Tatjana Sauka-Spengler - Publications

Affiliations: 
Biology California Institute of Technology, Pasadena, CA 
Area:
Human Development, Cell Biology

50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Hockman D, Chong-Morrison V, Green SA, Gavriouchkina D, Candido-Ferreira I, Ling ITC, Williams RM, Amemiya CT, Smith JJ, Bronner ME, Sauka-Spengler T. A genome-wide assessment of the ancestral neural crest gene regulatory network. Nature Communications. 10: 4689. PMID 31619682 DOI: 10.1038/s41467-019-12687-4  0.64
2018 Smith JJ, Timoshevskaya N, Ye C, Holt C, Keinath MC, Parker HJ, Cook ME, Hess JE, Narum SR, Lamanna F, Kaessmann H, Timoshevskiy VA, Waterbury CKM, Saraceno C, Wiedemann LM, ... ... Sauka-Spengler T, et al. Publisher Correction: The sea lamprey germline genome provides insights into programmed genome rearrangement and vertebrate evolution. Nature Genetics. PMID 30224652 DOI: 10.1038/s41588-018-0199-4  0.44
2018 Smith JJ, Timoshevskaya N, Ye C, Holt C, Keinath MC, Parker HJ, Cook ME, Hess JE, Narum SR, Lamanna F, Kaessmann H, Timoshevskiy VA, Waterbury CKM, Saraceno C, Wiedemann LM, ... ... Sauka-Spengler T, et al. Publisher Correction: The sea lamprey germline genome provides insights into programmed genome rearrangement and vertebrate evolution. Nature Genetics. PMID 29674745 DOI: 10.1038/s41588-018-0075-2  0.44
2018 Smith JJ, Timoshevskaya N, Ye C, Holt C, Keinath MC, Parker HJ, Cook ME, Hess JE, Narum SR, Lamanna F, Kaessmann H, Timoshevskiy VA, Waterbury CKM, Saraceno C, Wiedemann LM, ... ... Sauka-Spengler T, et al. The sea lamprey germline genome provides insights into programmed genome rearrangement and vertebrate evolution. Nature Genetics. PMID 29358652 DOI: 10.1038/s41588-017-0036-1  0.44
2016 Choi HM, Calvert CR, Husain N, Huss D, Barsi JC, Deverman BE, Hunter RC, Kato M, Lee SM, Abelin AC, Rosenthal AZ, Akbari OS, Li Y, Hay BA, Sternberg PW, ... ... Sauka-Spengler T, et al. Mapping a multiplexed zoo of mRNA expression. Development (Cambridge, England). 143: 3632-3637. PMID 27702788 DOI: 10.1242/dev.140137  0.64
2016 Hay D, Hughes JR, Babbs C, Davies JO, Graham BJ, Hanssen LL, Kassouf MT, Oudelaar AM, Sharpe JA, Suciu MC, Telenius J, Williams R, Rode C, Li PS, Pennacchio LA, ... ... Sauka-Spengler T, et al. Genetic dissection of the α-globin super-enhancer in vivo. Nature Genetics. PMID 27376235 DOI: 10.1038/ng.3605  0.64
2016 Bogdanović O, Smits AH, de la Calle Mustienes E, Tena JJ, Ford E, Williams R, Senanayake U, Schultz MD, Hontelez S, van Kruijsbergen I, Rayon T, Gnerlich F, Carell T, Veenstra GJ, Manzanares M, ... Sauka-Spengler T, et al. Active DNA demethylation at enhancers during the vertebrate phylotypic period. Nature Genetics. PMID 26928226 DOI: 10.1038/ng.3522  0.64
2015 Gu W, Monteiro R, Zuo J, Simões FC, Martella A, Andrieu-Soler C, Grosveld F, Sauka-Spengler T, Patient R. A novel TGFβ modulator that uncouples R-Smad/I-Smad-mediated negative feedback from R-Smad/ligand-driven positive feedback. Plos Biology. 13: e1002051. PMID 25665164 DOI: 10.1371/journal.pbio.1002051  0.64
2015 Uy BR, Simoes-Costa M, Koo DE, Sauka-Spengler T, Bronner ME. Evolutionarily conserved role for SoxC genes in neural crest specification and neuronal differentiation. Developmental Biology. 397: 282-92. PMID 25286121 DOI: 10.1016/j.ydbio.2014.09.022  0.64
2014 Bassett AR, Azzam G, Wheatley L, Tibbit C, Rajakumar T, McGowan S, Stanger N, Ewels PA, Taylor S, Ponting CP, Liu JL, Sauka-Spengler T, Fulga TA. Understanding functional miRNA-target interactions in vivo by site-specific genome engineering. Nature Communications. 5: 4640. PMID 25135198 DOI: 10.1038/ncomms5640  0.64
2014 Modrell MS, Hockman D, Uy B, Buckley D, Sauka-Spengler T, Bronner ME, Baker CV. A fate-map for cranial sensory ganglia in the sea lamprey. Developmental Biology. 385: 405-16. PMID 24513489 DOI: 10.1016/j.ydbio.2013.10.021  0.64
2014 Betancur P, Simões-Costa M, Sauka-Spengler T, Bronner ME. Expression and function of transcription factor cMyb during cranial neural crest development. Mechanisms of Development. 132: 38-43. PMID 24509349 DOI: 10.1016/j.mod.2014.01.005  0.64
2014 Parker HJ, Sauka-Spengler T, Bronner M, Elgar G. A reporter assay in lamprey embryos reveals both functional conservation and elaboration of vertebrate enhancers. Plos One. 9: e85492. PMID 24416417 DOI: 10.1371/journal.pone.0085492  0.64
2014 Simões-Costa M, Tan-Cabugao J, Antoshechkin I, Sauka-Spengler T, Bronner ME. Transcriptome analysis reveals novel players in the cranial neural crest gene regulatory network. Genome Research. 24: 281-90. PMID 24389048 DOI: 10.1101/gr.161182.113  0.64
2013 Amemiya CT, Alföldi J, Lee AP, Fan S, Philippe H, Maccallum I, Braasch I, Manousaki T, Schneider I, Rohner N, Organ C, Chalopin D, Smith JJ, Robinson M, Dorrington RA, ... ... Sauka-Spengler T, et al. The African coelacanth genome provides insights into tetrapod evolution. Nature. 496: 311-6. PMID 23598338 DOI: 10.1038/nature12027  0.64
2013 Smith JJ, Kuraku S, Holt C, Sauka-Spengler T, Jiang N, Campbell MS, Yandell MD, Manousaki T, Meyer A, Bloom OE, Morgan JR, Buxbaum JD, Sachidanandam R, Sims C, Garruss AS, et al. Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution. Nature Genetics. 45: 415-21, 421e1-2. PMID 23435085 DOI: 10.1038/ng.2568  0.64
2012 Simões-Costa MS, McKeown SJ, Tan-Cabugao J, Sauka-Spengler T, Bronner ME. Dynamic and differential regulation of stem cell factor FoxD3 in the neural crest is Encrypted in the genome. Plos Genetics. 8: e1003142. PMID 23284303 DOI: 10.1371/journal.pgen.1003142  0.64
2012 Hu N, Strobl-Mazzulla P, Sauka-Spengler T, Bronner ME. DNA methyltransferase3A as a molecular switch mediating the neural tube-to-neural crest fate transition. Genes & Development. 26: 2380-5. PMID 23124063 DOI: 10.1101/gad.198747.112  0.64
2012 Uy BR, Simoes-Costa M, Sauka-Spengler T, Bronner ME. Expression of Sox family genes in early lamprey development. The International Journal of Developmental Biology. 56: 377-83. PMID 22811271 DOI: 10.1387/ijdb.113416bu  0.64
2012 Prasad MS, Sauka-Spengler T, LaBonne C. Induction of the neural crest state: control of stem cell attributes by gene regulatory, post-transcriptional and epigenetic interactions. Developmental Biology. 366: 10-21. PMID 22583479 DOI: 10.1016/j.ydbio.2012.03.014  0.64
2011 Parker HJ, Piccinelli P, Sauka-Spengler T, Bronner M, Elgar G. Ancient Pbx-Hox signatures define hundreds of vertebrate developmental enhancers. Bmc Genomics. 12: 637. PMID 22208168 DOI: 10.1186/1471-2164-12-637  0.64
2011 Häming D, Simoes-Costa M, Uy B, Valencia J, Sauka-Spengler T, Bronner-Fraser M. Expression of sympathetic nervous system genes in Lamprey suggests their recruitment for specification of a new vertebrate feature. Plos One. 6: e26543. PMID 22046306 DOI: 10.1371/journal.pone.0026543  0.64
2011 Betancur P, Sauka-Spengler T, Bronner M. A Sox10 enhancer element common to the otic placode and neural crest is activated by tissue-specific paralogs. Development (Cambridge, England). 138: 3689-98. PMID 21775416 DOI: 10.1242/dev.057836  0.64
2010 Sauka-Spengler T, Bronner M. Snapshot: neural crest. Cell. 143: 486-486.e1. PMID 21029868 DOI: 10.1016/j.cell.2010.10.025  0.64
2010 Cerny R, Cattell M, Sauka-Spengler T, Bronner-Fraser M, Yu F, Medeiros DM. Evidence for the prepattern/cooption model of vertebrate jaw evolution. Proceedings of the National Academy of Sciences of the United States of America. 107: 17262-7. PMID 20855630 DOI: 10.1073/pnas.1009304107  0.64
2010 Strobl-Mazzulla PH, Sauka-Spengler T, Bronner-Fraser M. Histone demethylase JmjD2A regulates neural crest specification. Developmental Cell. 19: 460-8. PMID 20833367 DOI: 10.1016/j.devcel.2010.08.009  0.56
2010 Smith JJ, Stuart AB, Sauka-Spengler T, Clifton SW, Amemiya CT. Development and analysis of a germline BAC resource for the sea lamprey, a vertebrate that undergoes substantial chromatin diminution Chromosoma. 119: 381-389. PMID 20195622 DOI: 10.1007/s00412-010-0263-z  0.64
2010 Betancur P, Bronner-Fraser M, Sauka-Spengler T. Genomic code for Sox10 activation reveals a key regulatory enhancer for cranial neural crest. Proceedings of the National Academy of Sciences of the United States of America. 107: 3570-5. PMID 20139305 DOI: 10.1073/pnas.0906596107  0.64
2010 Betancur P, Bronner-Fraser M, Sauka-Spengler T. Assembling neural crest regulatory circuits into a gene regulatory network. Annual Review of Cell and Developmental Biology. 26: 581-603. PMID 19575671 DOI: 10.1146/annurev.cellbio.042308.113245  0.64
2009 Nikitina N, Bronner-Fraser M, Sauka-Spengler T. Immunostaining of whole-mount and sectioned lamprey embryos. Cold Spring Harbor Protocols. 2009: pdb.prot5126. PMID 20147021 DOI: 10.1101/pdb.prot5126  0.56
2009 Nikitina N, Bronner-Fraser M, Sauka-Spengler T. Whole-mount in situ hybridization on lamprey embryos. Cold Spring Harbor Protocols. 2009: pdb.prot5125. PMID 20147020 DOI: 10.1101/pdb.prot5125  0.56
2009 Nikitina N, Bronner-Fraser M, Sauka-Spengler T. DiI cell labeling in lamprey embryos. Cold Spring Harbor Protocols. 2009: pdb.prot5124. PMID 20147019 DOI: 10.1101/pdb.prot5124  0.56
2009 Nikitina N, Bronner-Fraser M, Sauka-Spengler T. Microinjection of RNA and morpholino oligos into lamprey embryos. Cold Spring Harbor Protocols. 2009: pdb.prot5123. PMID 20147018 DOI: 10.1101/pdb.prot5123  0.56
2009 Nikitina N, Bronner-Fraser M, Sauka-Spengler T. Culturing lamprey embryos. Cold Spring Harbor Protocols. 2009: pdb.prot5122. PMID 20147017 DOI: 10.1101/pdb.prot5122  0.56
2009 Nikitina N, Bronner-Fraser M, Sauka-Spengler T. The sea lamprey Petromyzon marinus: a model for evolutionary and developmental biology. Cold Spring Harbor Protocols. 2009: pdb.emo113. PMID 20147008 DOI: 10.1101/pdb.emo113  0.56
2009 Nikitina N, Sauka-Spengler T, Bronner-Fraser M. Chapter 1. Gene regulatory networks in neural crest development and evolution. Current Topics in Developmental Biology. 86: 1-14. PMID 19361687 DOI: 10.1016/S0070-2153(09)01001-1  0.56
2008 Nikitina N, Sauka-Spengler T, Bronner-Fraser M. Dissecting early regulatory relationships in the lamprey neural crest gene network. Proceedings of the National Academy of Sciences of the United States of America. 105: 20083-8. PMID 19104059 DOI: 10.1073/pnas.0806009105  0.56
2008 Sauka-Spengler T, Bronner-Fraser M. Evolution of the neural crest viewed from a gene regulatory perspective. Genesis (New York, N.Y. : 2000). 46: 673-82. PMID 19003930 DOI: 10.1002/dvg.20436  0.56
2008 Coolen M, Nicolle D, Plouhinec JL, Gombault A, Sauka-Spengler T, Menuet A, Pieau C, Mazan S. Molecular characterization of the gastrula in the turtle Emys orbicularis: an evolutionary perspective on gastrulation. Plos One. 3: e2676. PMID 18628985 DOI: 10.1371/journal.pone.0002676  0.6
2008 Sauka-Spengler T, Bronner-Fraser M. Insights from a sea lamprey into the evolution of neural crest gene regulatory network. The Biological Bulletin. 214: 303-14. PMID 18574106  0.56
2008 Putnam NH, Butts T, Ferrier DE, Furlong RF, Hellsten U, Kawashima T, Robinson-Rechavi M, Shoguchi E, Terry A, Yu JK, Benito-Gutiérrez EL, Dubchak I, Garcia-Fernàndez J, Gibson-Brown JJ, Grigoriev IV, ... ... Sauka-Spengler T, et al. The amphioxus genome and the evolution of the chordate karyotype. Nature. 453: 1064-71. PMID 18563158 DOI: 10.1038/nature06967  0.64
2008 Sauka-Spengler T, Bronner-Fraser M. A gene regulatory network orchestrates neural crest formation. Nature Reviews. Molecular Cell Biology. 9: 557-68. PMID 18523435 DOI: 10.1038/nrm2428  0.56
2008 Sauka-Spengler T, Barembaum M. Gain- and loss-of-function approaches in the chick embryo. Methods in Cell Biology. 87: 237-56. PMID 18485300 DOI: 10.1016/S0091-679X(08)00212-4  0.36
2007 Sauka-Spengler T, Meulemans D, Jones M, Bronner-Fraser M. Ancient evolutionary origin of the neural crest gene regulatory network. Developmental Cell. 13: 405-20. PMID 17765683 DOI: 10.1016/j.devcel.2007.08.005  0.56
2007 Coolen M, Sauka-Spengler T, Nicolle D, Le-Mentec C, Lallemand Y, Da Silva C, Plouhinec JL, Robert B, Wincker P, Shi DL, Mazan S. Evolution of axis specification mechanisms in jawed vertebrates: insights from a chondrichthyan. Plos One. 2: e374. PMID 17440610 DOI: 10.1371/journal.pone.0000374  0.6
2006 Sauka-Spengler T, Bronner-Fraser M. Development and evolution of the migratory neural crest: a gene regulatory perspective. Current Opinion in Genetics & Development. 16: 360-6. PMID 16793256 DOI: 10.1016/j.gde.2006.06.006  0.56
2004 Fraser PE, Sauka-Spengler T. Expression of the polycomb group gene bmi-1 in the early chick embryo. Gene Expression Patterns : Gep. 5: 23-7. PMID 15533814 DOI: 10.1016/j.modgep.2004.06.011  0.64
2003 Sauka-Spengler T, Baratte B, Lepage M, Mazan S. Characterization of Brachyury genes in the dogfish S. canicula and the lamprey L. fluviatilis. Insights into gastrulation in a chondrichthyan. Developmental Biology. 263: 296-307. PMID 14597203  0.6
2003 Plouhinec JL, Sauka-Spengler T, Germot A, Le Mentec C, Cabana T, Harrison G, Pieau C, Sire JY, Véron G, Mazan S. The mammalian Crx genes are highly divergent representatives of the Otx5 gene family, a gnathostome orthology class of orthodenticle-related homeogenes involved in the differentiation of retinal photoreceptors and circadian entrainment. Molecular Biology and Evolution. 20: 513-21. PMID 12654938 DOI: 10.1093/molbev/msg085  0.6
2002 Sauka-Spengler T, Le Mentec C, Lepage M, Mazan S. Embryonic expression of Tbx1, a DiGeorge syndrome candidate gene, in the lamprey Lampetra fluviatilis. Gene Expression Patterns : Gep. 2: 99-103. PMID 12617845  0.6
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