Xiaoli Shi, Ph.D. - Publications

Affiliations: 
2005 University of California, Santa Cruz, Santa Cruz, CA, United States 
Area:
Nutrition, Molecular Biology

57 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Lin W, Zhang H, Zhang W, Qi H, Zhang G, Qian J, Li X, Qin L, Li H, Wang X, Qiu H, Shi X, Zheng W, Zhang D, Gao R, et al. In vivo degradation and endothelialization of an iron bioresorbable scaffold. Bioactive Materials. 6: 1028-1039. PMID 33102944 DOI: 10.1016/j.bioactmat.2020.09.020  0.52
2020 Leng Y, Chen R, Chen R, He S, Shi X, Zhou X, Zhang Z, Chen AF. HMGB1 mediates homocysteine-induced endothelial cells pyroptosis via cathepsin V-dependent pathway. Biochemical and Biophysical Research Communications. PMID 32912629 DOI: 10.1016/j.bbrc.2020.08.091  0.52
2020 Yang Z, Zhang M, Yu Y, Shi X. Temperature triggers the annual cycle of Microcystis, comparable results from the laboratory and a large shallow lake. Chemosphere. 260: 127543. PMID 32659542 DOI: 10.1016/j.chemosphere.2020.127543  0.44
2020 Liu C, Shi X, Wu F, Ren M, Gao G, Wu Q. Genome analyses provide insights into the evolution and adaptation of the eukaryotic Picophytoplankton Mychonastes homosphaera. Bmc Genomics. 21: 477. PMID 32652928 DOI: 10.1186/s12864-020-06891-6  0.52
2020 Liu C, Shi X, Wu F, Zhang M, Gao G, Wu Q. Temporal patterns in the interaction between photosynthetic picoeukaryotes and their attached fungi in Lake Chaohu. Fems Microbiology Ecology. PMID 32556146 DOI: 10.1093/femsec/fiaa123  0.52
2019 Shi X, Li S, Zhang M, Liu C, Wu Q. Temperature mainly determines the temporal succession of the photosynthetic picoeukaryote community in Lake Chaohu, a highly eutrophic shallow lake. The Science of the Total Environment. 702: 134803. PMID 31731125 DOI: 10.1016/j.scitotenv.2019.134803  0.52
2019 Shi X, Li S, Li H, Chen F, Wu Q. The Community Structure of Picophytoplankton in Lake Fuxian, a Deep and Oligotrophic Mountain Lake. Frontiers in Microbiology. 10: 2016. PMID 31551958 DOI: 10.3389/fmicb.2019.02016  0.52
2019 Fan F, Shi X, Zhang M, Liu C, Chen K. Comparison of algal harvest and hydrogen peroxide treatment in mitigating cyanobacterial blooms via an in situ mesocosm experiment. The Science of the Total Environment. 694: 133721. PMID 31400686 DOI: 10.1016/j.scitotenv.2019.133721  0.44
2018 Zhou H, Chen A, Shen J, Zhang X, Hou M, Li J, Chen J, Zou H, Zhang Y, Deng Q, She K, Shi X, He J. Long non-coding RNA LOC285194 functions as a tumor suppressor by targeting p53 in non-small cell lung cancer. Oncology Reports. PMID 30542733 DOI: 10.3892/or.2018.6839  0.36
2018 Shi X, Tan H, Le X, Xian H, Li X, Huang K, Luo VY, Liu Y, Wu Z, Mo H, Chen AM, Liang Y, Zhang J. An expression signature model to predict lung adenocarcinoma-specific survival. Cancer Management and Research. 10: 3717-3732. PMID 30288103 DOI: 10.2147/CMAR.S159563  0.36
2018 Zhang M, Shi X, Yang Z, Yu Y, Shi L, Qin B. Long-term dynamics and drivers of phytoplankton biomass in eutrophic Lake Taihu. The Science of the Total Environment. 645: 876-886. PMID 30032083 DOI: 10.1016/j.scitotenv.2018.07.220  0.44
2018 Shi L, Huang Y, Zhang M, Shi X, Cai Y, Gao S, Tang X, Chen F, Lu Y, Kong F. Large buoyant particles dominated by cyanobacterial colonies harbor distinct bacterial communities from small suspended particles and free-living bacteria in the water column. Microbiologyopen. e00608. PMID 29573241 DOI: 10.1002/mbo3.608  0.52
2018 Shi X, Li S, Liu C, Zhang M, Liu M. Community structure of photosynthetic picoeukaryotes differs in lakes with different trophic statuses along the middle-lower reaches of the Yangtze River. Fems Microbiology Ecology. PMID 29360960 DOI: 10.1093/femsec/fiy011  0.52
2018 Chen M, Wang J, Luo Y, Huang K, Shi X, Liu Y, Li J, Lai Z, Xue S, Gao H, Chen A, Chen D. Identify Down syndrome transcriptome associations using integrative analysis of microarray database and correlation-interaction network. Human Genomics. 12: 2. PMID 29351810 DOI: 10.1186/s40246-018-0133-y  0.36
2017 Zhang M, Straile D, Chen F, Shi X, Yang Z, Cai Y, Yu J, Kong F. Dynamics and drivers of phytoplankton richness and composition along productivity gradient. The Science of the Total Environment. 625: 275-284. PMID 29289776 DOI: 10.1016/j.scitotenv.2017.12.288  0.52
2017 Shi X, Li S, Wei L, Qin B, Brookes JD. CO2 alters community composition of freshwater phytoplankton: A microcosm experiment. The Science of the Total Environment. 607: 69-77. PMID 28688257 DOI: 10.1016/j.scitotenv.2017.06.224  0.52
2017 Wang C, Yang D, Jiang L, Wang S, Wang J, Zhou K, Shi X, Chang L, Liu Y, Ke Y, Liu H. Jesridonin in combination with paclitaxel demonstrates synergistic anti-tumor activity in human esophageal carcinoma cells. Bioorganic & Medicinal Chemistry Letters. PMID 28285918 DOI: 10.1016/j.bmcl.2017.02.008  0.36
2017 Li S, Bronner G, Lepère C, Kong F, Shi X. Temporal and spatial variations in the composition of freshwater photosynthetic picoeukaryotes revealed by MiSeq sequencing from flow cytometry sorted samples. Environmental Microbiology. PMID 28276185 DOI: 10.1111/1462-2920.13724  0.52
2016 Wang C, Wang R, Zhou K, Wang S, Wang J, Shi H, Dou Y, Yang D, Chang L, Shi X, Liu Y, Xu X, Zhang X, Ke Y, Liu H. JD enhances the anti-tumour effects of low-dose paclitaxel on gastric cancer MKN45 cells both in vitro and in vivo. Cancer Chemotherapy and Pharmacology. PMID 27620208 DOI: 10.1007/s00280-016-3149-9  0.36
2016 Jin X, Liang N, Wang M, Meng Y, Jia B, Shi X, Li S, Luo J, Luo Y, Cui Q, Zheng K, Liu Z, Shi J, Li F, Wang F, et al. Integrin Imaging with (99m)Tc-3PRGD2 SPECT/CT Shows High Specificity in the Diagnosis of Lymph Node Metastasis from Non-Small Cell Lung Cancer. Radiology. 150813. PMID 27479638 DOI: 10.1148/radiol.2016150813  0.76
2016 Yang Z, Zhang M, Shi X, Kong F, Ma R, Yu Y. Nutrient reduction magnifies the impact of extreme weather on cyanobacterial bloom formation in large shallow Lake Taihu (China). Water Research. 103: 302-310. PMID 27474940 DOI: 10.1016/j.watres.2016.07.047  0.44
2016 Chen C, Yang Z, Kong F, Zhang M, Yu Y, Shi X. Growth, physiochemical and antioxidant responses of overwintering benthic cyanobacteria to hydrogen peroxide. Environmental Pollution (Barking, Essex : 1987). PMID 27352766 DOI: 10.1016/j.envpol.2016.06.043  0.44
2016 Chu W, Wei W, Yu S, Han H, Shi X, Sun W, Gao Y, Zhang L, Chen J. C2C12 myotubes inhibit the proliferation and differentiation of 3T3-L1 preadipocytes by reducing the expression of glucocorticoid receptor gene. Biochemical and Biophysical Research Communications. PMID 26896766 DOI: 10.1016/j.bbrc.2016.02.063  0.52
2016 Chen D, Li Y, Fang T, Shi X, Chen X. Specific roles of tocopherols and tocotrienols in seed longevity and germination tolerance to abiotic stress in transgenic rice. Plant Science : An International Journal of Experimental Plant Biology. 244: 31-9. PMID 26810451 DOI: 10.1016/j.plantsci.2015.12.005  0.32
2016 Guan WJ, Shi X, Jiang CY, Xie YQ, Zhu Z, Gao Y, Zheng JP. Responsiveness to methacholine, but not leukotriene D4 , correlates with fractional exhaled nitric oxide in asthma. The Clinical Respiratory Journal. 10: 176-80. PMID 25103494 DOI: 10.1111/crj.12199  0.76
2015 Shi X, Gao X, Zhang L, Li Y, Fan L, Yu HZ. Binary DNA hairpin-based colorimetric biochip for simultaneous detection of Pb(2+) and Hg(2+) in real-world samples. The Analyst. 140: 2608-12. PMID 25685863 DOI: 10.1039/c5an00120j  0.52
2015 Jiang L, Liang W, Shen J, Chen X, Shi X, He J, Yang C, He J. The Impact of Visceral Pleural Invasion In Node-negative Non-small-cell Lung cancer: A Systematic Review and Meta-analysis. Chest. PMID 25675151 DOI: 10.1378/chest.14-2765  0.32
2015 Liang W, Zhang L, Jiang G, Wang Q, Liu L, Liu D, Wang Z, Zhu Z, Deng Q, Xiong X, Shao W, Shi X, He J. Development and validation of a nomogram for predicting survival in patients with resected non-small-cell lung cancer. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 33: 861-9. PMID 25624438 DOI: 10.1200/JCO.2014.56.6661  0.76
2015 Yu L, Kong F, Shi X, Yang Z, Zhang M, Yu Y. Effects of elevated CO2 on dynamics of microcystin-producing and non-microcystin-producing strains during Microcystis blooms. Journal of Environmental Sciences (China). 27: 251-8. PMID 25597684 DOI: 10.1016/j.jes.2014.05.047  0.44
2015 Zhang L, Li X, Li Y, Shi X, Yu HZ. Indirect competitive assays on DVD for direct multiplex detection of drugs of abuse in oral fluids. Analytical Chemistry. 87: 1896-902. PMID 25540088 DOI: 10.1021/ac5040715  0.52
2015 Yang Z, Kong F, Shi X, Yu Y, Zhang M. Effects of UV-B radiation on microcystin production of a toxic strain of Microcystis aeruginosa and its competitiveness against a non-toxic strain. Journal of Hazardous Materials. 283: 447-53. PMID 25464282 DOI: 10.1016/j.jhazmat.2014.09.053  0.44
2015 Guan WJ, Shi X, Zheng JP, Gao Y, Jiang CY, Xie YQ, Liu QX, Zhu Z, Guo E, An JY, Yu XX, Liu WT, Zhong NS. Leukotriene D4 inhalation challenge for predicting short-term efficacy of montelukast: a pilot study. The Clinical Respiratory Journal. 9: 111-20. PMID 24506412 DOI: 10.1111/crj.12117  0.76
2014 Li J, Miao N, Liu M, Cui W, Liu X, Li X, Shi X, Qing S, Ma Y, Zhang W, Biekemituofu H. Clinical significance of chromosome 1p/19q loss of heterozygosity and Sox17 expression in oligodendrogliomas. International Journal of Clinical and Experimental Pathology. 7: 8609-15. PMID 25674225  0.52
2014 Yu L, Kong F, Zhang M, Yang Z, Shi X, Du M. The dynamics of microcystis genotypes and microcystin production and associations with environmental factors during blooms in Lake Chaohu, China. Toxins. 6: 3238-57. PMID 25474494 DOI: 10.3390/toxins6123238  0.44
2014 Chen S, Qian J, Shi X, Gao T, Liang T, Liu C. Control of hepatic gluconeogenesis by the promyelocytic leukemia zinc finger protein. Molecular Endocrinology (Baltimore, Md.). 28: 1987-98. PMID 25333514 DOI: 10.1210/me.2014-1164  0.44
2014 Guan WJ, Zheng JP, Shi X, Xie YQ, Jiang CY, Gao Y, Zhu Z, An JY, Yu XX, Liu WT. Response--dose ratio is a surrogate of cumulative provocative dosage for bronchial provocation tests in asthma. Lung. 192: 701-9. PMID 24958577 DOI: 10.1007/s00408-014-9612-7  0.76
2014 Chen D, Chen H, Zhang L, Shi X, Chen X. Tocopherol-deficient rice plants display increased sensitivity to photooxidative stress. Planta. 239: 1351-62. PMID 24691571 DOI: 10.1007/s00425-014-2064-8  0.52
2013 Wu P, Zhang Y, Sun Y, Shi X, Li F, Zhu Z. Clinical applications of 18F-FDG PET/CT in monitoring anti-cancer therapies. Current Pharmaceutical Biotechnology. 14: 658-68. PMID 24372234  0.76
2013 Guan WJ, Zheng JP, Gao Y, Jiang CY, Xie YQ, Shi X, Zhu Z, An JY, Yu XX, Liu WT, Zhong NS. Responsiveness to leukotriene D4 and methacholine for predicting efficacy of montelukast in asthma. Journal of Thoracic Disease. 5: 298-301. PMID 23825762 DOI: 10.3978/j.issn.2072-1439.2013.02.01  0.76
2013 Qian J, Chen S, Huang Y, Shi X, Liu C. PGC-1α regulates hepatic hepcidin expression and iron homeostasis in response to inflammation. Molecular Endocrinology (Baltimore, Md.). 27: 683-92. PMID 23438894 DOI: 10.1210/me.2012-1345  0.44
2013 Wu C, Ma G, Li J, Zheng K, Dang Y, Shi X, Sun Y, Li F, Zhu Z. In vivo cell tracking via ¹⁸F-fluorodeoxyglucose labeling: a review of the preclinical and clinical applications in cell-based diagnosis and therapy. Clinical Imaging. 37: 28-36. PMID 23206605 DOI: 10.1016/j.clinimag.2012.02.023  0.76
2013 Zhu Z, Sun MM, Su C, Zhao H, Ma X, Zhu Z, Shi X, Gu K. One-pot quantitative hydrolysis of lignocelluloses mediated by black liquor. Bioresource Technology. 128: 229-34. PMID 23196243 DOI: 10.1016/j.biortech.2012.10.072  0.76
2012 Shi X, Shao M, Zhang L, Ma Y, Zhang Z. Screening of genes related to sulfide metabolism in Urechis unicinctus (Echiura, Urechidae) using suppression subtractive hybridization and cDNA microarray analysis. Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics. 7: 254-9. PMID 22591583 DOI: 10.1016/j.cbd.2012.04.001  0.52
2012 Zhang M, Duan H, Shi X, Yu Y, Kong F. Contributions of meteorology to the phenology of cyanobacterial blooms: implications for future climate change. Water Research. 46: 442-52. PMID 22123520 DOI: 10.1016/j.watres.2011.11.013  0.44
2012 Guan J, Tong W, Ding W, Du S, Xiao Z, Han Q, Zhu Z, Bao X, Shi X, Wu C, Cao J, Yang Y, Ma W, Li G, Yao Y, et al. Neuronal regeneration and protection by collagen-binding BDNF in the rat middle cerebral artery occlusion model. Biomaterials. 33: 1386-95. PMID 22098777 DOI: 10.1016/j.biomaterials.2011.10.073  0.76
2011 Zhang M, Shi X, Yu Y, Kong F. THE ACCLIMATIVE CHANGES IN PHOTOCHEMISTRY AFTER COLONY FORMATION OF THE CYANOBACTERIA MICROCYSTIS AERUGINOSA(1). Journal of Phycology. 47: 524-532. PMID 27021981 DOI: 10.1111/j.1529-8817.2011.00987.x  0.44
2010 Scharber MC, Koppe M, Gao J, Cordella F, Loi MA, Denk P, Morana M, Egelhaaf HJ, Forberich K, Dennler G, Gaudiana R, Waller D, Zhu Z, Shi X, Brabec CJ. Influence of the bridging atom on the performance of a low-bandgap bulk heterojunction solar cell. Advanced Materials (Deerfield Beach, Fla.). 22: 367-70. PMID 20217720 DOI: 10.1002/adma.200900529  0.76
2008 Yang Z, Kong F, Shi X, Zhang M, Xing P, Cao H. CHANGES IN THE MORPHOLOGY AND POLYSACCHARIDE CONTENT OF MICROCYSTIS AERUGINOSA (CYANOBACTERIA) DURING FLAGELLATE GRAZING(1). Journal of Phycology. 44: 716-20. PMID 27041430 DOI: 10.1111/j.1529-8817.2008.00502.x  0.44
2008 Zhang Y, Xiong J, Wang J, Shi X, Bao G, Zhang Y, Zhu Z. Regulation of melanocyte apoptosis by Stathmin 1 expression. Bmb Reports. 41: 765-70. PMID 19017487 DOI: 10.5483/BMBRep.2008.41.11.765  0.76
2008 Shi X, Chen F, Yu J, Xu Y, Zhang S, Chen YG, Fang X. Study of interaction between Smad7 and DNA by single-molecule force spectroscopy. Biochemical and Biophysical Research Communications. 377: 1284-7. PMID 18992714 DOI: 10.1016/j.bbrc.2008.10.145  0.52
2008 Chen Z, Chen H, Meng H, Xing G, Gao X, Sun B, Shi X, Yuan H, Zhang C, Liu R, Zhao F, Zhao Y, Fang X. Bio-distribution and metabolic paths of silica coated CdSeS quantum dots. Toxicology and Applied Pharmacology. 230: 364-71. PMID 18495192 DOI: 10.1016/j.taap.2008.03.022  0.32
2005 Yu J, Wang J, Lin W, Li S, Li H, Zhou J, Ni P, Dong W, Hu S, Zeng C, Zhang J, Zhang Y, Li R, Xu Z, Li S, ... ... Shi X, et al. The Genomes of Oryza sativa: a history of duplications. Plos Biology. 3: e38. PMID 15685292 DOI: 10.1371/journal.pbio.0030038  0.52
2003 Shi X, Stoj C, Romeo A, Kosman DJ, Zhu Z. Fre1p Cu2+ reduction and Fet3p Cu1+ oxidation modulate copper toxicity in Saccharomyces cerevisiae. The Journal of Biological Chemistry. 278: 50309-15. PMID 12954629 DOI: 10.1074/jbc.M307019200  0.76
2003 Shi X, Chabarek K, Budai A, Zhu Z. Iron requirement for GAL gene induction in the yeast Saccharomyces cerevisiae. The Journal of Biological Chemistry. 278: 43110-3. PMID 12944385 DOI: 10.1074/jbc.M307011200  0.76
2003 Friess H, Zhu Z, Liard V, Shi X, Shrikhande SV, Wang L, Lieb K, Korc M, Palma C, Zimmermann A, Reubi JC, Büchler MW. Neurokinin-1 receptor expression and its potential effects on tumor growth in human pancreatic cancer. Laboratory Investigation; a Journal of Technical Methods and Pathology. 83: 731-42. PMID 12746482 DOI: 10.1097/01.LAB.0000067499.57309.F6  0.76
2003 Zhu Z, Friess H, Shi X, Wang L, di Mola FF, Wirtz M, Hartel M, Wagner M, Zimmermann A, Müller M, Büchler MW. Up-regulation of p75 neurotrophin receptor (p75NTR) is associated with apoptosis in chronic pancreatitis. Digestive Diseases and Sciences. 48: 717-25. PMID 12741461  0.76
2002 Yonkovich J, McKenndry R, Shi X, Zhu Z. Copper ion-sensing transcription factor Mac1p post-translationally controls the degradation of its target gene product Ctr1p. The Journal of Biological Chemistry. 277: 23981-4. PMID 12011036 DOI: 10.1074/jbc.C200203200  0.76
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