10.1101/Gr.214619.116  0.45
2017 Udomchalothorn T, Plaimas K, Sripinyowanich S, Boonchai C, Kojonna T, Chutimanukul P, Comai L, Buaboocha T, Chadchawan S. OsNucleolin1-L Expression in Arabidopsis Enhances Photosynthesis via Transcriptome Modification under Salt Stress Condition. Plant & Cell Physiology. PMID 28204743 DOI: 10.1093/Pcp/Pcx024  0.379
2016 Zinkgraf M, Haiby K, Lieberman MC, Comai L, Henry IM, Groover A. Creation and Genomic Analysis of Irradiation Hybrids in Populus. Current Protocols in Plant Biology. 1: 431-450. PMID 30775870 DOI: 10.1002/cppb.20025  0.728
2016 Akagi T, Henry IM, Kawai T, Comai L, Tao R. Epigenetic Regulation of the Sex Determination Gene MeGI in Polyploid Persimmon. The Plant Cell. PMID 27956470 DOI: 10.1105/Tpc.16.00532  0.673
2016 Jiang WZ, Henry IM, Lynagh PG, Comai L, Cahoon EB, Weeks DP. Significant enhancement of fatty acid composition in seeds of the allohexaploid, Camelina sativa, using CRISPR/Cas9 gene editing. Plant Biotechnology Journal. PMID 27862889 DOI: 10.1111/Pbi.12663  0.654
2016 Huo H, Henry IM, Coppoolse ER, Verhoef-Post M, Schut JW, de Rooij H, Vogelaar A, Joosen RV, Woudenberg L, Comai L, Bradford KJ. Rapid Identification of Lettuce Seed Germination Mutants by Bulked Segregant Analysis and Whole Genome Sequencing. The Plant Journal : For Cell and Molecular Biology. PMID 27406937 DOI: 10.1111/Tpj.13267  0.714
2016 Tan E, Comai L, Henry I. Chromosome Dosage Analysis in Plants Using Whole Genome Sequencing Bio-Protocol. 6. DOI: 10.21769/BIOPROTOC.1854  0.708
2016 Trujillo-Hdz JA, Cárdenas-Conejo Y, Turriza PE, Aguilar-Espinosa M, Carballo-Uicab V, Garza-Caligaris LE, Comai L, Rivera-Madrid R. Functional polymorphism in lycopene beta-cyclase gene as a molecular marker to predict bixin production in Bixa orellana L. (achiote) Molecular Breeding. 36. DOI: 10.1007/S11032-016-0555-Y  0.415
2015 Cárdenas-Conejo Y, Carballo-Uicab V, Lieberman M, Aguilar-Espinosa M, Comai L, Rivera-Madrid R. De novo transcriptome sequencing in Bixa orellana to identify genes involved in methylerythritol phosphate, carotenoid and bixin biosynthesis. Bmc Genomics. 16: 877. PMID 26511010 DOI: 10.1186/S12864-015-2065-4  0.402
2015 Inagaki S, Henry IM, Lieberman MC, Comai L. High-Throughput Analysis of T-DNA Location and Structure Using Sequence Capture. Plos One. 10: e0139672. PMID 26445462 DOI: 10.1371/Journal.Pone.0139672  0.649
2015 Kuppu S, Tan EH, Nguyen H, Rodgers A, Comai L, Chan SW, Britt AB. Point Mutations in Centromeric Histone Induce Post-zygotic Incompatibility and Uniparental Inheritance. Plos Genetics. 11: e1005494. PMID 26352591 DOI: 10.1371/Journal.Pgen.1005494  0.381
2015 Henry IM, Zinkgraf MS, Groover AT, Comai L. A System for Dosage-Based Functional Genomics in Poplar. The Plant Cell. 27: 2370-83. PMID 26320226 DOI: 10.1105/Tpc.15.00349  0.763
2015 Tan EH, Henry IM, Ravi M, Bradnam KR, Mandakova T, Marimuthu MP, Korf I, Lysak MA, Comai L, Chan SW. Catastrophic chromosomal restructuring during genome elimination in plants. Elife. 4. PMID 25977984 DOI: 10.7554/Elife.06516  0.751
2015 Tsai H, Ngo K, Lieberman M, Missirian V, Comai L. Tilling by sequencing. Methods in Molecular Biology (Clifton, N.J.). 1284: 359-80. PMID 25757782 DOI: 10.1007/978-1-4939-2444-8_18  0.35
2015 Burkart-Waco D, Ngo K, Lieberman M, Comai L. Perturbation of parentally biased gene expression during interspecific hybridization. Plos One. 10: e0117293. PMID 25719202 DOI: 10.1371/Journal.Pone.0117293  0.544
2015 Maheshwari S, Tan EH, West A, Franklin FC, Comai L, Chan SW. Naturally occurring differences in CENH3 affect chromosome segregation in zygotic mitosis of hybrids. Plos Genetics. 11: e1004970. PMID 25622028 DOI: 10.1371/Journal.Pgen.1004970  0.531
2015 Tan EH, Henry IM, Ravi M, Bradnam KR, Mandakova T, Marimuthu MP, Korf I, Lysak MA, Comai L, Chan SW. Author response: Catastrophic chromosomal restructuring during genome elimination in plants Elife. DOI: 10.7554/Elife.06516.029  0.725
2015 Tan EH, Henry IM, Ravi M, Bradnam KR, Mandakova T, Marimuthu MPA, Korf I, Lysak MA, Comai L, Chan SWL. Catastrophic chromosomal restructuring during genome elimination in plants Elife. 4. DOI: 10.7554/eLife.06516  0.707
2014 Akagi T, Henry IM, Tao R, Comai L. A y-chromosome-encoded small RNA acts as a sex determinant in persimmons Science. 346: 646-650. PMID 25359977 DOI: 10.1126/Science.1257225  0.708
2014 Ravi M, Marimuthu MP, Tan EH, Maheshwari S, Henry IM, Marin-Rodriguez B, Urtecho G, Tan J, Thornhill K, Zhu F, Panoli A, Sundaresan V, Britt AB, Comai L, Chan SW. A haploid genetics toolbox for Arabidopsis thaliana. Nature Communications. 5: 5334. PMID 25358957 DOI: 10.1038/Ncomms6334  0.703
2014 Comai L. Genome elimination: translating basic research into a future tool for plant breeding Plos Biology. 12: e1001876. PMID 24915001 DOI: 10.1371/Journal.Pbio.1001876  0.348
2014 Henry IM, Nagalakshmi U, Lieberman MC, Ngo KJ, Krasileva KV, Vasquez-Gross H, Akhunova A, Akhunov E, Dubcovsky J, Tai TH, Comai L. Efficient Genome-Wide Detection and Cataloging of EMS-Induced Mutations Using Exome Capture and Next-Generation Sequencing. The Plant Cell. 26: 1382-1397. PMID 24728647 DOI: 10.1105/Tpc.113.121590  0.665
2014 Henry IM, Dilkes BP, Tyagi A, Gao J, Christensen B, Comai L. The BOY NAMED SUE quantitative trait locus confers increased meiotic stability to an adapted natural allopolyploid of Arabidopsis. The Plant Cell. 26: 181-94. PMID 24464296 DOI: 10.1105/Tpc.113.120626  0.842
2014 Udomchalothorn T, Plaimas K, Comai L, Buaboocha T, Chadchawan S. Molecular karyotyping and exome analysis of salt-tolerant rice mutant from somaclonal variation Plant Genome. 7. DOI: 10.3835/Plantgenome2014.04.0016  0.537
2014 Chamnanmanoontham N, Pichayangura R, Comai L, Chadchawan S, Chadcahwan S. A genetic screen of chitosan-resistant mutant in Arabidopsis thaliana The Turkish Journal of Gastroenterology. 7: 51-60. DOI: 10.14456/Tjg.2014.8  0.397
2013 Burkart-Waco D, Ngo K, Dilkes B, Josefsson C, Comai L. Early disruption of maternal-zygotic interaction and activation of defense-like responses in Arabidopsis interspecific crosses. The Plant Cell. 25: 2037-55. PMID 23898028 DOI: 10.1105/Tpc.112.108258  0.807
2013 Comai L. The passionate life of Simon Chan Genome Biology. 14. PMID 23651759 DOI: 10.1186/Gb-2013-14-1-103  0.505
2013 Tsai H, Missirian V, Ngo KJ, Tran RK, Chan SR, Sundaresan V, Comai L. Production of a high-efficiency TILLING population through polyploidization. Plant Physiology. 161: 1604-14. PMID 23417087 DOI: 10.1104/Pp.112.213256  0.387
2013 Cooper JL, Henikoff S, Comai L, Till BJ. TILLING and ecotilling for rice. Methods in Molecular Biology (Clifton, N.J.). 956: 39-56. PMID 23135843 DOI: 10.1007/978-1-62703-194-3_4  0.465
2012 Inácio A, Pinho J, Pereira PM, Comai L, Coelho MM. Global analysis of the small RNA transcriptome in different ploidies and genomic combinations of a vertebrate complex - the Squalius alburnoides Plos One. 7. PMID 22815952 DOI: 10.1371/Journal.Pone.0041158  0.4
2012 Shi X, Ng DWK, Zhang C, Comai L, Ye W, Jeffrey Chen Z. Cis- and trans-regulatory divergence between progenitor species determines gene-expression novelty in Arabidopsis allopolyploids Nature Communications. 3. PMID 22805557 DOI: 10.1038/Ncomms1954  0.403
2012 Seymour DK, Filiault DL, Henry IM, Monson-Miller J, Ravi M, Pang A, Comai L, Chan SW, Maloof JN. Rapid creation of Arabidopsis doubled haploid lines for quantitative trait locus mapping. Proceedings of the National Academy of Sciences of the United States of America. 109: 4227-32. PMID 22371599 DOI: 10.1073/Pnas.1117277109  0.712
2012 Monson-Miller J, Sanchez-Mendez DC, Fass J, Henry IM, Tai TH, Comai L. Reference genome-independent assessment of mutation density using restriction enzyme-phased sequencing. Bmc Genomics. 13: 72. PMID 22333298 DOI: 10.1186/1471-2164-13-72  0.65
2012 Burkart-Waco D, Josefsson C, Dilkes B, Kozloff N, Torjek O, Meyer R, Altmann T, Comai L. Hybrid incompatibility in Arabidopsis is determined by a multiple-locus genetic network Plant Physiology. 158: 801-812. PMID 22135429 DOI: 10.1104/Pp.111.188706  0.825
2011 Missirian V, Comai L, Filkov V. Statistical mutation calling from sequenced overlapping DNA pools in TILLING experiments. Bmc Bioinformatics. 12: 287. PMID 21756356 DOI: 10.1186/1471-2105-12-287  0.394
2011 Tsai H, Howell T, Nitcher R, Missirian V, Watson B, Ngo KJ, Lieberman M, Fass J, Uauy C, Tran RK, Khan AA, Filkov V, Tai TH, Dubcovsky J, Comai L. Discovery of rare mutations in populations: TILLING by sequencing. Plant Physiology. 156: 1257-68. PMID 21531898 DOI: 10.1104/Pp.110.169748  0.39
2011 Tyagi AP, Henry IM, Comai L. Retraction notice to ‘Detection aneuploidy in Arabidopsis thaliana using fluorescent in-situ hybridization (FISH) analysis’. [The South Pacific Journal of Natural and Applied Sciences 29 (2011), 12–16. doi:10.1071/SP11003] The South Pacific Journal of Natural and Applied Sciences. 29: 12. DOI: 10.1071/Sp11003Retract  0.74
2010 Chang PL, Dilkes BP, McMahon M, Comai L, Nuzhdin SV. Homoeolog-specific retention and use in allotetraploid Arabidopsis suecica depends on parent of origin and network partners. Genome Biology. 11: R125. PMID 21182768 DOI: 10.1186/Gb-2010-11-12-R125  0.818
2010 Hutcheon C, Ditt RF, Beilstein M, Comai L, Schroeder J, Goldstein E, Shewmaker CK, Nguyen T, De Rocher J, Kiser J. Polyploid genome of Camelina sativa revealed by isolation of fatty acid synthesis genes Bmc Plant Biology. 10. PMID 20977772 DOI: 10.1186/1471-2229-10-233  0.483
2010 Henry IM, Dilkes BP, Miller ES, Burkart-Waco D, Comai L. Phenotypic consequences of aneuploidy in Arabidopsis thaliana Genetics. 186: 1231-1245. PMID 20876566 DOI: 10.1534/Genetics.110.121079  0.844
2010 Ravi M, Kwong PN, Menorca RM, Valencia JT, Ramahi JS, Stewart JL, Tran RK, Sundaresan V, Comai L, Chan SW. The rapidly evolving centromere-specific histone has stringent functional requirements in Arabidopsis thaliana. Genetics. 186: 461-71. PMID 20628040 DOI: 10.1534/Genetics.110.120337  0.325
2010 Pignatta D, Dilkes BP, Yoo SY, Henry IM, Madlung A, Doerge RW, Jeffrey Chen Z, Comai L. Differential sensitivity of the Arabidopsis thaliana transcriptome and enhancers to the effects of genome doubling. The New Phytologist. 186: 194-206. PMID 20409178 DOI: 10.1111/J.1469-8137.2010.03198.X  0.832
2010 Koning AJ, Rose R, Comai L. Developmental expression of tomato heat-shock cognate protein 80. Plant Physiology. 100: 801-11. PMID 16653061 DOI: 10.1104/Pp.100.2.801  0.338
2010 Nguyen T, Li R, Lum K, Deynze AV, Schroeder J, Hutcheon C, Shewmaker CK, Richards JS, Simmonds D, Roberts J, Comai L, Todaro G, Rocher JD. WITHDRAWN: Seed-Preferred Expression of Arabidopsis REVOLUTA in Brassica napus and Soybean Leads to Increased Seed Yield Plant Science. DOI: 10.1016/J.Plantsci.2010.07.002  0.316
2009 Uauy C, Paraiso F, Colasuonno P, Tran RK, Tsai H, Berardi S, Comai L, Dubcovsky J. A modified TILLING approach to detect induced mutations in tetraploid and hexaploid wheat. Bmc Plant Biology. 9: 115. PMID 19712486 DOI: 10.1186/1471-2229-9-115  0.351
2009 Henry IM, Dilkes BP, Tyagi AP, Lin HY, Comai L. Dosage and parent-of-origin effects shaping aneuploid swarms in A. thaliana Heredity. 103: 458-468. PMID 19603060 DOI: 10.1038/Hdy.2009.81  0.822
2009 Walia H, Josefsson C, Dilkes B, Kirkbride R, Harada J, Comai L. Dosage-Dependent Deregulation of an AGAMOUS-LIKE Gene Cluster Contributes to Interspecific Incompatibility Current Biology. 19: 1128-1132. PMID 19559614 DOI: 10.1016/J.Cub.2009.05.068  0.82
2009 Pignatta D, Comai L. Parental squabbles and genome expression: Lessons from the polyploids Journal of Biology. 8. PMID 19439050 DOI: 10.1186/Jbiol140  0.526
2008 Dilkes BP, Spielman M, Weizbauer R, Watson B, Burkart-Waco D, Scott RJ, Comai L. The maternally expressed WRKY transcription factor TTG2 controls lethality in interploidy crosses of Arabidopsis Plos Biology. 6. PMID 19071961 DOI: 10.1371/Journal.Pbio.0060308  0.789
2008 Pignatta D, Dilkes B, Wroblewski T, Michelmore RW, Comai L. Transgene-induced gene silencing is not affected by a change in ploidy level Plos One. 3. PMID 18725969 DOI: 10.1371/Journal.Pone.0003061  0.803
2008 Cooper JL, Till BJ, Laport RG, Darlow MC, Kleffner JM, Jamai A, El-Mellouki T, Liu S, Ritchie R, Nielsen N, Bilyeu KD, Meksem K, Comai L, Henikoff S. TILLING to detect induced mutations in soybean. Bmc Plant Biology. 8: 9. PMID 18218134 DOI: 10.1186/1471-2229-8-9  0.34
2007 Davison J, Tyagi A, Comai L. Large-scale polymorphism of heterochromatic repeats in the DNA of Arabidopsis thaliana Bmc Plant Biology. 7. PMID 17705842 DOI: 10.1186/1471-2229-7-44  0.82
2007 Henry IM, Dilkes BP, Comai L. Genetic basis for dosage sensitivity in Arabidopsis thaliana Plos Genetics. 3. PMID 17465685 DOI: 10.1371/Journal.Pgen.0030070  0.839
2007 Till BJ, Cooper J, Tai TH, Colowit P, Greene EA, Henikoff S, Comai L. Discovery of chemically induced mutations in rice by TILLING. Bmc Plant Biology. 7: 19. PMID 17428339 DOI: 10.1186/1471-2229-7-19  0.421
2006 Till BJ, Zerr T, Comai L, Henikoff S. A protocol for TILLING and Ecotilling in plants and animals. Nature Protocols. 1: 2465-77. PMID 17406493 DOI: 10.1038/Nprot.2006.329  0.399
2006 Henry IM, Dilkes BP, Comai L. Molecular karyotyping and aneuploidy detection in Arabidopsis thaliana using quantitative fluorescent polymerase chain reaction Plant Journal. 48: 307-319. PMID 16995901 DOI: 10.1111/J.1365-313X.2006.02871.X  0.831
2006 Till BJ, Zerr T, Bowers E, Greene EA, Comai L, Henikoff S. High-throughput discovery of rare human nucleotide polymorphisms by Ecotilling Nucleic Acids Research. 34. PMID 16893952 DOI: 10.1093/Nar/Gkl479  0.33
2006 Josefsson C, Dilkes B, Comai L. Parent-Dependent Loss of Gene Silencing during Interspecies Hybridization Current Biology. 16: 1322-1328. PMID 16824920 DOI: 10.1016/J.Cub.2006.05.045  0.84
2006 Ditt RF, Kerr KF, de Figueiredo P, Delrow J, Comai L, Nester EW. The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. Molecular Plant-Microbe Interactions : Mpmi. 19: 665-81. PMID 16776300 DOI: 10.1094/Mpmi-19-0665  0.448
2006 Till BJ, Colbert T, Codomo C, Enns L, Johnson J, Reynolds SH, Henikoff JG, Greene EA, Steine MN, Comai L, Henikoff S. High-throughput TILLING for Arabidopsis. Methods in Molecular Biology (Clifton, N.J.). 323: 127-35. PMID 16739573 DOI: 10.1385/1-59745-003-0:127  0.363
2006 Marfil CF, Masuelli RW, Davison J, Comai L. Genomic instability in Solanum tuberosum x Solanum kurtzianum interspecific hybrids Genome. 49: 104-113. PMID 16498460 DOI: 10.1139/G05-088  0.812
2006 Comai L, Henikoff S. TILLING: Practical single-nucleotide mutation discovery Plant Journal. 45: 684-694. PMID 16441355 DOI: 10.1111/J.1365-313X.2006.02670.X  0.451
2006 Wang J, Tian L, Lee HS, Wei NE, Jiang H, Watson B, Madlung A, Osborn TC, Doerge RW, Comai L, Chen ZJ. Genomewide nonadditive gene regulation in Arabidopsis allotetraploids. Genetics. 172: 507-17. PMID 16172500 DOI: 10.1534/Genetics.105.047894  0.777
2005 Li B, Conway N, Navarro S, Comai L, Comai L. A conserved and species-specific functional interaction between the Werner syndrome-like exonuclease atWEX and the Ku heterodimer in Arabidopsis. Nucleic Acids Research. 33: 6861-7. PMID 16396834 DOI: 10.1093/Nar/Gki984  0.315
2005 Comai L. The advantages and disadvantages of being polyploid Nature Reviews Genetics. 6: 836-846. PMID 16304599 DOI: 10.1038/Nrg1711  0.534
2005 Comai L, Cartwright RA. A toxic mutator and selection alternative to the non-Mendelian RNA cache hypothesis for hothead reversion. The Plant Cell. 17: 2856-8. PMID 16267378 DOI: 10.1105/Tpc.105.036293  0.303
2005 Enns LC, Kanaoka MM, Torii KU, Comai L, Okada K, Cleland RE. Two callose synthases, GSL1 and GSL5, play an essential and redundant role in plant and pollen development and in fertility. Plant Molecular Biology. 58: 333-49. PMID 16021399 DOI: 10.1007/S11103-005-4526-7  0.438
2005 Henry IM, Dilkes BP, Young K, Watson B, Wu H, Comai L. Aneuploidy and genetic variation in the Arabidopsis thaliana triploid response Genetics. 170: 1979-1988. PMID 15944363 DOI: 10.1534/Genetics.104.037788  0.822
2005 Ditt RF, Nester E, Comai L. The plant cell defense and Agrobacterium tumefaciens Fems Microbiology Letters. 247: 207-213. PMID 15936896 DOI: 10.1016/J.Femsle.2005.05.010  0.41
2005 Wang J, Lee JJ, Tian L, Lee HS, Chen M, Rao S, Wei EN, Doerge RW, Comai L, Chen ZJ. Methods for genome-wide analysis of gene expression changes in polyploids. Methods in Enzymology. 395: 570-96. PMID 15865985 DOI: 10.1016/S0076-6879(05)95030-1  0.521
2005 Madlung A, Tyagi AP, Watson B, Jiang H, Kagochi T, Doerge RW, Martienssen R, Comai L. Genomic changes in synthetic Arabidopsis polyploids. The Plant Journal : For Cell and Molecular Biology. 41: 221-30. PMID 15634199 DOI: 10.1111/J.1365-313X.2004.02297.X  0.806
2005 Henry IM, Dilkes BP, Comai L. Genetic Basis for Dosage Sensitivity in A. thaliana Plos Genetics. DOI: 10.1371/Journal.Pgen.0030070.Eor  0.639
2004 Jeffrey Chen Z, Wang J, Tian L, Lee HS, Wang JJ, Chen M, Lee JJ, Josefsson C, Madlung A, Watson B, Lippman Z, Vaughn M, Chris Pires J, Colot V, Doerge RW, ... ... Comai L, et al. The development of an Arabidopsis model system for genome-wide analysis of polyploidy effects. Biological Journal of the Linnean Society. Linnean Society of London. 82: 689-700. PMID 18079994 DOI: 10.1111/J.1095-8312.2004.00351.X  0.841
2004 Lee HS, Wang J, Tian L, Jiang H, Black MA, Madlung A, Watson B, Lukens L, Pires JC, Wang JJ, Comai L, Osborn TC, Doerge RW, Chen ZJ. Sensitivity of 70-mer oligonucleotides and cDNAs for microarray analysis of gene expression in Arabidopsis and its related species. Plant Biotechnology Journal. 2: 45-57. PMID 17166142 DOI: 10.1046/J.1467-7652.2003.00048.X  0.753
2004 Pontes O, Neves N, Silva M, Lewis MS, Madlung A, Comai L, Viegas W, Pikaard CS. Chromosomal locus rearrangements are a rapid response to formation of the allotetraploid Arabidopsis suecica genome. Proceedings of the National Academy of Sciences of the United States of America. 101: 18240-5. PMID 15604143 DOI: 10.1073/Pnas.0407258102  0.791
2004 Dilkes BP, Comai L. A differential dosage hypothesis for parental effects in seed development Plant Cell. 16: 3174-3180. PMID 15579806 DOI: 10.1105/Tpc.104.161230  0.769
2004 Wang J, Tian L, Madlung A, Lee HS, Chen M, Lee JJ, Watson B, Kagochi T, Comai L, Chen ZJ. Stochastic and epigenetic changes of gene expression in Arabidopsis polyploids. Genetics. 167: 1961-73. PMID 15342533 DOI: 10.1534/Genetics.104.027896  0.771
2004 Madlung A, Comai L. The effect of stress on genome regulation and structure Annals of Botany. 94: 481-495. PMID 15319229 DOI: 10.1093/Aob/Mch172  0.742
2004 Till BJ, Reynolds SH, Weil C, Springer N, Burtner C, Young K, Bowers E, Codomo CA, Enns LC, Odden AR, Greene EA, Comai L, Henikoff S. Discovery of induced point mutations in maize genes by TILLING. Bmc Plant Biology. 4: 12. PMID 15282033 DOI: 10.1186/1471-2229-4-12  0.47
2004 Henikoff S, Till BJ, Comai L. TILLING. Traditional mutagenesis meets functional genomics Plant Physiology. 135: 630-636. PMID 15155876 DOI: 10.1104/Pp.104.041061  0.473
2004 Till BJ, Burtner C, Comai L, Henikoff S. Mismatch cleavage by single-strand specific nucleases Nucleic Acids Research. 32: 2632-2641. PMID 15141034 DOI: 10.1093/Nar/Gkh599  0.327
2004 Comai L, Young K, Till BJ, Reynolds SH, Greene EA, Codomo CA, Enns LC, Johnson JE, Burtner C, Odden AR, Henikoff S. Efficient discovery of DNA polymorphisms in natural populations by Ecotilling. The Plant Journal : For Cell and Molecular Biology. 37: 778-86. PMID 14871304 DOI: 10.1111/J.0960-7412.2003.01999.X  0.374
2003 Henikoff S, Comai L. Single-Nucleotide Mutations for Plant Functional Genomics Annual Review of Plant Biology. 54: 375-401. PMID 14502996 DOI: 10.1146/Annurev.Arplant.54.031902.135009  0.495
2003 Till BJ, Colbert T, Tompa R, Enns LC, Codomo CA, Johnson JE, Reynolds SH, Henikoff JG, Greene EA, Steine MN, Comai L, Henikoff S. High-throughput TILLING for functional genomics. Methods in Molecular Biology (Clifton, N.J.). 236: 205-20. PMID 14501067 DOI: 10.1385/1-59259-413-1:205  0.391
2003 Comai L, Madlung A, Josefsson C, Tyagi A, Chen ZJ. Do the different parental 'heteromes' cause genomic shock in newly formed allopolyploids? Philosophical Transactions of the Royal Society B: Biological Sciences. 358: 1149-1155. PMID 12831481 DOI: 10.1098/Rstb.2003.1305  0.827
2003 Comai L, Tyagi AP, Lysak MA. FISH analysis of meiosis in Arabidopsis allopolyploids Chromosome Research. 11: 217-226. PMID 12769289 DOI: 10.1023/A:1022883709060  0.527
2003 Till BJ, Reynolds SH, Greene EA, Codomo CA, Enns LC, Johnson JE, Burtner C, Odden AR, Young K, Taylor NE, Henikoff JG, Comai L, Henikoff S. Large-scale discovery of induced point mutations with high-throughput TILLING. Genome Research. 13: 524-30. PMID 12618384 DOI: 10.1101/Gr.977903  0.352
2003 Osborn TC, Pires JC, Birchler JA, Auger DL, Chen ZJ, Lee HS, Comai L, Madlung A, Doerge RW, Colot V, Martienssen RA. Understanding mechanisms of novel gene expression in polyploids. Trends in Genetics : Tig. 19: 141-7. PMID 12615008 DOI: 10.1016/S0168-9525(03)00015-5  0.767
2002 Madlung A, Masuelli RW, Watson B, Reynolds SH, Davison J, Comai L. Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids. Plant Physiology. 129: 733-46. PMID 12068115 DOI: 10.1104/Pp.003095  0.8
2002 Talbert PB, Masuelli R, Tyagi AP, Comai L, Henikoff S. Centromeric localization and adaptive evolution of an Arabidopsis histone H3 variant Plant Cell. 14: 1053-1066. PMID 12034896 DOI: 10.1105/Tpc.010425  0.355
2001 Holmes-Davis R, Comai L. The matrix attachment regions (MARS) associated with the Heat Shock Cognate 80 gene (HSC80) of tomato represent specific regulatory elements Molecular Genetics and Genomics. 266: 891-898. PMID 11810265 DOI: 10.1007/S00438-001-0613-X  0.418
2001 Ditt RF, Nester EW, Comai L. Plant gene expression response to Agrobacterium tumefaciens Proceedings of the National Academy of Sciences of the United States of America. 98: 10954-10959. PMID 11535836 DOI: 10.1073/Pnas.191383498  0.421
2001 Colbert T, Till BJ, Tompa R, Reynolds S, Steine MN, Yeung AT, McCallum CM, Comai L, Henikoff S. High-throughput screening for induced point mutations Plant Physiology. 126: 480-484. PMID 11402178 DOI: 10.1104/Pp.126.2.480  0.453
2001 Holmes-Davis R, Payne SR, Comai L. The effects of kinetin and hydroxyurea on the expression of the endogenous and transgenic Heat Shock Cognate 80 (HSC80) Plant Cell Reports. 20: 744-748. DOI: 10.1007/S002990100391  0.338
2000 Comai L, Tyagi AP, Winter K, Holmes-Davis R, Reynolds SH, Stevens Y, Byers B. Phenotypic instability and rapid gene silencing in newly formed arabidopsis allotetraploids. The Plant Cell. 12: 1551-68. PMID 11006331 DOI: 10.1105/Tpc.12.9.1551  0.512
2000 Comai L. Genetic and epigenetic interactions in allopolyploid plants Plant Molecular Biology. 43: 387-399. PMID 10999418 DOI: 10.1023/A:1006480722854  0.601
2000 McCallum CM, Comai L, Greene EA, Henikoff S. Targeting induced local lesions IN genomes (TILLING) for plant functional genomics Plant Physiology. 123: 439-442. PMID 10859174 DOI: 10.1104/Pp.123.2.439  0.447
2000 McCallum CM, Comai L, Greene EA, Henikoff S. Targeted screening for induced mutations Nature Biotechnology. 18: 455-457. PMID 10748531 DOI: 10.1038/74542  0.421
1998 Chen J, Comai L, Pikaard CS. Gene dosage and stochastic effects determine the severity and direction of uniparental ribosomal RNA gene silencing (nucleolar dominance) in Arabidopsis allopolyploids Proceedings of the National Academy of Sciences of the United States of America. 95: 14891-14896. PMID 9843986 DOI: 10.1073/Pnas.95.25.14891  0.457
1998 Holmes-Davis R, Comai L. Nuclear matrix attachment regions and plant gene expression Trends in Plant Science. 3: 91-97. DOI: 10.1016/S1360-1385(98)01198-4  0.362
1996 Chinn AM, Comai L. The heat shock cognate 80 gene of tomato is flanked by matrix attachment regions Plant Molecular Biology. 32: 959-968. PMID 8980546 DOI: 10.1007/Bf00020492  0.415
1996 Chinn AM, Payne SR, Comai L. Variegation and silencing of the Heat Shock Cognate 80 gene are relieved by a bipartite downstream regulatory element. The Plant Journal : For Cell and Molecular Biology. 9: 325-39. PMID 8919910 DOI: 10.1046/J.1365-313X.1996.09030325.X  0.393
1995 Masuelli RW, Tanimoto EY, Brown CR, Comai L. Irregular meiosis in a somatic hybrid between S. bulbocastanum and S. tuberosum detected by species-specific PCR markers and cytological analysis Theoretical and Applied Genetics. 91: 401-408. DOI: 10.1007/Bf00222966  0.453
1993 Comai L. Impact of plant genetic engineering on foods and nutrition Annual Review of Nutrition. 13: 191-215. PMID 8369145 DOI: 10.1146/Annurev.Nu.13.070193.001203  0.395
1992 Koning A, Jones A, Fillatti JJ, Comai L, Lassner MW. Arrest of embryo development in Brassica napus mediated by modified Pseudomonas aeruginosa exotoxin A Plant Molecular Biology. 18: 247-258. PMID 1731987 DOI: 10.1007/Bf00034953  0.439
1991 Koning AJ, Tanimoto EY, Kiehne K, Rost T, Comai L. Cell-specific expression of plant histone H2A genes Plant Cell. 3: 657-665. PMID 1841722 DOI: 10.1105/Tpc.3.7.657  0.339
1991 Lassner MW, Jones A, Daubert S, Comai L. Targeting of T7 RNA polymerase to tobacco nuclei mediated by an SV40 nuclear location signal Plant Molecular Biology. 17: 229-234. PMID 1650616 DOI: 10.1007/Bf00039497  0.324
1990 Comai L, Moran P, Maslyar D. Novel and useful properties of a chimeric plant promoter combining CaMV 35S and MAS elements Plant Molecular Biology. 15: 373-381. PMID 2103458 DOI: 10.1007/Bf00019155  0.366
1987 Fillatti JJ, Kiser J, Rose R, Comai L. Efficient transfer of a glyphosate tolerance gene into tomato using a binary agrobacterium tumefaciens vector Bio/Technology. 5: 726-730. DOI: 10.1038/Nbt0787-726  0.39
1987 Thompson GA, Hiatt WR, Facciotti D, Stalker DM, Comai L. Expression in Plants of a Bacterial Gene Coding for Glyphosate Resistance Weed Science. 35: 19-23. DOI: 10.1017/S0043174500060999  0.428
1987 Fillatti JJ, Sellmer J, McCown B, Haissig B, Comai L. Agrobacterium mediated transformation and regeneration of Populus Mgg Molecular &Amp; General Genetics. 206: 192-199. DOI: 10.1007/Bf00333574  0.369
1985 Comai L, Facciotti D, Hiatt WR, Thompson G, Rose RE, Stalker DM. Expression in plants of a mutant aroA gene from salmonella typhimurium confers tolerance to glyphosate Nature. 317: 741-744. DOI: 10.1038/317741A0  0.445
1984 Comai L, Stalker DM. Impact of genetic engineering on crop protection Crop Protection. 3: 399-408. DOI: 10.1016/0261-2194(84)90022-X  0.378
1983 Comai L, Sen LC, Stalker DM. An Altered aroA Gene Product Confers Resistance to the Herbicide Glyphosate Science. 221: 370-371. PMID 17798892 DOI: 10.1126/Science.221.4608.370  0.327
1982 COMAI L, SURICO G, KOSUGE T. Relation of Plasmid DNA to Indoleacetic Acid Production in Different Strains of Pseudomonas syringae pv. savastanoi Microbiology. 128: 2157-2163. DOI: 10.1099/00221287-128-9-2157  0.586
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