Fabio Piano - Publications

Affiliations: 
Biology New York University, New York, NY, United States 
Area:
Genetics, Cell Biology, Bioinformatics Biology

42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Dalfo D, Ding Y, Liang Q, Fong A, Cipriani PG, Piano F, Zheng JC, Qin Z, Hubbard EJA. A Genome-Wide RNAi Screen for Enhancers of a Germline Tumor Phenotype Caused by Elevated GLP-1/Notch Signaling in . G3 (Bethesda, Md.). PMID 33077477 DOI: 10.1534/g3.120.401632  0.48
2018 West SM, Mecenas D, Gutwein M, Aristizábal-Corrales D, Piano F, Gunsalus KC. Developmental dynamics of gene expression and alternative polyadenylation in the Caenorhabditis elegans germline. Genome Biology. 19: 8. PMID 29368663 DOI: 10.1186/s13059-017-1369-x  0.4
2017 Fradin H, Kiontke K, Zegar C, Gutwein M, Lucas J, Kovtun M, Corcoran DL, Baugh LR, Fitch DHA, Piano F, Gunsalus KC. Genome Architecture and Evolution of a Unichromosomal Asexual Nematode. Current Biology : Cb. PMID 28943090 DOI: 10.1016/j.cub.2017.08.038  0.4
2016 Weicksel SE, Mahadav A, Moyle M, Cipriani PG, Kudron M, Pincus Z, Bahmanyar S, Abriola L, Merkel J, Gutwein M, Fernandez AG, Piano F, Gunsalus KC, Reinke V. A novel small molecule that disrupts a key event during the oocyte-to-embryo transition in C. elegans. Development (Cambridge, England). PMID 27510972 DOI: 10.1242/dev.140046  0.48
2016 Chen JX, Cipriani PG, Mecenas D, Polanowska J, Piano F, Gunsalus KC, Selbach M. In vivo interaction proteomics in C. elegans embryos provides new insights into P granule dynamics. Molecular & Cellular Proteomics : McP. PMID 26912668 DOI: 10.1074/mcp.M115.053975  0.48
2015 Paaby AB, White AG, Riccardi DD, Gunsalus KC, Piano F, Rockman MV. Wild worm embryogenesis harbors ubiquitous polygenic modifier variation. Elife. 4. PMID 26297805 DOI: 10.7554/eLife.09178  0.48
2014 Chen ZX, Sturgill D, Qu J, Jiang H, Park S, Boley N, Suzuki AM, Fletcher AR, Plachetzki DC, FitzGerald PC, Artieri CG, Atallah J, Barmina O, Brown JB, Blankenburg KP, ... ... Piano F, et al. Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome Research. 24: 1209-23. PMID 24985915 DOI: 10.1101/gr.159384.113  0.4
2014 Stoeckius M, Grün D, Kirchner M, Ayoub S, Torti F, Piano F, Herzog M, Selbach M, Rajewsky N. Global characterization of the oocyte-to-embryo transition in Caenorhabditis elegans uncovers a novel mRNA clearance mechanism. The Embo Journal. 33: 1751-66. PMID 24957527 DOI: 10.15252/embj.201488769  0.48
2013 Ray D, Kazan H, Cook KB, Weirauch MT, Najafabadi HS, Li X, Gueroussov S, Albu M, Zheng H, Yang A, Na H, Irimia M, Matzat LH, Dale RK, Smith SA, ... ... Piano F, et al. A compendium of RNA-binding motifs for decoding gene regulation. Nature. 499: 172-7. PMID 23846655 DOI: 10.1038/nature12311  0.48
2013 White AG, Lees B, Kao HL, Cipriani PG, Munarriz E, Paaby AB, Erickson K, Guzman S, Rattanakorn K, Sontag E, Geiger D, Gunsalus KC, Piano F. DevStaR: high-throughput quantification of C. elegans developmental stages. Ieee Transactions On Medical Imaging. 32: 1791-803. PMID 23722463 DOI: 10.1109/TMI.2013.2265092  0.48
2012 Fernandez AG, Bargmann BO, Mis EK, Edgley ML, Birnbaum KD, Piano F. High-throughput fluorescence-based isolation of live C. elegans larvae. Nature Protocols. 7: 1502-10. PMID 22814389 DOI: 10.1038/nprot.2012.084  0.48
2011 Cipriani PG, Piano F. RNAi methods and screening: RNAi based high-throughput genetic interaction screening. Methods in Cell Biology. 106: 89-111. PMID 22118275 DOI: 10.1016/B978-0-12-544172-8.00004-9  0.48
2011 Green RA, Kao HL, Audhya A, Arur S, Mayers JR, Fridolfsson HN, Schulman M, Schloissnig S, Niessen S, Laband K, Wang S, Starr DA, Hyman AA, Schedl T, Desai A, ... Piano F, et al. A high-resolution C. elegans essential gene network based on phenotypic profiling of a complex tissue. Cell. 145: 470-82. PMID 21529718 DOI: 10.1016/j.cell.2011.03.037  0.48
2010 White AG, Cipriani PG, Kao HL, Lees B, Geiger D, Sontag E, Gunsalus KC, Piano F. Rapid and accurate developmental stage recognition of C. elegans from high-throughput image data. Proceedings / Cvpr, Ieee Computer Society Conference On Computer Vision and Pattern Recognition. Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 2010: 3089-3096. PMID 22053146 DOI: 10.1109/CVPR.2010.5540065  0.48
2010 Mangone M, Manoharan AP, Thierry-Mieg D, Thierry-Mieg J, Han T, Mackowiak SD, Mis E, Zegar C, Gutwein MR, Khivansara V, Attie O, Chen K, Salehi-Ashtiani K, Vidal M, Harkins TT, ... ... Piano F, et al. The landscape of C. elegans 3′UTRs Science. 329: 432-435. PMID 20522740 DOI: 10.1126/science.1191244  0.48
2010 Fernandez AG, Mis EK, Bargmann BO, Birnbaum KD, Piano F. Automated sorting of live C. elegans using laFACS. Nature Methods. 7: 417-8. PMID 20436474 DOI: 10.1038/nmeth.f.304  0.48
2009 Parry JM, Velarde NV, Lefkovith AJ, Zegarek MH, Hang JS, Ohm J, Klancer R, Maruyama R, Druzhinina MK, Grant BD, Piano F, Singson A. EGG-4 and EGG-5 Link Events of the Oocyte-to-Embryo Transition with Meiotic Progression in C. elegans. Current Biology : Cb. 19: 1752-7. PMID 19879147 DOI: 10.1016/j.cub.2009.09.015  0.48
2009 Brauchle M, Kiontke K, MacMenamin P, Fitch DH, Piano F. Evolution of early embryogenesis in rhabditid nematodes. Developmental Biology. 335: 253-62. PMID 19643102 DOI: 10.1016/j.ydbio.2009.07.033  0.4
2009 Celniker SE, Dillon LA, Gerstein MB, Gunsalus KC, Henikoff S, Karpen GH, Kellis M, Lai EC, Lieb JD, MacAlpine DM, Micklem G, Piano F, Snyder M, Stein L, White KP, et al. Unlocking the secrets of the genome. Nature. 459: 927-30. PMID 19536255 DOI: 10.1038/459927a  0.48
2008 Boxem M, Maliga Z, Klitgord N, Li N, Lemmens I, Mana M, de Lichtervelde L, Mul JD, van de Peut D, Devos M, Simonis N, Yildirim MA, Cokol M, Kao HL, de Smet AS, ... ... Piano F, et al. A protein domain-based interactome network for C. elegans early embryogenesis. Cell. 134: 534-45. PMID 18692475 DOI: 10.1016/j.cell.2012.11.042  0.48
2008 Mangone M, Macmenamin P, Zegar C, Piano F, Gunsalus KC. UTRome.org: a platform for 3'UTR biology in C. elegans. Nucleic Acids Research. 36: D57-62. PMID 17986455 DOI: 10.1093/nar/gkm946  0.4
2007 Velarde N, Gunsalus KC, Piano F. Diverse roles of actin in C. elegans early embryogenesis. Bmc Developmental Biology. 7: 142. PMID 18157918 DOI: 10.1186/1471-213X-7-142  0.4
2007 Maruyama R, Velarde NV, Klancer R, Gordon S, Kadandale P, Parry JM, Hang JS, Rubin J, Stewart-Michaelis A, Schweinsberg P, Grant BD, Piano F, Sugimoto A, Singson A. EGG-3 regulates cell-surface and cortex rearrangements during egg activation in Caenorhabditis elegans. Current Biology : Cb. 17: 1555-60. PMID 17869112 DOI: 10.1016/j.cub.2007.08.011  0.48
2007 Min J, Kyung Kim Y, Cipriani PG, Kang M, Khersonsky SM, Walsh DP, Lee JY, Niessen S, Yates JR, Gunsalus K, Piano F, Chang YT. Forward chemical genetic approach identifies new role for GAPDH in insulin signaling. Nature Chemical Biology. 3: 55-9. PMID 17115034 DOI: 10.1038/nchembio833  0.48
2006 Piano F, Gunsalus KC, Hill DE, Vidal M. C. elegans network biology: a beginning. Wormbook : the Online Review of C. Elegans Biology. 1-20. PMID 18050437 DOI: 10.1895/wormbook.1.118.1  0.4
2006 Utku Y, Dehan E, Ouerfelli O, Piano F, Zuckermann RN, Pagano M, Kirshenbaum K. A peptidomimetic siRNA transfection reagent for highly effective gene silencing. Molecular Biosystems. 2: 312-7. PMID 16880950 DOI: 10.1039/b603229j  0.48
2006 Lall S, Grün D, Krek A, Chen K, Wang YL, Dewey CN, Sood P, Colombo T, Bray N, Macmenamin P, Kao HL, Gunsalus KC, Pachter L, Piano F, Rajewsky N. A genome-wide map of conserved microRNA targets in C. elegans. Current Biology : Cb. 16: 460-71. PMID 16458514 DOI: 10.1016/j.cub.2006.01.050  0.48
2005 Ning F, Delhomme D, LeCun Y, Piano F, Bottou L, Barbano PE. Toward automatic phenotyping of developing embryos from videos. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. 14: 1360-71. PMID 16190471 DOI: 10.1109/TIP.2005.852470  0.48
2005 Gunsalus KC, Ge H, Schetter AJ, Goldberg DS, Han JD, Hao T, Berriz GF, Bertin N, Huang J, Chuang LS, Li N, Mani R, Hyman AA, Sönnichsen B, Echeverri CJ, ... ... Piano F, et al. Predictive models of molecular machines involved in Caenorhabditis elegans early embryogenesis. Nature. 436: 861-5. PMID 16094371 DOI: 10.1038/nature03876  0.48
2005 Sönnichsen B, Koski LB, Walsh A, Marschall P, Neumann B, Brehm M, Alleaume AM, Artelt J, Bettencourt P, Cassin E, Hewitson M, Holz C, Khan M, Lazik S, Martin C, ... ... Piano F, et al. Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans. Nature. 434: 462-9. PMID 15791247 DOI: 10.1038/nature03353  0.4
2005 Fernandez AG, Gunsalus KC, Huang J, Chuang LS, Ying N, Liang HL, Tang C, Schetter AJ, Zegar C, Rual JF, Hill DE, Reinke V, Vidal M, Piano F. New genes with roles in the C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones. Genome Research. 15: 250-9. PMID 15687288 DOI: 10.1101/gr.3194805  0.4
2005 Gunsalus KC, Piano F. RNAi as a tool to study cell biology: building the genome-phenome bridge. Current Opinion in Cell Biology. 17: 3-8. PMID 15661512 DOI: 10.1016/j.ceb.2004.12.008  0.4
2004 Kiontke K, Gavin NP, Raynes Y, Roehrig C, Piano F, Fitch DH. Caenorhabditis phylogeny predicts convergence of hermaphroditism and extensive intron loss. Proceedings of the National Academy of Sciences of the United States of America. 101: 9003-8. PMID 15184656 DOI: 10.1073/pnas.0403094101  0.4
2004 Li S, Armstrong CM, Bertin N, Ge H, Milstein S, Boxem M, Vidalain PO, Han JD, Chesneau A, Hao T, Goldberg DS, Li N, Martinez M, Rual JF, Lamesch P, ... ... Piano F, et al. A map of the interactome network of the metazoan C. elegans. Science (New York, N.Y.). 303: 540-3. PMID 14704431 DOI: 10.1126/science.1091403  0.48
2004 Gunsalus KC, Yueh WC, MacMenamin P, Piano F. RNAiDB and PhenoBlast: web tools for genome-wide phenotypic mapping projects. Nucleic Acids Research. 32: D406-10. PMID 14681444 DOI: 10.1093/nar/gkh110  0.4
2003 Srinivasan P, Piano F, Shatkin AJ. mRNA capping enzyme requirement for Caenorhabditis elegans viability. The Journal of Biological Chemistry. 278: 14168-73. PMID 12576475 DOI: 10.1074/jbc.M212102200  0.48
2002 Piano F, Schetter AJ, Morton DG, Gunsalus KC, Reinke V, Kim SK, Kemphues KJ. Gene clustering based on RNAi phenotypes of ovary-enriched genes in C. elegans. Current Biology : Cb. 12: 1959-64. PMID 12445391  0.4
2002 Walhout AJ, Reboul J, Shtanko O, Bertin N, Vaglio P, Ge H, Lee H, Doucette-Stamm L, Gunsalus KC, Schetter AJ, Morton DG, Kemphues KJ, Reinke V, Kim SK, Piano F, et al. Integrating interactome, phenome, and transcriptome mapping data for the C. elegans germline. Current Biology : Cb. 12: 1952-8. PMID 12445390  0.4
2000 Tomancak P, Piano F, Riechmann V, Gunsalus KC, Kemphues KJ, Ephrussi A. A Drosophila melanogaster homologue of Caenorhabditis elegans par-1 acts at an early step in embryonic-axis formation. Nature Cell Biology. 2: 458-60. PMID 10878812 DOI: 10.1038/35017101  0.48
1997 Piano F, Craddock EM, Kambysellis MP. Phylogeny of the island populations of the Hawaiian Drosophila grimshawi complex: evidence from combined data. Molecular Phylogenetics and Evolution. 7: 173-84. PMID 9126558 DOI: 10.1006/mpev.1996.0387  0.48
1996 Ho KF, Craddock EM, Piano F, Kambysellis MP. Phylogenetic analysis of DNA length mutations in a repetitive region of the Hawaiian Drosophila yolk protein gene Yp2. Journal of Molecular Evolution. 43: 116-24. PMID 8660436 DOI: 10.1007/BF02337356  0.48
1995 Kambysellis MP, Ho KF, Craddock EM, Piano F, Parisi M, Cohen J. Pattern of ecological shifts in the diversification of Hawaiian Drosophila inferred from a molecular phylogeny. Current Biology : Cb. 5: 1129-39. PMID 8548285 DOI: 10.1016/S0960-9822(95)00229-6  0.48
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