Savithramma P. Dinesh-Kumar - Publications

Yale University, New Haven, CT 
Molecular Biology, Cell Biology

37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Senthil-Kumar M, Wang M, Chang J, Ramegowda V, Del Pozo O, Liu Y, Doraiswamy V, Lee HK, Ryu CM, Wang K, Xu P, Van Eck J, Chakravarthy S, Dinesh-Kumar SP, Martin GB, et al. Virus-induced gene silencing database for phenomics and functional genomics in . Plant Direct. 2: e00055. PMID 31245720 DOI: 10.1002/pld3.55  0.56
2018 Zhang M, Chiang YH, Toruño TY, Lee D, Ma M, Liang X, Lal NK, Lemos M, Lu YJ, Ma S, Liu J, Day B, Dinesh-Kumar SP, Dehesh K, Dou D, et al. The MAP4 Kinase SIK1 Ensures Robust Extracellular ROS Burst and Antibacterial Immunity in Plants. Cell Host & Microbe. 24: 379-391.e5. PMID 30212650 DOI: 10.1016/j.chom.2018.08.007  0.32
2018 Park E, Caplan JL, Dinesh-Kumar SP. Dynamic coordination of plastid morphological change by cytoskeleton for chloroplast-nucleus communication during plant immune responses. Plant Signaling & Behavior. 1-3. PMID 30067472 DOI: 10.1080/15592324.2018.1500064  0.64
2018 Kumar AS, Park E, Nedo A, Alqarni A, Ren L, Hoban K, Modla S, McDonald JH, Kambhamettu C, Dinesh-Kumar SP, Caplan JL. Stromule extension along microtubules coordinated with actin-mediated anchoring guides perinuclear chloroplast movement during innate immunity. Elife. 7. PMID 29338837 DOI: 10.7554/eLife.23625  0.64
2017 Park E, Nedo A, Caplan JL, Dinesh-Kumar SP. Plant-microbe interactions: organelles and the cytoskeleton in action. The New Phytologist. PMID 29250789 DOI: 10.1111/nph.14959  0.64
2017 Zhu M, Jiang L, Bai B, Zhao W, Chen X, Li J, Liu Y, Chen Z, Wang B, Wang C, Wu Q, Shen QH, Dinesh-Kumar SP, Tao X. The Intracellular Immune Receptor Sw-5b Confers Broad-spectrum Resistance to Tospoviruses through Recognition of a Conserved 21-amino-acid Viral Effector Epitope. The Plant Cell. PMID 28814646 DOI: 10.1105/tpc.17.00180  0.56
2017 Ma S, Snyder M, Dinesh-Kumar SP. Discovery of Novel Human Gene Regulatory Modules from Gene Co-expression and Promoter Motif Analysis. Scientific Reports. 7: 5557. PMID 28717181 DOI: 10.1038/s41598-017-05705-2  0.32
2016 Feng B, Ma S, Chen S, Zhu N, Zhang S, Yu B, Yu Y, Le B, Chen X, Dinesh-Kumar SP, Shan L, He P. PARylation of the forkhead-associated domain protein DAWDLE regulates plant immunity. Embo Reports. PMID 27797852 DOI: 10.15252/embr.201642486  0.32
2016 Lal NK, Fisher AJ, Dinesh-Kumar SP. Arabidopsis receptor-like cytoplasmic kinase BIK1: purification, crystallization and X-ray diffraction analysis. Acta Crystallographica. Section F, Structural Biology Communications. 72: 738-742. PMID 27710938 DOI: 10.1107/S2053230X16013522  0.32
2016 Seo E, Woo J, Park E, Bertolani SJ, Siegel JB, Choi D, Dinesh-Kumar SP. Comparative analyses of ubiquitin-like ATG8 and cysteine protease ATG4 autophagy genes in the plant lineage and cross-kingdom processing of ATG8 by ATG4. Autophagy. 0. PMID 27540766 DOI: 10.1080/15548627.2016.1217373  0.32
2016 Burch-Smith TM, Schiff M, Caplan JL, Tsao J, Czymmek K, Dinesh-Kumar SP. Correction: A Novel Role for the TIR Domain in Association with Pathogen-Derived Elicitors. Plos Biology. 14: e1002374. PMID 26807877 DOI: 10.1371/journal.pbio.1002374  1
2015 Suter B, Zhang X, Pesce CG, Mendelsohn AR, Dinesh-Kumar SP, Mao JH. Next-Generation Sequencing for Binary Protein-Protein Interactions. Frontiers in Genetics. 6: 346. PMID 26734059 DOI: 10.3389/fgene.2015.00346  0.32
2015 Caplan JL, Kumar AS, Park E, Padmanabhan MS, Hoban K, Modla S, Czymmek K, Dinesh-Kumar SP. Chloroplast Stromules Function during Innate Immunity. Developmental Cell. 34: 45-57. PMID 26120031 DOI: 10.1016/j.devcel.2015.05.011  0.32
2015 Ma S, Dinesh-Kumar SP. Plant protein kinase substrates identification using protein microarrays. Methods in Molecular Biology (Clifton, N.J.). 1306: 159-65. PMID 25930701 DOI: 10.1007/978-1-4939-2648-0_12  0.32
2015 Ma S, Bohnert HJ, Dinesh-Kumar SP. AtGGM2014, an Arabidopsis gene co-expression network for functional studies. Science China. Life Sciences. 58: 276-86. PMID 25682393 DOI: 10.1007/s11427-015-4803-x  0.32
2014 Manohar M, Tian M, Moreau M, Park SW, Choi HW, Fei Z, Friso G, Asif M, Manosalva P, von Dahl CC, Shi K, Ma S, Dinesh-Kumar SP, O'Doherty I, Schroeder FC, et al. Identification of multiple salicylic acid-binding proteins using two high throughput screens. Frontiers in Plant Science. 5: 777. PMID 25628632 DOI: 10.3389/fpls.2014.00777  0.32
2014 Padmanabhan MS, Dinesh-Kumar SP. The conformational and subcellular compartmental dance of plant NLRs during viral recognition and defense signaling. Current Opinion in Microbiology. 20: 55-61. PMID 24906192 DOI: 10.1016/j.mib.2014.05.003  0.32
2013 Ma S, Shah S, Bohnert HJ, Snyder M, Dinesh-Kumar SP. Incorporating motif analysis into gene co-expression networks reveals novel modular expression pattern and new signaling pathways. Plos Genetics. 9: e1003840. PMID 24098147 DOI: 10.1371/journal.pgen.1003840  0.32
2013 Padmanabhan MS, Ma S, Burch-Smith TM, Czymmek K, Huijser P, Dinesh-Kumar SP. Novel positive regulatory role for the SPL6 transcription factor in the N TIR-NB-LRR receptor-mediated plant innate immunity. Plos Pathogens. 9: e1003235. PMID 23516366 DOI: 10.1371/journal.ppat.1003235  0.32
2012 Ma S, Bachan S, Porto M, Bohnert HJ, Snyder M, Dinesh-Kumar SP. Discovery of stress responsive DNA regulatory motifs in Arabidopsis. Plos One. 7: e43198. PMID 22912824 DOI: 10.1371/journal.pone.0043198  0.32
2012 Bachan S, Dinesh-Kumar SP. Tobacco rattle virus (TRV)-based virus-induced gene silencing. Methods in Molecular Biology (Clifton, N.J.). 894: 83-92. PMID 22678574 DOI: 10.1007/978-1-61779-882-5_6  0.32
2010 Zhu X, Caplan J, Mamillapalli P, Czymmek K, Dinesh-Kumar SP. Function of endoplasmic reticulum calcium ATPase in innate immunity-mediated programmed cell death. The Embo Journal. 29: 1007-18. PMID 20075858 DOI: 10.1038/emboj.2009.402  0.64
2009 Popescu SC, Popescu GV, Snyder M, Dinesh-Kumar SP. Integrated analysis of co-expressed MAP kinase substrates in Arabidopsis thaliana. Plant Signaling & Behavior. 4: 524-7. PMID 19816141 DOI: 10.4161/psb.4.6.8576  0.32
2009 Popescu SC, Popescu GV, Bachan S, Zhang Z, Gerstein M, Snyder M, Dinesh-Kumar SP. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Genes & Development. 23: 80-92. PMID 19095804 DOI: 10.1101/gad.1740009  0.32
2008 Caplan JL, Mamillapalli P, Burch-Smith TM, Czymmek K, Dinesh-Kumar SP. Chloroplastic protein NRIP1 mediates innate immune receptor recognition of a viral effector. Cell. 132: 449-62. PMID 18267075 DOI: 10.1016/j.cell.2007.12.031  1
2007 Seay MD, Dinesh-Kumar SP. Autophagy takes its TOLL on innate immunity. Cell Host & Microbe. 2: 69-70. PMID 18005718 DOI: 10.1016/j.chom.2007.07.008  1
2007 Dong Y, Burch-Smith TM, Liu Y, Mamillapalli P, Dinesh-Kumar SP. A ligation-independent cloning tobacco rattle virus vector for high-throughput virus-induced gene silencing identifies roles for NbMADS4-1 and -2 in floral development. Plant Physiology. 145: 1161-70. PMID 17932306 DOI: 10.1104/pp.107.107391  1
2007 Burch-Smith TM, Dinesh-Kumar SP. The functions of plant TIR domains. Science's Stke : Signal Transduction Knowledge Environment. 2007: pe46. PMID 17726177 DOI: 10.1126/stke.4012007pe46  1
2007 Bhattarai KK, Li Q, Liu Y, Dinesh-Kumar SP, Kaloshian I. The MI-1-mediated pest resistance requires Hsp90 and Sgt1. Plant Physiology. 144: 312-23. PMID 17351050 DOI: 10.1104/pp.107.097246  0.32
2007 Burch-Smith TM, Schiff M, Caplan JL, Tsao J, Czymmek K, Dinesh-Kumar SP. A novel role for the TIR domain in association with pathogen-derived elicitors. Plos Biology. 5: e68. PMID 17298188 DOI: 10.1371/journal.pbio.0050068  1
2006 Burch-Smith TM, Miller JL, Dinesh-Kumar SP. Delivery of dsRNA into Plants by VIGS Methodology. Csh Protocols. 2006. PMID 22485703 DOI: 10.1101/pdb.prot4327  1
2006 Burch-Smith TM, Schiff M, Liu Y, Dinesh-Kumar SP. Efficient virus-induced gene silencing in Arabidopsis. Plant Physiology. 142: 21-7. PMID 16815951 DOI: 10.1104/pp.106.084624  1
2005 Seay MD, Dinesh-Kumar SP. Life after death: are autophagy genes involved in cell death and survival during plant innate immune responses? Autophagy. 1: 185-6. PMID 16874062  1
2005 Soosaar JL, Burch-Smith TM, Dinesh-Kumar SP. Mechanisms of plant resistance to viruses. Nature Reviews. Microbiology. 3: 789-98. PMID 16132037 DOI: 10.1038/nrmicro1239  1
2005 Rubio V, Shen Y, Saijo Y, Liu Y, Gusmaroli G, Dinesh-Kumar SP, Deng XW. An alternative tandem affinity purification strategy applied to Arabidopsis protein complex isolation. The Plant Journal : For Cell and Molecular Biology. 41: 767-78. PMID 15703063 DOI: 10.1111/j.1365-313X.2004.02328.x  0.56
2004 Burch-Smith TM, Anderson JC, Martin GB, Dinesh-Kumar SP. Applications and advantages of virus-induced gene silencing for gene function studies in plants. The Plant Journal : For Cell and Molecular Biology. 39: 734-46. PMID 15315635 DOI: 10.1111/j.1365-313X.2004.02158.x  1
2004 Liu Y, Burch-Smith T, Schiff M, Feng S, Dinesh-Kumar SP. Molecular chaperone Hsp90 associates with resistance protein N and its signaling proteins SGT1 and Rar1 to modulate an innate immune response in plants. The Journal of Biological Chemistry. 279: 2101-8. PMID 14583611 DOI: 10.1074/jbc.M310029200  0.56
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