Oliver G. McDonald, Ph.D. - Publications

2006 University of Virginia, Charlottesville, VA 
Molecular Biology

10/31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2011 Hansen KD, Timp W, Bravo HC, Sabunciyan S, Langmead B, McDonald OG, Wen B, Wu H, Liu Y, Diep D, Briem E, Zhang K, Irizarry RA, Feinberg AP. Increased methylation variation in epigenetic domains across cancer types. Nature Genetics. 43: 768-75. PMID 21706001 DOI: 10.1038/Ng.865  0.44
2007 Hastings NE, Simmers MB, McDonald OG, Wamhoff BR, Blackman BR. Atherosclerosis-prone hemodynamics differentially regulates endothelial and smooth muscle cell phenotypes and promotes pro-inflammatory priming. American Journal of Physiology. Cell Physiology. 293: C1824-33. PMID 17913848 DOI: 10.1152/ajpcell.00385.2007  0.52
2007 McDonald OG, Owens GK. Programming smooth muscle plasticity with chromatin dynamics. Circulation Research. 100: 1428-41. PMID 17525382 DOI: 10.1161/01.RES.0000266448.30370.a0  0.52
2007 Gan Q, Yoshida T, McDonald OG, Owens GK. Concise review: epigenetic mechanisms contribute to pluripotency and cell lineage determination of embryonic stem cells. Stem Cells (Dayton, Ohio). 25: 2-9. PMID 17023513 DOI: 10.1634/stemcells.2006-0383  0.52
2006 Davis CA, Haberland M, Arnold MA, Sutherland LB, McDonald OG, Richardson JA, Childs G, Harris S, Owens GK, Olson EN. PRISM/PRDM6, a transcriptional repressor that promotes the proliferative gene program in smooth muscle cells. Molecular and Cellular Biology. 26: 2626-36. PMID 16537907 DOI: 10.1128/Mcb.26.7.2626-2636.2006  0.52
2006 McDonald OG, Wamhoff BR, Hoofnagle MH, Owens GK. Control of SRF binding to CArG box chromatin regulates smooth muscle gene expression in vivo. The Journal of Clinical Investigation. 116: 36-48. PMID 16395403 DOI: 10.1172/JCI26505  0.52
2005 Hendrix JA, Wamhoff BR, McDonald OG, Sinha S, Yoshida T, Owens GK. 5' CArG degeneracy in smooth muscle alpha-actin is required for injury-induced gene suppression in vivo. The Journal of Clinical Investigation. 115: 418-27. PMID 15690088 DOI: 10.1172/JCI22648  0.52
2005 Liu Y, Sinha S, McDonald OG, Shang Y, Hoofnagle MH, Owens GK. Kruppel-like factor 4 abrogates myocardin-induced activation of smooth muscle gene expression. The Journal of Biological Chemistry. 280: 9719-27. PMID 15623517 DOI: 10.1074/jbc.M412862200  0.52
2004 Wamhoff BR, Hoofnagle MH, Burns A, Sinha S, McDonald OG, Owens GK. A G/C element mediates repression of the SM22alpha promoter within phenotypically modulated smooth muscle cells in experimental atherosclerosis. Circulation Research. 95: 981-8. PMID 15486317 DOI: 10.1161/01.RES.0000147961.09840.fb  0.52
2004 Wamhoff BR, Bowles DK, McDonald OG, Sinha S, Somlyo AP, Somlyo AV, Owens GK. L-type voltage-gated Ca2+ channels modulate expression of smooth muscle differentiation marker genes via a rho kinase/myocardin/SRF-dependent mechanism. Circulation Research. 95: 406-14. PMID 15256479 DOI: 10.1161/01.Res.0000138582.36921.9E  0.52
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2011 McDonald OG, Rodriguez R, Bergner A, Argani P. Metanephric stromal tumor arising in a patient with neurofibromatosis type 1 syndrome. International Journal of Surgical Pathology. 19: 667-71. PMID 19875383 DOI: 10.1177/1066896909344850  0.28
2021 Deng Y, McDonald OG, Means AL, Peek RM, Washington MK, Acra SA, Polk DB, Yan F. Exposure to p40 in early life prevents intestinal inflammation in adulthood through inducing a long-lasting epigenetic imprint on TGFβ: Sustained TGFβ production by neonatal p40 exposure. Cellular and Molecular Gastroenterology and Hepatology. PMID 33482393 DOI: 10.1016/j.jcmgh.2021.01.004  0.01
2021 Phifer CJ, Bergdorf KN, Bechard ME, Vilgelm A, Baregamian N, McDonald OG, Lee E, Weiss VL. Obtaining patient-derived cancer organoid cultures via fine-needle aspiration. Star Protocols. 2: 100220. PMID 33377121 DOI: 10.1016/j.xpro.2020.100220  0.01
2020 Montgomery EA, Arnold CA, Lam-Himlin DM, McDonald OG, Poveda JC, Salimian KJ, Voltaggio L, Waters KM, Wood LD, Singhi AD. Some Morphology Frontiers of Dysplasia in the Tubular Gastrointestinal Tract: The Rodger C. Haggitt Memorial Lecture. The American Journal of Surgical Pathology. PMID 33284191 DOI: 10.1097/PAS.0000000000001637  0.01
2020 McDonald OG. Cancer metastasis: selectable traits without genetic constraints. Molecular & Cellular Oncology. 7: 1825910. PMID 33241112 DOI: 10.1080/23723556.2020.1825910  0.01
2020 Bechard ME, Smalling R, Hayashi A, Zhong Y, Word AE, Campbell SL, Tran AV, Weiss VL, Iacobuzio-Donahue C, Wellen KE, McDonald OG. Pancreatic cancers suppress negative feedback of glucose transport to reprogram chromatin for metastasis. Nature Communications. 11: 4055. PMID 32792504 DOI: 10.1038/s41467-020-17839-5  0.01
2020 Vilgelm AE, Bergdorf K, Wolf M, Bharti V, Shattuck-Brandt R, Blevins A, Jones C, Phifer C, Lee M, Lowe C, Hongo R, Boyd K, Netterville J, Rohde S, Idrees K, ... ... McDonald OG, et al. Fine-Needle Aspiration-Based Patient-Derived Cancer Organoids. Iscience. 23: 101408. PMID 32771978 DOI: 10.1016/J.Isci.2020.101408  0.01
2019 Deng Y, Liu LG, McDonald OG, Wilson KT, Peek RM, Li H, Polk DB, Yan F. Tu1857 – Neonatal Supplementation with a Lactobacillus Rhamnosus Gg (LGG)-Derived Protein, P40, Stimulates Persistent Induction of Regulatory T Cells in the Intestine Through Epigenetic Programming in Intestinal Epithelial Cells Gastroenterology. 156: S-1149. DOI: 10.1016/S0016-5085(19)39843-9  0.01
2018 Bechard ME, Word AE, Tran AV, Liu X, Locasale JW, McDonald OG. Pentose conversions support the tumorigenesis of pancreatic cancer distant metastases. Oncogene. PMID 29849117 DOI: 10.1038/s41388-018-0346-5  0.01
2018 Ludwik KA, McDonald OG, Brenin DR, Lannigan DA. ERα-mediated nuclear sequestration of RSK2 is required for ER+ breast cancer tumorigenesis. Cancer Research. PMID 29351904 DOI: 10.1158/0008-5472.Can-17-2063  0.01
2017 VandenBussche CJ, Adams CL, McDonald OG, Whitworth SA, Ali SZ. The fine needle aspiration of translocation sarcomas. Cytopathology : Official Journal of the British Society For Clinical Cytology. PMID 28718513 DOI: 10.1111/cyt.12446  0.01
2017 Li C, Singh B, Graves-Deal R, Ma H, Starchenko A, Fry WH, Lu Y, Wang Y, Bogatcheva G, Khan MP, Milne GL, Zhao S, Ayers GD, Li N, Hu H, ... ... McDonald OG, et al. Three-dimensional culture system identifies a new mode of cetuximab resistance and disease-relevant genes in colorectal cancer. Proceedings of the National Academy of Sciences of the United States of America. PMID 28320945 DOI: 10.1073/Pnas.1618297114  0.01
2017 McDonald OG, Li X, Saunders T, Tryggvadottir R, Mentch SJ, Warmoes MO, Word AE, Carrer A, Salz TH, Natsume S, Stauffer KM, Makohon-Moore A, Zhong Y, Wu H, Wellen KE, et al. Epigenomic reprogramming during pancreatic cancer progression links anabolic glucose metabolism to distant metastasis. Nature Genetics. PMID 28092686 DOI: 10.1038/ng.3753  0.01
2016 Sue PK, Salazar-Austin NM, McDonald OG, Rishi A, Cornish TC, Arav-Boger R. Cytomegalovirus Enterocolitis in Immunocompetent Young Children: A Report of Two Cases and Review of the Literature. The Pediatric Infectious Disease Journal. 35: 573-6. PMID 26862673 DOI: 10.1097/Inf.0000000000001080  0.01
2016 Breton Toral A, Trejo Estrada SR, McDonald AG. Lactic Acid Production from Potato Peel Waste, Spent Coffee Grounds and Almond Shells with Undefined Mixed Cultures Isolated from Coffee Mucilage from Coatepec Mexico Fermentation Technology. 6. DOI: 10.4172/2167-7972.1000139  0.01
2015 Ma C, Park JY, Montgomery EA, Arnold CA, McDonald OG, Liu TC, Salaria SN, Limketkai BN, McGrath KM, Musahl T, Singhi AD. A Comparative Clinicopathologic Study of Collagenous Gastritis in Children and Adults: The Same Disorder With Associated Immune-mediated Diseases. The American Journal of Surgical Pathology. 39: 802-12. PMID 25871617 DOI: 10.1097/PAS.0000000000000441  0.01
2014 Timp W, Bravo HC, McDonald OG, Goggins M, Umbricht C, Zeiger M, Feinberg AP, Irizarry RA. Large hypomethylated blocks as a universal defining epigenetic alteration in human solid tumors. Genome Medicine. 6: 61. PMID 25191524 DOI: 10.1186/S13073-014-0061-Y  0.01
2014 Prusevich P, Kalin JH, Ming SA, Basso M, Givens J, Li X, Hu J, Taylor MS, Cieniewicz AM, Hsiao PY, Huang R, Roberson H, Adejola N, Avery LB, Casero RA, ... ... McDonald OG, et al. A selective phenelzine analogue inhibitor of histone demethylase LSD1. Acs Chemical Biology. 9: 1284-93. PMID 24707965 DOI: 10.1021/Cb500018S  0.01
2012 McDonald OG, Maitra A, Hruban RH. Human correlates of provocative questions in pancreatic pathology. Advances in Anatomic Pathology. 19: 351-62. PMID 23060061 DOI: 10.1097/PAP.0b013e318273f998  0.01
2011 McDonald OG, Wu H, Timp W, Doi A, Feinberg AP. Genome-scale epigenetic reprogramming during epithelial-to-mesenchymal transition. Nature Structural & Molecular Biology. 18: 867-74. PMID 21725293 DOI: 10.1038/nsmb.2084  0.01
2002 McDonald OG, Krynetski EY, Evans WE. Molecular haplotyping of genomic DNA for multiple single-nucleotide polymorphisms located kilobases apart using long-range polymerase chain reaction and intramolecular ligation. Pharmacogenetics. 12: 93-9. PMID 11875363  0.01
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