Ganiraju Manyam, Ph.D. - Publications

2009 George Mason University, Washington, DC 
Bioinformatics Biology, Oncology, Molecular Biology

30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Lee MS, McGuffey EJ, Morris JS, Manyam G, Baladandayuthapani V, Wei W, Morris VK, Overman MJ, Maru DM, Jiang ZQ, Hamilton SR, Kopetz S. Association of CpG island methylator phenotype and EREG/AREG methylation and expression in colorectal cancer. British Journal of Cancer. PMID 27272216 DOI: 10.1038/bjc.2016.87  0.36
2016 Jarrar M, Behl S, Manyam G, Ganah H, Nazir M, Nasab R, Moustafa K. Cytochrome allelic variants and clopidogrel metabolism in cardiovascular diseases therapy. Molecular Biology Reports. PMID 27072373 DOI: 10.1007/s11033-016-3983-1  0.36
2016 Rao A, Manyam G, Rao G, Jain R. Integrative Analysis of mRNA, microRNA, and Protein Correlates of Relative Cerebral Blood Volume Values in GBM Reveals the Role for Modulators of Angiogenesis and Tumor Proliferation. Cancer Informatics. 15: 29-33. PMID 27053917 DOI: 10.4137/CIN.S33014  0.36
2016 Zoh RS, Mallick B, Ivanov I, Baladandayuthapani V, Manyam G, Chapkin RS, Lampe JW, Carroll RJ. PCAN: Probabilistic correlation analysis of two non-normal data sets. Biometrics. PMID 27037601 DOI: 10.1111/biom.12516  0.36
2016 Ceccarelli M, Barthel FP, Malta TM, Sabedot TS, Salama SR, Murray BA, Morozova O, Newton Y, Radenbaugh A, Pagnotta SM, Anjum S, Wang J, Manyam G, Zoppoli P, Ling S, et al. Molecular Profiling Reveals Biologically Discrete Subsets and Pathways of Progression in Diffuse Glioma. Cell. 164: 550-563. PMID 26824661 DOI: 10.1016/j.cell.2015.12.028  0.36
2015 Ye Q, Xu-Monette ZY, Tzankov A, Deng L, Wang X, Manyam GC, Visco C, Montes-Moreno S, Zhang L, Dybkær K, Chiu A, Orazi A, Zu Y, Bhagat G, Richards KL, et al. Prognostic impact of concurrent MYC and BCL6 rearrangements and expression in de novo diffuse large B-cell lymphoma. Oncotarget. PMID 26573234 DOI: 10.18632/oncotarget.6262  0.36
2015 Xu-Monette ZY, Dabaja BS, Wang X, Tu M, Manyam GC, Tzankov A, Xia Y, Zhang L, Sun R, Visco C, Dybkaer K, Yin L, Chiu A, Orazi A, Zu Y, et al. Clinical features, tumor biology, and prognosis associated with MYC rearrangement and Myc overexpression in diffuse large B-cell lymphoma patients treated with rituximab-CHOP. Modern Pathology : An Official Journal of the United States and Canadian Academy of Pathology, Inc. PMID 26541272 DOI: 10.1038/modpathol.2015.118  0.36
2015 Guinney J, Dienstmann R, Wang X, de Reyniès A, Schlicker A, Soneson C, Marisa L, Roepman P, Nyamundanda G, Angelino P, Bot BM, Morris JS, Simon IM, Gerster S, Fessler E, ... ... Manyam GC, et al. The consensus molecular subtypes of colorectal cancer. Nature Medicine. PMID 26457759 DOI: 10.1038/nm.3967  0.36
2015 Liu Z, Xu-Monette ZY, Cao X, Manyam GC, Wang X, Tzankov A, Xia Y, Li X, Visco C, Sun R, Zhang L, Montes-Moreno S, Dybkær K, Chiu A, Orazi A, et al. Prognostic and biological significance of survivin expression in patients with diffuse large B-cell lymphoma treated with rituximab-CHOP therapy. Modern Pathology : An Official Journal of the United States and Canadian Academy of Pathology, Inc. PMID 26248897 DOI: 10.1038/modpathol.2015.94  0.36
2015 Tetzlaff MT, Curry JL, Yin V, Pattanaprichakul P, Manonukul J, Uiprasertkul M, Manyam GC, Wani KM, Aldape K, Zhang L, Prieto VG, Esmaeli B. Distinct pathways in the pathogenesis of sebaceous carcinomas implicated by differentially expressed microRNAs. Jama Ophthalmology. 133: 1109-16. PMID 26203913 DOI: 10.1001/jamaophthalmol.2015.2310  0.36
2015 Ok CY, Xu-Monette ZY, Li L, Manyam GC, Montes-Moreno S, Tzankov A, Visco C, Dybkær K, Routbort MJ, Zhang L, Chiu A, Orazi A, Zu Y, Bhagat G, Richards KL, et al. Evaluation of NF-κB subunit expression and signaling pathway activation demonstrates that p52 expression confers better outcome in germinal center B-cell-like diffuse large B-cell lymphoma in association with CD30 and BCL2 functions. Modern Pathology : An Official Journal of the United States and Canadian Academy of Pathology, Inc. PMID 26111978 DOI: 10.1038/modpathol.2015.76  0.36
2015 Ok CY, Ye Q, Li L, Manyam GC, Deng L, Goswami RR, Wang X, Montes-Moreno S, Visco C, Tzankov A, Dybkaer K, Zhang L, Abramson J, Sohani AR, Chiu A, et al. Age cutoff for Epstein-Barr virus-positive diffuse large B-cell lymphoma - is it necessary? Oncotarget. 6: 13935-13946. PMID 26101854  0.36
2015 Manyam G, Birerdinc A, Baranova A. KPP: KEGG Pathway Painter. Bmc Systems Biology. 9: S3. PMID 25879163 DOI: 10.1186/1752-0509-9-S2-S3  0.56
2015 Chen J, Xu-Monette ZY, Deng L, Shen Q, Manyam GC, Martinez-Lopez A, Zhang L, Montes-Moreno S, Visco C, Tzankov A, Yin L, Dybkaer K, Chiu A, Orazi A, Zu Y, et al. Dysregulated CXCR4 expression promotes lymphoma cell survival and independently predicts disease progression in germinal center B-cell-like diffuse large B-cell lymphoma. Oncotarget. 6: 5597-614. PMID 25704881  0.36
2014 Zhang L, Baladandayuthapani V, Mallick BK, Manyam GC, Thompson PA, Bondy ML, Do KA. Bayesian hierarchical structured variable selection methods with application to MIP studies in breast cancer. Journal of the Royal Statistical Society. Series C, Applied Statistics. 63: 595-620. PMID 25705056 DOI: 10.1111/rssc.12053  0.36
2014 Ok CY, Chen J, Xu-Monette ZY, Tzankov A, Manyam GC, Li L, Visco C, Montes-Moreno S, Dybkær K, Chiu A, Orazi A, Zu Y, Bhagat G, Richards KL, Hsi ED, et al. Clinical implications of phosphorylated STAT3 expression in De Novo diffuse large B-cell lymphoma. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 20: 5113-23. PMID 25124685 DOI: 10.1158/1078-0432.CCR-14-0683  0.36
2014 Zuo X, Xu M, Yu J, Wu Y, Moussalli MJ, Manyam GC, Lee SI, Liang S, Gagea M, Morris JS, Broaddus RR, Shureiqi I. Potentiation of colon cancer susceptibility in mice by colonic epithelial PPAR-δ/β overexpression. Journal of the National Cancer Institute. 106: dju052. PMID 24681603 DOI: 10.1093/jnci/dju052  0.36
2014 Ok CY, Li L, Xu-Monette ZY, Visco C, Tzankov A, Manyam GC, Montes-Moreno S, Dybkaer K, Dybaer K, Chiu A, Orazi A, Zu Y, Bhagat G, Chen J, Richards KL, et al. Prevalence and clinical implications of epstein-barr virus infection in de novo diffuse large B-cell lymphoma in Western countries. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 20: 2338-49. PMID 24583797 DOI: 10.1158/1078-0432.CCR-13-3157  0.36
2013 Jennings EM, Morris JS, Carroll RJ, Manyam GC, Baladandayuthapani V. Bayesian methods for expression-based integration of various types of genomics data. Eurasip Journal On Bioinformatics & Systems Biology. 2013: 13. PMID 24053265 DOI: 10.1186/1687-4153-2013-13  0.36
2013 Xu-Monette ZY, Møller MB, Tzankov A, Montes-Moreno S, Hu W, Manyam GC, Kristensen L, Fan L, Visco C, Dybkaer K, Chiu A, Tam W, Zu Y, Bhagat G, Richards KL, et al. MDM2 phenotypic and genotypic profiling, respective to TP53 genetic status, in diffuse large B-cell lymphoma patients treated with rituximab-CHOP immunochemotherapy: a report from the International DLBCL Rituximab-CHOP Consortium Program. Blood. 122: 2630-40. PMID 23982177 DOI: 10.1182/blood-2012-12-473702  0.36
2013 Srivastava S, Wang W, Manyam G, Ordonez C, Baladandayuthapani V. Integrating multi-platform genomic data using hierarchical Bayesian relevance vector machines. Eurasip Journal On Bioinformatics & Systems Biology. 2013: 9. PMID 23809014 DOI: 10.1186/1687-4153-2013-9  0.36
2013 Bradburne CE, Verhoeven AB, Manyam GC, Chaudhry SA, Chang EL, Thach DC, Bailey CL, van Hoek ML. Temporal transcriptional response during infection of type II alveolar epithelial cells with Francisella tularensis live vaccine strain (LVS) supports a general host suppression and bacterial uptake by macropinocytosis. The Journal of Biological Chemistry. 288: 10780-91. PMID 23322778 DOI: 10.1074/jbc.M112.362178  0.36
2013 Wang W, Baladandayuthapani V, Morris JS, Broom BM, Manyam G, Do KA. iBAG: integrative Bayesian analysis of high-dimensional multiplatform genomics data. Bioinformatics (Oxford, England). 29: 149-59. PMID 23142963 DOI: 10.1093/bioinformatics/bts655  0.36
2012 Manyam G, Payton MA, Roth JA, Abruzzo LV, Coombes KR. Relax with CouchDB--into the non-relational DBMS era of bioinformatics. Genomics. 100: 1-7. PMID 22609849 DOI: 10.1016/j.ygeno.2012.05.006  0.36
2011 Baranova A, Bode J, Manyam G, Emelianenko M. An efficient algorithm for systematic analysis of nucleotide strings suitable for siRNA design. Bmc Research Notes. 4: 168. PMID 21619643 DOI: 10.1186/1756-0500-4-168  0.36
2011 Pierson T, Matrakas D, Taylor YU, Manyam G, Morozov VN, Zhou W, van Hoek ML. Proteomic characterization and functional analysis of outer membrane vesicles of Francisella novicida suggests possible role in virulence and use as a vaccine. Journal of Proteome Research. 10: 954-67. PMID 21138299 DOI: 10.1021/pr1009756  0.36
2010 Birerdinc A, Nohelty E, Marakhonov A, Manyam G, Panov I, Coon S, Nikitin E, Skoblov M, Chandhoke V, Baranova A. Pro-apoptotic and antiproliferative activity of human KCNRG, a putative tumor suppressor in 13q14 region. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. 31: 33-45. PMID 20237900 DOI: 10.1007/s13277-009-0005-0  0.36
2010 Birerdinc A, Afendy A, Stepanova M, Younossi I, Manyam G, Baranova A, Younossi ZM. Functional pathway analysis of genes associated with response to treatment for chronic hepatitis C. Journal of Viral Hepatitis. 17: 730-6. PMID 20002302 DOI: 10.1111/j.1365-2893.2009.01235.x  0.56
2009 Manyam G, Baranova A, Skoblov M, Mishra RK. SnS-Align: a graphic tool for alignment of distantly related proteins. International Journal of Bioinformatics Research and Applications. 5: 663-73. PMID 19887339  0.56
2009 Younossi ZM, Baranova A, Afendy A, Collantes R, Stepanova M, Manyam G, Bakshi A, Sigua CL, Chan JP, Iverson AA, Santini CD, Chang SY. Early gene expression profiles of patients with chronic hepatitis C treated with pegylated interferon-alfa and ribavirin. Hepatology (Baltimore, Md.). 49: 763-74. PMID 19140155 DOI: 10.1002/hep.22729  0.36
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