Jason A. Bubier, Ph.D. - Publications

2004 Marquette University, Milwaukee, WI, United States 
Molecular Biology

43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Russell JT, Zhou Y, Weinstock GM, Bubier JA. The Gut Microbiome and Substance Use Disorder. Frontiers in Neuroscience. 15: 725500. PMID 34531718 DOI: 10.3389/fnins.2021.725500  1
2021 Hitzemann R, Bergeson SE, Berman AE, Bubier JA, Chesler EJ, Finn DA, Hein M, Hoffman P, Holmes A, Kisby BR, Lockwood D, Lodowski KH, McManus M, Owen JA, Ozburn AR, et al. Sex Differences in the Brain Transcriptome Related to Alcohol Effects and Alcohol Use Disorder. Biological Psychiatry. PMID 34274109 DOI: 10.1016/j.biopsych.2021.04.016  1
2021 Bubier JA, Chesler EJ, Weinstock GM. Host genetic control of gut microbiome composition. Mammalian Genome : Official Journal of the International Mammalian Genome Society. PMID 34159422 DOI: 10.1007/s00335-021-09884-2  1
2021 Palmer RHC, Benca-Bachman CE, Huggett SB, Bubier JA, McGeary JE, Ramgiri N, Srijeyanthan J, Yang J, Visscher PM, Yang J, Knopik VS, Chesler EJ. Multi-omic and multi-species meta-analyses of nicotine consumption. Translational Psychiatry. 11: 98. PMID 33542196 DOI: 10.1038/s41398-021-01231-y  1
2020 Bubier JA, He H, Philip VM, Roy T, Hernandez CM, Bernat R, Donohue KD, O'Hara BF, Chesler EJ. Genetic variation regulates opioid-induced respiratory depression in mice. Scientific Reports. 10: 14970. PMID 32917924 DOI: 10.1038/S41598-020-71804-2  1
2020 Ouellette AR, Neuner SM, Dumitrescu L, Anderson LC, Gatti DM, Mahoney ER, Bubier JA, Churchill G, Peters L, Huentelman MJ, Herskowitz JH, Yang HS, Smith AN, Reitz C, Kunkle BW, et al. Cross-Species Analyses Identify Dlgap2 as a Regulator of Age-Related Cognitive Decline and Alzheimer's Dementia. Cell Reports. 32: 108091. PMID 32877673 DOI: 10.1016/J.Celrep.2020.108091  1
2020 Reynolds T, Johnson E, Huggett S, Bubier JA, Palmer RHC, Agrawal A, Baker EJ, Chesler EJ. Interpretation of psychiatric genome-wide association studies with multispecies heterogeneous functional genomic data integration. Neuropsychopharmacology : Official Publication of the American College of Neuropsychopharmacology. PMID 32791514 DOI: 10.1038/S41386-020-00795-5  1
2020 Bubier JA, Philip VM, Dickson PE, Mittleman G, Chesler EJ. Discovery of a Role for in Habituation and Cocaine Induced Locomotor Activation in Mice Using Heterogeneous Functional Genomic Analysis. Frontiers in Neuroscience. 14: 721. PMID 32742255 DOI: 10.3389/Fnins.2020.00721  1
2020 Huggett SB, Bubier JA, Chesler EJ, Palmer RHC. Do gene expression findings from mouse models of cocaine use recapitulate human cocaine use disorder in reward circuitry? Genes, Brain, and Behavior. e12689. PMID 32720468 DOI: 10.1111/Gbb.12689  1
2020 Datta U, Schoenrock SE, Bubier JA, Bogue MA, Jentsch JD, Logan RW, Tarantino LM, Chesler EJ. Prospects for finding the mechanisms of sex differences in addiction with human and model organism genetic analysis. Genes, Brain, and Behavior. PMID 32012419 DOI: 10.1111/Gbb.12645  1
2020 Bubier JA, Philip VM, Quince C, Campbell J, Zhou Y, Vishnivetskaya T, Duvvuru S, Hageman Blair R, Ndukum J, Donohue KD, Foster CM, Mellert DJ, Weinstock G, Culiat CT, O'Hara B, et al. A Microbe Associated with Sleep Revealed by a Novel Systems-Genetic Analysis of the Microbiome in Collaborative Cross Mice. Genetics. PMID 31896565 DOI: 10.1534/Genetics.119.303013  1
2019 Phillips CA, Wang K, Baker EJ, Bubier JA, Chesler EJ, Langston MA. On Finding and Enumerating Maximal and Maximum -Partite Cliques in -Partite Graphs. Algorithms. 12. PMID 31448059 DOI: 10.3390/A12010023  1
2019 Recla JM, Bubier JA, Gatti DM, Ryan JL, Long KH, Robledo RF, Glidden NC, Hou G, Churchill GA, Maser RS, Zhang ZW, Young EE, Chesler EJ, Bult CJ. Genetic mapping in Diversity Outbred mice identifies a Trpa1 variant influencing late-phase formalin response. Pain. 160: 1740-1753. PMID 31335644 DOI: 10.1097/J.Pain.0000000000001571  1
2019 Li Q, Philip VM, Stearns TM, Bubier JA, King BL, Low BE, Wiles MV, Saeidian AH, Sundberg BA, Uitto J, Sundberg JP. Quantitative Trait Locus and Integrative Genomics Revealed Candidate Modifier Genes for Ectopic Mineralization in Mouse Models of Pseudoxanthoma Elasticum. The Journal of Investigative Dermatology. PMID 31207231 DOI: 10.1016/J.Jid.2019.04.023  1
2019 Bubier JA, Sutphin GL, Reynolds TJ, Korstanje R, Fuksman-Kumpa A, Baker EJ, Langston MA, Chesler EJ. Integration of heterogeneous functional genomics data in gerontology research to find genes and pathway underlying aging across species. Plos One. 14: e0214523. PMID 30978202 DOI: 10.1371/Journal.Pone.0214523  1
2019 Recla JM, Bubier JA, Gatti DM, Ryan JL, Long KH, Robledo RF, Glidden NC, Hou G, Churchill GA, Maser RS, Zhang ZW, Young EE, Chesler EJ, Bult CJ. Genetic mapping in Diversity Outbred mice identifies a Trpa1 variant influencing late-phase formalin response. Pain. PMID 30925521 DOI: 10.1097/j.pain.0000000000001571  1
2019 Bubier J, Hill D, Mukherjee G, Reynolds T, Baker EJ, Berger A, Emerson J, Blake JA, Chesler EJ. Curating gene sets: challenges and opportunities for integrative analysis. Database : the Journal of Biological Databases and Curation. 2019. PMID 30888410 DOI: 10.1093/Database/Baz036  1
2019 Palmer R, Benca-Bachman C, Bubier J, Ramgiri N, Srijeyanthan J, Chesler E. Cross-Species Prioritization Of Genomic Loci For Nicotine & Alcohol Use Disorders European Neuropsychopharmacology. 29. DOI: 10.1016/J.Euroneuro.2019.07.025  1
2017 Delprato A, Algéo MP, Bonheur B, Bubier JA, Lu L, Williams RW, Chesler EJ, Crusio WE. QTL and Systems Genetics Analysis of Mouse Grooming and Behavioral Responses to Novelty in an Open Field. Genes, Brain, and Behavior. PMID 28544613 DOI: 10.1111/Gbb.12392  1
2017 Bubier JA, Langston MA, Baker EJ, Chesler EJ. Integrative Functional Genomics for Systems Genetics in GeneWeaver.org. Methods in Molecular Biology (Clifton, N.J.). 1488: 131-152. PMID 27933523 DOI: 10.1007/978-1-4939-6427-7_6  1
2016 Srivastava AK, Wang Y, Huang R, Skinner C, Thompson T, Pollard L, Wood T, Luo F, Stevenson R, Polimanti R, Gelernter J, Lin X, Lim IY, Wu Y, Teh AL, ... ... Bubier JA, et al. Human genome meeting 2016: Houston, TX, USA. 28 February - 2 March 2016 Human Genomics. 10: 12-12. PMID 27294413 DOI: 10.1186/S40246-016-0063-5  1
2016 Bubier JA, Wilcox TD, Jay JJ, Langston MA, Baker EJ, Chesler EJ. Cross-Species Integrative Functional Genomics in GeneWeaver Reveals a Role for Pafah1b1 in Altered Response to Alcohol. Frontiers in Behavioral Neuroscience. 10: 1. PMID 26834590 DOI: 10.3389/Fnbeh.2016.00001  1
2015 Baker E, Bubier JA, Reynolds T, Langston MA, Chesler EJ. GeneWeaver: data driven alignment of cross-species genomics in biology and disease. Nucleic Acids Research. PMID 26656951 DOI: 10.1093/Nar/Gkv1329  1
2015 Dickson PE, Miller MM, Calton MA, Bubier JA, Cook MN, Goldowitz D, Chesler EJ, Mittleman G. Systems genetics of intravenous cocaine self-administration in the BXD recombinant inbred mouse panel. Psychopharmacology. PMID 26581503 DOI: 10.1007/S00213-015-4147-Z  1
2015 Bubier JA, Phillips CA, Langston MA, Baker EJ, Chesler EJ. GeneWeaver: finding consilience in heterogeneous cross-species functional genomics data. Mammalian Genome : Official Journal of the International Mammalian Genome Society. PMID 26092690 DOI: 10.1007/S00335-015-9575-X  1
2014 Baker E, Culpepper C, Philips C, Bubier J, Langston M, Chesler E. Identifying common components across biological network graphs using a bipartite data model. Bmc Proceedings. 8: S4. PMID 25374613 DOI: 10.1186/1753-6561-8-S6-S4  1
2014 Bubier JA, Jay JJ, Baker CL, Bergeson SE, Ohno H, Metten P, Crabbe JC, Chesler EJ. Identification of a QTL in Mus musculus for alcohol preference, withdrawal, and Ap3m2 expression using integrative functional genomics and precision genetics. Genetics. 197: 1377-93. PMID 24923803 DOI: 10.1534/Genetics.114.166165  1
2014 Sproule TJ, Bubier JA, Grandi FC, Sun VZ, Philip VM, McPhee CG, Adkins EB, Sundberg JP, Roopenian DC. Molecular identification of collagen 17a1 as a major genetic modifier of laminin gamma 2 mutation-induced junctional epidermolysis bullosa in mice. Plos Genetics. 10: e1004068. PMID 24550734 DOI: 10.1371/Journal.Pgen.1004068  1
2014 Bubier J, Langston M, Baker E, Chesler E. Integrative functional genomic analysis using GeneWeaver F1000research. 5. DOI: 10.7490/F1000Research.1097189.1  1
2013 McPhee CG, Bubier JA, Sproule TJ, Park G, Steinbuck MP, Schott WH, Christianson GJ, Morse HC, Roopenian DC. IL-21 is a double-edged sword in the systemic lupus erythematosus-like disease of BXSB.Yaa mice. Journal of Immunology (Baltimore, Md. : 1950). 191: 4581-8. PMID 24078696 DOI: 10.4049/Jimmunol.1300439  1
2013 Logan RW, Robledo RF, Recla JM, Philip VM, Bubier JA, Jay JJ, Harwood C, Wilcox T, Gatti DM, Bult CJ, Churchill GA, Chesler EJ. High-precision genetic mapping of behavioral traits in the diversity outbred mouse population. Genes, Brain, and Behavior. 12: 424-37. PMID 23433259 DOI: 10.1111/Gbb.12029  1
2012 Bubier JA, Chesler EJ. Accelerating discovery for complex neurological and behavioral disorders through systems genetics and integrative genomics in the laboratory mouse. Neurotherapeutics : the Journal of the American Society For Experimental Neurotherapeutics. 9: 338-48. PMID 22422471 DOI: 10.1007/S13311-012-0111-3  1
2012 Chesler EJ, Plitt A, Fisher D, Hurd B, Lederle L, Bubier JA, Kiselycznyk C, Holmes A. Quantitative trait loci for sensitivity to ethanol intoxication in a C57BL/6J×129S1/SvImJ inbred mouse cross. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 23: 305-21. PMID 22371272 DOI: 10.1007/S00335-012-9394-2  1
2012 Taylor DK, Bubier JA, Silva KA, Sundberg JP. Development, structure, and keratin expression in C57BL/6J mouse eccrine glands. Veterinary Pathology. 49: 146-54. PMID 22135020 DOI: 10.1177/0300985811430511  1
2012 Baker EJ, Jay JJ, Bubier JA, Langston MA, Chesler EJ. GeneWeaver: a web-based system for integrative functional genomics. Nucleic Acids Research. 40: D1067-76. PMID 22080549 DOI: 10.1093/Nar/Gkr968  1
2012 Sullivan C, Chen Y, Guo Z, Shan Y, Peng C, Zhang H, Bubier J, Sproule T, Roopenian D, Li S. Nfkb1 Plays a Tumor-Suppressing Role in BCR-ABL-Induced Leukemias Blood. 120: 1666-1666. DOI: 10.1182/Blood.V120.21.1666.1666  0.01
2011 McPhee CG, Sproule TJ, Shin DM, Bubier JA, Schott WH, Steinbuck MP, Avenesyan L, Morse HC, Roopenian DC. MHC class I family proteins retard systemic lupus erythematosus autoimmunity and B cell lymphomagenesis. Journal of Immunology (Baltimore, Md. : 1950). 187: 4695-704. PMID 21964024 DOI: 10.4049/Jimmunol.1101776  1
2011 Derbyshire K, Addey C, Coe D, Stuckey DW, Muezzin H, Bubier JA, Shaffer DJ, Roopenian DC, Chai JG, Scott DM. Molecular mechanisms of induction of antigen-specific allograft tolerance by intranasal peptide administration. Journal of Immunology (Baltimore, Md. : 1950). 186: 5719-28. PMID 21490154 DOI: 10.4049/Jimmunol.1002444  1
2010 Bubier JA, Sproule TJ, Alley LM, Webb CM, Fine JD, Roopenian DC, Sundberg JP. A mouse model of generalized non-Herlitz junctional epidermolysis bullosa. The Journal of Investigative Dermatology. 130: 1819-28. PMID 20336083 DOI: 10.1038/Jid.2010.46  1
2009 Bubier JA, Sproule TJ, Foreman O, Spolski R, Shaffer DJ, Morse HC, Leonard WJ, Roopenian DC. A critical role for IL-21 receptor signaling in the pathogenesis of systemic lupus erythematosus in BXSB-Yaa mice. Proceedings of the National Academy of Sciences of the United States of America. 106: 1518-23. PMID 19164519 DOI: 10.1073/Pnas.0807309106  1
2008 Ghim S, Jenson AB, Bubier JA, Silva KA, Smith RS, Sundberg JP. Cataracts in transgenic mice caused by a human papillomavirus type 18 E7 oncogene driven by KRT1-14. Experimental and Molecular Pathology. 85: 77-82. PMID 18723014 DOI: 10.1016/J.Yexmp.2008.07.004  1
2007 Bubier JA, Bennett SM, Sproule TJ, Lyons BL, Olland S, Young DA, Roopenian DC. Treatment of BXSB-Yaa mice with IL-21R-Fc fusion protein minimally attenuates systemic lupus erythematosus. Annals of the New York Academy of Sciences. 1110: 590-601. PMID 17911475 DOI: 10.1196/Annals.1423.063  1
2004 Bubier JA, Schläppi M. Cold induction of EARLI1 , a putative Arabidopsis lipid transfer protein, is light and calcium dependent Plant Cell and Environment. 27: 929-936. DOI: 10.1111/J.1365-3040.2004.01198.X  0.2
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