Ananda L. Roy - Publications

Affiliations: 
Genetics Sackler School of Graduate Biomedical Sciences (Tufts University) 
Area:
Genetics, Cell Biology, Molecular Biology

65 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Singh A, Kaileh M, De S, Mazan-Mamczarz K, Bayarsaihan D, Sen R, Roy AL. Transcription factor TFII-I fine tunes innate properties of B lymphocytes. Frontiers in Immunology. 14: 1067459. PMID 36756127 DOI: 10.3389/fimmu.2023.1067459  0.417
2021 Roy AL. Role of the multifunctional transcription factor TFII-I in DNA damage repair. Dna Repair. 106: 103175. PMID 34280590 DOI: 10.1016/j.dnarep.2021.103175  0.304
2019 Roy AL. Transcriptional Regulation in the Immune System: One Cell at a Time. Frontiers in Immunology. 10: 1355. PMID 31258532 DOI: 10.3389/Fimmu.2019.01355  0.416
2017 Roy AL. Pathophysiology of TFII-I: Old Guard Wearing New Hats. Trends in Molecular Medicine. PMID 28461154 DOI: 10.1016/J.Molmed.2017.04.002  0.458
2015 Fowler T, Garruss AS, Ghosh A, De S, Becker KG, Wood WH, Weirauch MT, Smale ST, Aronow B, Sen R, Roy AL. Divergence of transcriptional landscape occurs early in B cell activation. Epigenetics & Chromatin. 8: 20. PMID 25987903 DOI: 10.1186/S13072-015-0012-X  0.405
2015 Fowler T, Ghatak P, Price DH, Conaway R, Conaway J, Chiang CM, Bradner JE, Shilatifard A, Roy AL. Correction: Regulation of MYC Expression and Differential JQ1 Sensitivity in Cancer Cells. Plos One. 10: e0126328. PMID 25902070 DOI: 10.1371/Journal.Pone.0126328  0.35
2015 Roy AL, Singer DS. Core promoters in transcription: old problem, new insights. Trends in Biochemical Sciences. 40: 165-71. PMID 25680757 DOI: 10.1016/J.Tibs.2015.01.007  0.462
2015 Peña-Hernández R, Marques M, Hilmi K, Zhao T, Saad A, Alaoui-Jamali MA, del Rincon SV, Ashworth T, Roy AL, Emerson BM, Witcher M. Genome-wide targeting of the epigenetic regulatory protein CTCF to gene promoters by the transcription factor TFII-I. Proceedings of the National Academy of Sciences of the United States of America. 112: E677-86. PMID 25646466 DOI: 10.1073/Pnas.1416674112  0.597
2014 Roy AL, Roeder RG. Chromatin and transcriptional tango on the immune dance floor. Frontiers in Immunology. 5: 631. PMID 25566246 DOI: 10.3389/Fimmu.2014.00631  0.539
2014 Schworer SA, Smirnova II, Kurbatova I, Bagina U, Churova M, Fowler T, Roy AL, Degterev A, Poltorak A. Toll-like receptor-mediated down-regulation of the deubiquitinase cylindromatosis (CYLD) protects macrophages from necroptosis in wild-derived mice. The Journal of Biological Chemistry. 289: 14422-33. PMID 24706750 DOI: 10.1074/Jbc.M114.547547  0.334
2014 Fowler T, Ghatak P, Price DH, Conaway R, Conaway J, Chiang CM, Bradner JE, Shilatifard A, Roy AL. Regulation of MYC expression and differential JQ1 sensitivity in cancer cells. Plos One. 9: e87003. PMID 24466310 DOI: 10.1371/Journal.Pone.0087003  0.482
2014 Kritharis A, Fowler T, Dashnamoorthy R, Burgess KE, Beheshti A, Abermil N, Roy A, Hlatky L, Pilichowska M, McNiel E, Evens AM. A Comparative Oncology Study of Canine and Human Genomics and Proteomics in Peripheral T-Cell Lymphoma (PTCL): Examination of Shared Oncogenic Signaling for Biomarker and Therapeutic Target Discovery Blood. 124: 3019-3019. DOI: 10.1182/Blood.V124.21.3019.3019  0.401
2013 Fowler T, Suh H, Buratowski S, Roy AL. Regulation of primary response genes in B cells. The Journal of Biological Chemistry. 288: 14906-16. PMID 23536186 DOI: 10.1074/Jbc.M113.454355  0.482
2013 Chatterjee A, Dutta S, Mukherjee S, Mukherjee N, Dutta A, Mukherjee A, Sinha S, Panda CK, Chaudhuri K, Roy AL, Mukhopadhyay K. Potential contribution of SIM2 and ETS2 functional polymorphisms in Down syndrome associated malignancies. Bmc Medical Genetics. 14: 12. PMID 23343470 DOI: 10.1186/1471-2350-14-12  0.435
2012 Roy AL. Biochemistry and biology of the inducible multifunctional transcription factor TFII-I: 10years later Gene. 492: 32-41. PMID 22037610 DOI: 10.1016/J.Gene.2011.10.030  0.412
2011 Fowler T, Sen R, Roy AL. Regulation of primary response genes. Molecular Cell. 44: 348-60. PMID 22055182 DOI: 10.1016/J.Molcel.2011.09.014  0.459
2011 Roy AL, Sen R, Roeder RG. Enhancer-promoter communication and transcriptional regulation of Igh. Trends in Immunology. 32: 532-9. PMID 21855411 DOI: 10.1016/J.It.2011.06.012  0.569
2009 Lazebnik MB, Tussie-Luna MI, Hinds PW, Roy AL. Williams-Beuren syndrome-associated transcription factor TFII-I regulates osteogenic marker genes. The Journal of Biological Chemistry. 284: 36234-9. PMID 19880526 DOI: 10.1074/Jbc.C109.063115  0.681
2009 Sacristán C, Schattgen SA, Berg LJ, Bunnell SC, Roy AL, Rosenstein Y. Characterization of a novel interaction between transcription factor TFII-I and the inducible tyrosine kinase in T cells. European Journal of Immunology. 39: 2584-95. PMID 19701889 DOI: 10.1002/Eji.200839031  0.427
2009 Ashworth T, Roy AL. Phase specific functions of the transcription factor TFII-I during cell cycle. Cell Cycle (Georgetown, Tex.). 8: 596-605. PMID 19182516 DOI: 10.4161/Cc.8.4.7728  0.429
2009 Enkhmandakh B, Makeyev AV, Erdenechimeg L, Ruddle FH, Chimge NO, Tussie-Luna MI, Roy AL, Bayarsaihan D. Essential functions of the Williams-Beuren syndrome-associated TFII-I genes in embryonic development. Proceedings of the National Academy of Sciences of the United States of America. 106: 181-6. PMID 19109438 DOI: 10.1073/Pnas.0811531106  0.504
2008 Tapia-Páez I, Tammimies K, Massinen S, Roy AL, Kere J. The complex of TFII-I, PARP1, and SFPQ proteins regulates the DYX1C1 gene implicated in neuronal migration and dyslexia Faseb Journal. 22: 3001-3009. PMID 18445785 DOI: 10.1096/Fj.07-104455  0.416
2008 Lazebnik MB, Tussie-Luna MI, Roy AL. Determination and functional analysis of the consensus binding site for TFII-I family member BEN, implicated in Williams-Beuren syndrome Journal of Biological Chemistry. 283: 11078-11082. PMID 18326499 DOI: 10.1074/Jbc.C800049200  0.665
2007 Roy AL. Signal-induced functions of the transcription factor TFII-I Biochimica Et Biophysica Acta - Gene Structure and Expression. 1769: 613-621. PMID 17976384 DOI: 10.1016/J.Bbaexp.2007.10.002  0.532
2007 Ashworth T, Roy AL. Cutting Edge: TFII-I controls B cell proliferation via regulating NF-kappaB. Journal of Immunology (Baltimore, Md. : 1950). 178: 2631-5. PMID 17312101 DOI: 10.4049/Jimmunol.178.5.2631  0.479
2006 Roy AL. Transcription factor TFII-I conducts a cytoplasmic orchestra Acs Chemical Biology. 1: 619-622. PMID 17168565 DOI: 10.1021/Cb6004323  0.383
2006 Hakre S, Tussie-Luna MI, Ashworth T, Novina CD, Settleman J, Sharp PA, Roy AL. Opposing functions of TFII-I spliced isoforms in growth factor-induced gene expression. Molecular Cell. 24: 301-8. PMID 17052463 DOI: 10.1016/J.Molcel.2006.09.005  0.531
2006 Rajaiya J, Nixon JC, Ayers N, Desgranges ZP, Roy AL, Webb CF. Induction of immunoglobulin heavy-chain transcription through the transcription factor bright requires TFII-I Molecular and Cellular Biology. 26: 4758-4768. PMID 16738337 DOI: 10.1128/Mcb.02009-05  0.539
2006 Desgranges ZP, Roy AL. TFII-I: Connecting mitogenic signals to cell cycle regulation Cell Cycle. 5: 356-359. PMID 16479156 DOI: 10.4161/Cc.5.4.2442  0.437
2006 Tussié-Luna MI, Rozo L, Roy AL. Pro-proliferative function of the long isoform of PML-RARα involved in acute promyelocytic leukemia Oncogene. 25: 3375-3386. PMID 16434964 DOI: 10.1038/sj.onc.1209388  0.412
2005 Desgranges ZP, Ahn J, Lazebnik MB, Ashworth T, Lee C, Pestell RC, Rosenberg N, Prives C, Roy AL. Inhibition of TFII-I-dependent cell cycle regulation by p53. Molecular and Cellular Biology. 25: 10940-52. PMID 16314517 DOI: 10.1128/Mcb.25.24.10940-10952.2005  0.666
2005 Ku M, Sokol SY, Wu J, Tussie-Luna MI, Roy AL, Hata A. Positive and negative regulation of the transforming growth factor beta/activin target gene goosecoid by the TFII-I family of transcription factors. Molecular and Cellular Biology. 25: 7144-57. PMID 16055724 DOI: 10.1128/Mcb.25.16.7144-7157.2005  0.576
2005 Hong M, Lin MY, Huang JM, Baumeister P, Hakre S, Roy AL, Lee AS. Transcriptional regulation of the Grp78 promoter by endoplasmic reticulum stress: Role of TFII-I and its tyrosine phosphorylation Journal of Biological Chemistry. 280: 16821-16828. PMID 15664986 DOI: 10.1074/Jbc.M413753200  0.395
2005 Jiang W, Sordella R, Chen GC, Hakre S, Roy AL, Settleman J. An FF domain-dependent protein interaction mediates a signaling pathway for growth factor-induced gene expression Molecular Cell. 17: 23-35. PMID 15629714 DOI: 10.1016/J.Molcel.2004.11.024  0.51
2004 Tantin D, Tussie-Luna MI, Roy AL, Sharp PA. Regulation of immunoglobulin promoter activity by TFII-I class transcription factors. The Journal of Biological Chemistry. 279: 5460-9. PMID 14645227 DOI: 10.1074/Jbc.M311177200  0.483
2004 Sacristán C, Tussié-Luna MI, Logan SM, Roy AL. Mechanism of Bruton's tyrosine kinase-mediated recruitment and regulation of TFII-I. The Journal of Biological Chemistry. 279: 7147-58. PMID 14623887 DOI: 10.1074/Jbc.M303724200  0.463
2003 Bayarsaihan D, Bitchevaia N, Enkhmandakh B, Tussie-Luna MI, Leckman JF, Roy A, Ruddle F. Expression of BEN, a member of TFII-I family of transcription factors, during mouse pre- and postimplantation development. Gene Expression Patterns : Gep. 3: 579-89. PMID 12971990 DOI: 10.1016/S1567-133X(03)00118-2  0.373
2003 Wen YD, Cress WD, Roy AL, Seto E. Histone deacetylase 3 binds to and regulates the multifunctional transcription factor TFII-I. The Journal of Biological Chemistry. 278: 1841-7. PMID 12393887 DOI: 10.1074/Jbc.M206528200  0.405
2002 Ji HB, Gupta A, Okamoto S, Blum MD, Tan L, Goldring MB, Lacy E, Roy AL, Terhorst C. T cell-specific expression of the murine CD3delta promoter. The Journal of Biological Chemistry. 277: 47898-906. PMID 12324448 DOI: 10.1074/jbc.M201025200  0.393
2002 Tussié-Luna MI, Bayarsaihan D, Seto E, Ruddle FH, Roy AL. Physical and functional interactions of histone deacetylase 3 with TFII-I family proteins and PIASxbeta. Proceedings of the National Academy of Sciences of the United States of America. 99: 12807-12. PMID 12239342 DOI: 10.1073/Pnas.192464499  0.434
2002 Tussié-Luna MI, Michel B, Hakre S, Roy AL. The SUMO ubiquitin-protein isopeptide ligase family member Miz1/PIASxβ/Siz2 is a transcriptional cofactor for TFII-I Journal of Biological Chemistry. 277: 43185-43193. PMID 12193603 DOI: 10.1074/Jbc.M207635200  0.501
2002 Cheriyath V, Desgranges ZP, Roy AL. c-Src-dependent transcriptional activation of TFII-I Journal of Biological Chemistry. 277: 22798-22805. PMID 11934902 DOI: 10.1074/Jbc.M202956200  0.482
2001 Roy AL. Biochemistry and biology of the inducible multifunctional transcription factor TFII-I. Gene. 274: 1-13. PMID 11674993 DOI: 10.1016/S0378-1119(01)00625-4  0.568
2001 Tussié-Luna MI, Bayarsaihan D, Ruddle FH, Roy AL. Repression of TFII-I-dependent transcription by nuclear exclusion. Proceedings of the National Academy of Sciences of the United States of America. 98: 7789-94. PMID 11438732 DOI: 10.1073/Pnas.141222298  0.542
2001 Parker R, Phan T, Baumeister P, Roy B, Cheriyath V, Roy AL, Lee AS. Identification of TFII-I as the endoplasmic reticulum stress response element binding factor ERSF: Its autoregulation by stress and interaction with ATF6 Molecular and Cellular Biology. 21: 3220-3233. PMID 11287625 DOI: 10.1128/Mcb.21.9.3220-3233.2001  0.435
2001 Cheriyath V, Roy AL. Structure-function analysis of TFII-I. Roles of the N-terminal end, basic region, and I-repeats Journal of Biological Chemistry. 276: 8377-8383. PMID 11113127 DOI: 10.1074/Jbc.M008411200  0.429
2000 Morikawa N, Clarke TR, Novina CD, Watanabe K, Haqq C, Weiss M, Roy AL, Donahoe PK. Human mullerian-inhibiting substance promoter contains a functional TFII-I-binding initiator Biology of Reproduction. 63: 1075-1083. PMID 10993829 DOI: 10.1095/Biolreprod63.4.1075  0.499
2000 Cheriyath V, Roy AL. Alternatively spliced isoforms of TFII-I: Complex formation, nuclear translocation, and differential gene regulation Journal of Biological Chemistry. 275: 26300-26308. PMID 10854432 DOI: 10.1074/Jbc.M002980200  0.494
1999 Novina CD, Kumar S, Bajpai U, Cheriyath V, Zhang K, Pillai S, Wortis HH, Roy AL. Regulation of nuclear localization and transcriptional activity of TFII- I by Bruton's tyrosine kinase Molecular and Cellular Biology. 19: 5014-5024. PMID 10373551 DOI: 10.1128/Mcb.19.7.5014  0.439
1998 Novina CD, Cheriyath V, Roy AL. Regulation of TFII-I activity by phosphorylation Journal of Biological Chemistry. 273: 33443-33448. PMID 9837922 DOI: 10.1074/Jbc.273.50.33443  0.51
1998 Cheriyath V, Novina CD, Roy AL. TFII-I regulates Vβ promoter activity through an initiator element Molecular and Cellular Biology. 18: 4444-4454. PMID 9671454 DOI: 10.1128/Mcb.18.8.4444  0.492
1998 Kim DW, Cheriyath V, Roy AL, Cochran BH. TFII-I enhances activation of the c-fos promoter through interactions with upstream elements. Molecular and Cellular Biology. 18: 3310-20. PMID 9584171 DOI: 10.1128/Mcb.18.6.3310  0.444
1997 Roy AL, Du H, Gregor PD, Novina CD, Martinez E, Roeder RG. Cloning of an inr- and E-box-binding protein, TFII-I, that interacts physically and functionally with USF1 Embo Journal. 16: 7091-7104. PMID 9384587 DOI: 10.1093/Emboj/16.23.7091  0.455
1997 Grueneberg DA, Henry RW, Brauer A, Novina CD, Cheriyath V, Roy AL, Gilman M. A multifunctional DNA-binding protein that promotes the formation of serum response factor/homeodomain complexes: identity to TFII-I. Genes & Development. 11: 2482-93. PMID 9334314 DOI: 10.1101/Gad.11.19.2482  0.47
1997 Novina CD, Cheriyath V, Denis MC, Roy AL. Methods for studying the biochemical properties of an Inr element binding protein: TFII-I Methods: a Companion to Methods in Enzymology. 12: 254-263. PMID 9237169 DOI: 10.1006/Meth.1997.0477  0.53
1996 Montano MA, Kripke K, Norina CD, Achacoso P, Herzenberg LA, Roy AL, Nolan GP. NF-κB homodimer binding within the HIV-1 initiator region and interactions with TFII-I Proceedings of the National Academy of Sciences of the United States of America. 93: 12376-12381. PMID 8901589 DOI: 10.1073/Pnas.93.22.12376  0.314
1996 Manzano-Winkler B, Novina CD, Roy AL. TFII is required for transcription of the naturally TATA-less but initiator-containing Vβ promoter Journal of Biological Chemistry. 271: 12076-12081. PMID 8662630 DOI: 10.1074/Jbc.271.20.12076  0.51
1996 Novina CD, Roy AL. Core promoters and transcriptional control Trends in Genetics. 12: 351-355. DOI: 10.1016/S0168-9525(96)80017-5  0.551
1993 Fondell JD, Roy AL, Roeder RG. Unliganded thyroid hormone receptor inhibits formation of a functional preinitiation complex: Implications for active repression Genes and Development. 7: 1400-1410. PMID 8392477 DOI: 10.1101/Gad.7.7B.1400  0.511
1993 Roy AL, Carruthers C, Gutjahr T, Roeder RG. Direct role for Myc in transcription initiation mediated by interactions with TFII-I Nature. 365: 359-361. PMID 8377829 DOI: 10.1038/365359a0  0.404
1993 Roy AL, Malik S, Meisterernst M, Roeder RG. An alternative pathway for transcription initiation involving TFII-I Nature. 365: 355-359. PMID 8377828 DOI: 10.1038/365355a0  0.439
1991 Roy AL, Meisterernst M, Pognonec P, Roeder RG. Cooperative interaction of an initiator-binding transcription initiation factor and the helix-loop-helix activator USF Nature. 354: 245-248. PMID 1961251 DOI: 10.1038/354245a0  0.426
1991 Meisterernst M, Roy AL, Lieu HM, Roeder RG. Activation of class II gene transcription by regulatory factors is potentiated by a novel activity Cell. 66: 981-993. PMID 1889091 DOI: 10.1016/0092-8674(91)90443-3  0.354
1990 Hoffman A, Sinn E, Yamamoto T, Wang J, Roy A, Horikoshi M, Roeder RG. Highly conserved core domain and unique N terminus with presumptive regulatory motifs in a human TATA factor (TFIID). Nature. 346: 387-90. PMID 2374612 DOI: 10.1038/346387A0  0.324
1983 Roy A, Danchin A. The cya locus of Escherichia coli K12: organization and gene products. Molecular & General Genetics : Mgg. 188: 465-71. PMID 6298576 DOI: 10.1007/BF00330050  0.323
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