David M. Stelly - Publications

Affiliations: 
Texas A & M University, College Station, TX, United States 
Area:
Genetics, Molecular Biology

40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Saski CA, Scheffler BE, Hulse-Kemp AM, Liu B, Song Q, Ando A, Stelly DM, Scheffler JA, Grimwood J, Jones DC, Peterson DG, Schmutz J, Chen ZJ. Sub genome anchored physical frameworks of the allotetraploid Upland cotton (Gossypium hirsutum L.) genome, and an approach toward reference-grade assemblies of polyploids. Scientific Reports. 7: 15274. PMID 29127298 DOI: 10.1038/s41598-017-14885-w  0.4
2017 Song Q, Zhang T, Stelly DM, Chen ZJ. Epigenomic and functional analyses reveal roles of epialleles in the loss of photoperiod sensitivity during domestication of allotetraploid cottons. Genome Biology. 18: 99. PMID 28558752 DOI: 10.1186/s13059-017-1229-8  0.4
2015 Zheng X, Hoegenauer KA, Maeda AB, Wang F, Stelly DM, Nichols RL, Jones DC. Non-destructive high-throughput DNA extraction and genotyping methods for cotton seeds and seedlings. Biotechniques. 58: 234-43. PMID 25967902 DOI: 10.2144/000114286  0.6
2015 Kim HJ, Hinchliffe DJ, Triplett BA, Chen ZJ, Stelly DM, Yeater KM, Moon HS, Gilbert MK, Thyssen GN, Turley RB, Fang DD. Phytohormonal networks promote differentiation of fiber initials on pre-anthesis cotton ovules grown in vitro and in planta. Plos One. 10: e0125046. PMID 25927364 DOI: 10.1371/journal.pone.0125046  0.6
2015 Hulse-Kemp AM, Lemm J, Plieske J, Ashrafi H, Buyyarapu R, Fang DD, Frelichowski J, Giband M, Hague S, Hinze LL, Kochan KJ, Riggs PK, Scheffler JA, Udall JA, Ulloa M, ... ... Stelly DM, et al. Development of a 63K SNP Array for Cotton and High-Density Mapping of Intraspecific and Interspecific Populations of Gossypium spp. G3 (Bethesda, Md.). 5: 1187-209. PMID 25908569 DOI: 10.1534/g3.115.018416  0.6
2015 Zhang T, Hu Y, Jiang W, Fang L, Guan X, Chen J, Zhang J, Saski CA, Scheffler BE, Stelly DM, Hulse-Kemp AM, Wan Q, Liu B, Liu C, Wang S, et al. Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement. Nature Biotechnology. 33: 531-7. PMID 25893781 DOI: 10.1038/nbt.3207  0.6
2015 Zhang M, Rong Y, Lee MK, Zhang Y, Stelly DM, Zhang HB. Phylogenetic analysis of Gossypium L. using restriction fragment length polymorphism of repeated sequences. Molecular Genetics and Genomics : Mgg. PMID 25877517 DOI: 10.1007/s00438-015-1039-1  0.6
2015 Hulse-Kemp AM, Ashrafi H, Stoffel K, Zheng X, Saski CA, Scheffler BE, Fang DD, Chen ZJ, Van Deynze A, Stelly DM. BAC-End Sequence-Based SNP Mining in Allotetraploid Cotton (Gossypium) Utilizing Resequencing Data, Phylogenetic Inferences, and Perspectives for Genetic Mapping. G3 (Bethesda, Md.). 5: 1095-105. PMID 25858960 DOI: 10.1534/g3.115.017749  0.4
2014 Hulse-Kemp AM, Ashrafi H, Zheng X, Wang F, Hoegenauer KA, Maeda AB, Yang SS, Stoffel K, Matvienko M, Clemons K, Udall JA, Van Deynze A, Jones DC, Stelly DM. Development and bin mapping of gene-associated interspecific SNPs for cotton (Gossypium hirsutum L.) introgression breeding efforts. Bmc Genomics. 15: 945. PMID 25359292 DOI: 10.1186/1471-2164-15-945  0.6
2014 Guan X, Nah G, Song Q, Udall JA, Stelly DM, Chen ZJ. Transcriptome analysis of extant cotton progenitors revealed tetraploidization and identified genome-specific single nucleotide polymorphism in diploid and allotetraploid cotton. Bmc Research Notes. 7: 493. PMID 25099166 DOI: 10.1186/1756-0500-7-493  0.4
2014 Guan X, Pang M, Nah G, Shi X, Ye W, Stelly DM, Chen ZJ. miR828 and miR858 regulate homoeologous MYB2 gene functions in Arabidopsis trichome and cotton fibre development. Nature Communications. 5: 3050. PMID 24430011 DOI: 10.1038/ncomms4050  0.4
2013 Lee MK, Zhang Y, Zhang M, Goebel M, Kim HJ, Triplett BA, Stelly DM, Zhang HB. Construction of a plant-transformation-competent BIBAC library and genome sequence analysis of polyploid Upland cotton (Gossypium hirsutum L.). Bmc Genomics. 14: 208. PMID 23537070 DOI: 10.1186/1471-2164-14-208  0.6
2012 Gao W, Saha S, Ma DP, Guo Y, Jenkins JN, Stelly DM. A cotton-fiber-associated cyclin-dependent kinase a gene: characterization and chromosomal location. International Journal of Plant Genomics. 2012: 613812. PMID 22745634 DOI: 10.1155/2012/613812  0.6
2012 Yu JZ, Kohel RJ, Fang DD, Cho J, Van Deynze A, Ulloa M, Hoffman SM, Pepper AE, Stelly DM, Jenkins JN, Saha S, Kumpatla SP, Shah MR, Hugie WV, Percy RG. A high-density simple sequence repeat and single nucleotide polymorphism genetic map of the tetraploid cotton genome. G3 (Bethesda, Md.). 2: 43-58. PMID 22384381 DOI: 10.1534/g3.111.001552  0.6
2011 Buriev ZT, Saha S, Shermatov SE, Jenkins JN, Abdukarimov A, Stelly DM, Abdurakhmonov IY. Molecular evolution of the clustered MIC-3 multigene family of Gossypium species. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 123: 1359-73. PMID 21850479 DOI: 10.1007/s00122-011-1672-y  0.6
2011 Guan X, Lee JJ, Pang M, Shi X, Stelly DM, Chen ZJ. Activation of Arabidopsis seed hair development by cotton fiber-related genes. Plos One. 6: e21301. PMID 21779324 DOI: 10.1371/journal.pone.0021301  0.4
2010 Kuhlman LC, Burson BL, Stelly DM, Klein PE, Klein RR, Price HJ, Rooney WL. Early-generation germplasm introgression from Sorghum macrospermum into sorghum (S. bicolor). Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 53: 419-29. PMID 20555431 DOI: 10.1139/g10-027  0.6
2010 Wang K, Guo W, Yang Z, Hu Y, Zhang W, Zhou B, Stelly DM, Chen ZJ, Zhang T. Structure and size variations between 12A and 12D homoeologous chromosomes based on high-resolution cytogenetic map in allotetraploid cotton. Chromosoma. 119: 255-66. PMID 20127105 DOI: 10.1007/s00412-009-0254-0  0.4
2010 Saha S, Wu J, Jenkins JN, McCarty JC, Hayes R, Stelly DM. Genetic dissection of chromosome substitution lines of cotton to discover novel Gossypium barbadense L. alleles for improvement of agronomic traits. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 120: 1193-205. PMID 20094702 DOI: 10.1007/s00122-009-1247-3  0.6
2010 Buriev ZT, Saha S, Abdurakhmonov IY, Jenkins JN, Abdukarimov A, Scheffler BE, Stelly DM. Clustering, haplotype diversity and locations of MIC-3: a unique root-specific defense-related gene family in Upland cotton (Gossypium hirsutum L.). Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 120: 587-606. PMID 19862497 DOI: 10.1007/s00122-009-1178-z  0.6
2009 Pang M, Woodward AW, Agarwal V, Guan X, Ha M, Ramachandran V, Chen X, Triplett BA, Stelly DM, Chen ZJ. Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.). Genome Biology. 10: R122. PMID 19889219 DOI: 10.1186/gb-2009-10-11-r122  0.6
2009 Van Deynze A, Stoffel K, Lee M, Wilkins TA, Kozik A, Cantrell RG, Yu JZ, Kohel RJ, Stelly DM. Sampling nucleotide diversity in cotton. Bmc Plant Biology. 9: 125. PMID 19840401 DOI: 10.1186/1471-2229-9-125  0.6
2008 Kuhlman LC, Burson BL, Klein PE, Klein RR, Stelly DM, Price HJ, Rooney WL. Genetic recombination in Sorghum bicolor x S. macrospermum interspecific hybrids. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 51: 749-56. PMID 18772953 DOI: 10.1139/G08-061  0.6
2008 An C, Saha S, Jenkins JN, Ma DP, Scheffler BE, Kohel RJ, Yu JZ, Stelly DM. Cotton (Gossypium spp.) R2R3-MYB transcription factors SNP identification, phylogenomic characterization, chromosome localization, and linkage mapping. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 116: 1015-26. PMID 18338155 DOI: 10.1007/s00122-008-0732-4  0.6
2007 Chen ZJ, Scheffler BE, Dennis E, Triplett BA, Zhang T, Guo W, Chen X, Stelly DM, Rabinowicz PD, Town CD, Arioli T, Brubaker C, Cantrell RG, Lacape JM, Ulloa M, et al. Toward sequencing cotton (Gossypium) genomes. Plant Physiology. 145: 1303-10. PMID 18056866 DOI: 10.1104/pp.107.107672  0.6
2007 An C, Saha S, Jenkins JN, Scheffler BE, Wilkins TA, Stelly DM. Transcriptome profiling, sequence characterization, and SNP-based chromosomal assignment of the EXPANSIN genes in cotton. Molecular Genetics and Genomics : Mgg. 278: 539-53. PMID 17724613 DOI: 10.1007/s00438-007-0270-9  0.6
2006 Samuel Yang S, Cheung F, Lee JJ, Ha M, Wei NE, Sze SH, Stelly DM, Thaxton P, Triplett B, Town CD, Jeffrey Chen Z. Accumulation of genome-specific transcripts, transcription factors and phytohormonal regulators during early stages of fiber cell development in allotetraploid cotton. The Plant Journal : For Cell and Molecular Biology. 47: 761-75. PMID 16889650 DOI: 10.1111/j.1365-313X.2006.02829.x  0.6
2006 Frelichowski JE, Palmer MB, Main D, Tomkins JP, Cantrell RG, Stelly DM, Yu J, Kohel RJ, Ulloa M. Cotton genome mapping with new microsatellites from Acala 'Maxxa' BAC-ends. Molecular Genetics and Genomics : Mgg. 275: 479-91. PMID 16501995 DOI: 10.1007/s00438-006-0106-z  0.6
2006 Saha S, Jenkins JN, Wu J, McCarty JC, Gutiérrez OA, Percy RG, Cantrell RG, Stelly DM. Effects of chromosome-specific introgression in upland cotton on fiber and agronomic traits. Genetics. 172: 1927-38. PMID 16387867 DOI: 10.1534/genetics.105.053371  0.6
2006 Gao W, Chen ZJ, Yu JZ, Kohel RJ, Womack JE, Stelly DM. Wide-cross whole-genome radiation hybrid mapping of the cotton (Gossypium barbadense L.) genome. Molecular Genetics and Genomics : Mgg. 275: 105-13. PMID 16362372 DOI: 10.1007/s00438-005-0069-5  0.6
2006 Wu J, Jenkins JN, McCarty JC, Saha S, Stelly DM. An additive-dominance model to determine chromosomal effects in chromosome substitution lines and other gemplasms. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 112: 391-9. PMID 16341682 DOI: 10.1007/s00122-005-0042-z  0.6
2006 Lee JJ, Hassan OS, Gao W, Wei NE, Kohel RJ, Chen XY, Payton P, Sze SH, Stelly DM, Chen ZJ. Developmental and gene expression analyses of a cotton naked seed mutant. Planta. 223: 418-32. PMID 16254724 DOI: 10.1007/s00425-005-0098-7  0.6
2005 Park YH, Alabady MS, Ulloa M, Sickler B, Wilkins TA, Yu J, Stelly DM, Kohel RJ, el-Shihy OM, Cantrell RG. Genetic mapping of new cotton fiber loci using EST-derived microsatellites in an interspecific recombinant inbred line cotton population. Molecular Genetics and Genomics : Mgg. 274: 428-41. PMID 16187061 DOI: 10.1007/s00438-005-0037-0  0.6
2005 Kim JS, Klein PE, Klein RR, Price HJ, Mullet JE, Stelly DM. Molecular cytogenetic maps of sorghum linkage groups 2 and 8. Genetics. 169: 955-65. PMID 15489513 DOI: 10.1534/genetics.104.026765  0.6
2005 Kim JS, Klein PE, Klein RR, Price HJ, Mullet JE, Stelly DM. Chromosome identification and nomenclature of Sorghum bicolor. Genetics. 169: 1169-73. PMID 15489512 DOI: 10.1534/genetics.104.035980  0.6
2004 Gao W, Chen ZJ, Yu JZ, Raska D, Kohel RJ, Womack JE, Stelly DM. Wide-cross whole-genome radiation hybrid mapping of cotton (Gossypium hirsutum L.). Genetics. 167: 1317-29. PMID 15280245 DOI: 10.1534/genetics.103.020479  0.6
2004 Mei M, Syed NH, Gao W, Thaxton PM, Smith CW, Stelly DM, Chen ZJ. Genetic mapping and QTL analysis of fiber-related traits in cotton ( Gossypium). Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 108: 280-91. PMID 14513220 DOI: 10.1007/s00122-003-1433-7  0.6
2002 Kim JS, Childs KL, Islam-Faridi MN, Menz MA, Klein RR, Klein PE, Price HJ, Mullet JE, Stelly DM. Integrated karyotyping of sorghum by in situ hybridization of landed BACs. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 45: 402-12. PMID 11962637 DOI: 10.1139/g01-141  0.6
2000 Zwick MS, Islam-Faridi MN, Zhang HB, Hodnett GL, Gomez MI, Kim JS, Price HJ, Stelly DM. Distribution and sequence analysis of the centromere-associated repetitive element CEN38 of Sorghum bicolor (Poaceae). American Journal of Botany. 87: 1757-64. PMID 11118410  0.48
1997 Hodnett GL, Crane CF, Stelly DM. A rapid stain-clearing method for video based cytological analysis of cotton megagametophytes. Biotechnic & Histochemistry : Official Publication of the Biological Stain Commission. 72: 16-21. PMID 9062705  0.48
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