Dan Bradley - Publications

Affiliations: 
Genetics Trinity College, Dublin, Dublin, County Dublin, Ireland 

28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Zheng Z, Wang X, Li M, Li Y, Yang Z, Wang X, Pan X, Gong M, Zhang Y, Guo Y, Wang Y, Liu J, Cai Y, Chen Q, Okpeku M, ... ... Bradley DG, et al. The origin of domestication genes in goats Science Advances. 6: eaaz5216. DOI: 10.1126/sciadv.aaz5216  0.407
2019 Frantz LAF, Haile J, Lin AT, Scheu A, Geörg C, Benecke N, Alexander M, Linderholm A, Mullin VE, Daly KG, Battista VM, Price M, Gron KJ, Alexandri P, Arbogast RM, ... ... Bradley DG, et al. Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe. Proceedings of the National Academy of Sciences of the United States of America. PMID 31405970 DOI: 10.1073/Pnas.1901169116  0.322
2018 Cahill JA, Heintzman PD, Harris K, Teasdale MD, Kapp J, Soares AER, Stirling I, Bradley D, Edwards CJ, Graim K, Kisleika AA, Malev AV, Monaghan N, Green RE, Shapiro B. Genomic evidence of widespread admixture from polar bears into brown bears during the last ice age. Molecular Biology and Evolution. PMID 29471451 DOI: 10.1093/Molbev/Msy018  0.369
2015 Park SD, Magee DA, McGettigan PA, Teasdale MD, Edwards CJ, Lohan AJ, Murphy A, Braud M, Donoghue MT, Liu Y, Chamberlain AT, Rue-Albrecht K, Schroeder S, Spillane C, Tai S, ... Bradley DG, et al. Genome sequencing of the extinct Eurasian wild aurochs, Bos primigenius, illuminates the phylogeography and evolution of cattle. Genome Biology. 16: 234. PMID 26498365 DOI: 10.1186/s13059-015-0790-2  0.337
2015 Kassahun Y, Mattiangeli V, Ameni G, Hailu E, Aseffa A, Young DB, Hewinson RG, Vordermeier HM, Bradley DG. Admixture mapping of tuberculosis and pigmentation-related traits in an African-European hybrid cattle population. Frontiers in Genetics. 6: 210. PMID 26124773 DOI: 10.3389/fgene.2015.00210  0.327
2015 Teasdale MD, van Doorn NL, Fiddyment S, Webb CC, O'Connor T, Hofreiter M, Collins MJ, Bradley DG. Paging through history: parchment as a reservoir of ancient DNA for next generation sequencing. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 370: 20130379. PMID 25487331 DOI: 10.1098/Rstb.2013.0379  0.385
2014 Sanderson ND, Norman PJ, Guethlein LA, Ellis SA, Williams C, Breen M, Park SD, Magee DA, Babrzadeh F, Warry A, Watson M, Bradley DG, MacHugh DE, Parham P, Hammond JA. Definition of the cattle killer cell Ig-like receptor gene family: comparison with aurochs and human counterparts. Journal of Immunology (Baltimore, Md. : 1950). 193: 6016-30. PMID 25398326 DOI: 10.4049/Jimmunol.1401980  0.377
2014 Purfield DC, Bradley DG, Kearney JF, Berry DP. Genome-wide association study for calving traits in Holstein-Friesian dairy cattle Animal. 8: 224-235. PMID 24256561 DOI: 10.1017/S175173111300195X  0.311
2013 Meredith BK, Berry DP, Kearney F, Finlay EK, Fahey AG, Bradley DG, Lynn DJ. A genome-wide association study for somatic cell score using the Illumina high-density bovine beadchip identifies several novel QTL potentially related to mastitis susceptibility. Frontiers in Genetics. 4: 229. PMID 24223582 DOI: 10.3389/Fgene.2013.00229  0.338
2013 Connell S, Meade KG, Allan B, Lloyd AT, Downing T, O'Farrelly C, Bradley DG. Genome-wide association analysis of avian resistance to Campylobacter jejuni colonization identifies risk locus spanning the CDH13 gene. G3 (Bethesda, Md.). 3: 881-90. PMID 23550144 DOI: 10.1534/G3.113.006031  0.633
2012 le Roex N, Noyes H, Brass A, Bradley DG, Kemp SJ, Kay S, van Helden PD, Hoal EG. Novel SNP Discovery in African Buffalo, Syncerus caffer, using high-throughput Sequencing. Plos One. 7: e48792. PMID 23144973 DOI: 10.1371/journal.pone.0048792  0.342
2012 Connell S, Meade KG, Allan B, Lloyd AT, Kenny E, Cormican P, Morris DW, Bradley DG, O'Farrelly C. Avian resistance to Campylobacter jejuni colonization is associated with an intestinal immunogene expression signature identified by mRNA sequencing. Plos One. 7: e40409. PMID 22870198 DOI: 10.1371/Journal.Pone.0040409  0.355
2011 Noyes H, Brass A, Obara I, Anderson S, Archibald AL, Bradley DG, Fisher P, Freeman A, Gibson J, Gicheru M, Hall L, Hanotte O, Hulme H, McKeever D, Murray C, et al. Genetic and expression analysis of cattle identifies candidate genes in pathways responding to Trypanosoma congolense infection. Proceedings of the National Academy of Sciences of the United States of America. 108: 9304-9. PMID 21593421 DOI: 10.1073/pnas.1013486108  0.346
2010 Tong P, Prendergast JG, Lohan AJ, Farrington SM, Cronin S, Friel N, Bradley DG, Hardiman O, Evans A, Wilson JF, Loftus B. Sequencing and analysis of an Irish human genome. Genome Biology. 11: R91. PMID 20822512 DOI: 10.1186/Gb-2010-11-9-R91  0.357
2010 Downing T, Lloyd AT, O'Farrelly C, Bradley DG. The differential evolutionary dynamics of avian cytokine and TLR gene classes. Journal of Immunology (Baltimore, Md. : 1950). 184: 6993-7000. PMID 20483729 DOI: 10.4049/Jimmunol.0903092  0.668
2010 Downing T, O'Farrelly C, Bhuiyan AK, Silva P, Naqvi AN, Sanfo R, Sow RS, Podisi B, Hanotte O, Bradley DG. Variation in chicken populations may affect the enzymatic activity of lysozyme. Animal Genetics. 41: 213-7. PMID 19845599 DOI: 10.1111/J.1365-2052.2009.01974.X  0.626
2009 Downing T, Cormican P, O'Farrelly C, Bradley DG, Lloyd AT. Evidence of the adaptive evolution of immune genes in chicken. Bmc Research Notes. 2: 254. PMID 20003477 DOI: 10.1186/1756-0500-2-254  0.682
2009 Cormican P, Lloyd AT, Downing T, Connell SJ, Bradley D, O'Farrelly C. The avian Toll-Like receptor pathway--subtle differences amidst general conformity. Developmental and Comparative Immunology. 33: 967-73. PMID 19539094 DOI: 10.1016/J.Dci.2009.04.001  0.66
2009 Downing T, Lynn DJ, Connell S, Lloyd AT, Bhuiyan AK, Silva P, Naqvi AN, Sanfo R, Sow RS, Podisi B, Hanotte O, O'Farrelly C, Bradley DG. Evidence of balanced diversity at the chicken interleukin 4 receptor alpha chain locus. Bmc Evolutionary Biology. 9: 136. PMID 19527513 DOI: 10.1186/1471-2148-9-136  0.677
2009 Gibbs RA, Taylor JF, Van Tassell CP, Barendse W, Eversole KA, Gill CA, Green RD, Hamernik DL, Kappes SM, Lien S, Matukumalli LK, McEwan JC, Nazareth LV, Schnabel RD, ... ... Bradley DG, et al. Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds. Science (New York, N.Y.). 324: 528-32. PMID 19390050 DOI: 10.1126/Science.1167936  0.327
2009 Downing T, Lynn DJ, Connell S, Lloyd AT, Bhuiyan AK, Silva P, Naqvi AN, Sanfo R, Sow RS, Podisi B, O'Farrelly C, Hanotte O, Bradley DG. Contrasting evolution of diversity at two disease-associated chicken genes. Immunogenetics. 61: 303-14. PMID 19247647 DOI: 10.1007/S00251-009-0359-X  0.673
2008 Freeman AR, Lynn DJ, Murray C, Bradley DG. Detecting the effects of selection at the population level in six bovine immune genes. Bmc Genetics. 9: 62. PMID 18838007 DOI: 10.1186/1471-2156-9-62  0.32
2008 Cronin S, Berger S, Ding J, Schymick JC, Washecka N, Hernandez DG, Greenway MJ, Bradley DG, Traynor BJ, Hardiman O. A genome-wide association study of sporadic ALS in a homogenous Irish population. Human Molecular Genetics. 17: 768-74. PMID 18057069 DOI: 10.1093/Hmg/Ddm361  0.316
2007 Cruz F, Bradley DG, Lynn DJ. Evidence of positive selection on the Atlantic salmon CD3gammadelta gene. Immunogenetics. 59: 225-32. PMID 17211637 DOI: 10.1007/s00251-006-0188-0  0.349
2006 Mattiangeli V, Ryan AW, McManus R, Bradley DG. A genome-wide approach to identify genetic loci with a signature of natural selection in the Irish population. Genome Biology. 7: R74. PMID 16904005 DOI: 10.1186/gb-2006-7-8-r74  0.301
2005 Dolan C, O'Halloran A, Bradley DG, Croke DT, Evans A, O'Brien JK, Dicker P, Shields DC. Genetic stratification of pathogen-response-related and other variants within a homogeneous Caucasian Irish population. European Journal of Human Genetics : Ejhg. 13: 798-806. PMID 15785776 DOI: 10.1038/Sj.Ejhg.5201382  0.318
2000 Richards MB, Macaulay V, Hickey E, Vega E, Sykes B, Guida V, Rengo C, Sellitto D, Cruciani F, Kivisild T, Villems R, Thomas M, Rychkov S, Rychkov O, Rychkov Y, ... ... Bradley D, et al. Tracing European founder lineages in the Near Eastern mtDNA pool. American Journal of Human Genetics. 67: 1251-1276. DOI: 10.1016/S0002-9297(07)62954-1  0.35
1995 Teale AJ, Wambugu J, Gwakisa PS, Stranzinger G, Bradley D, Kemp SJ. A polymorphism in randomly amplified DNA that differentiates the Y chromosomes of Bos indicus and Bos taurus. Animal Genetics. 26: 243-8. PMID 7661396 DOI: 10.1111/J.1365-2052.1995.Tb03251.X  0.336
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