Yoram Groner - Related publications

Weizmann Institute of Science, Rehovot, Israel 
Genetics, Cell Biology
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33 most relevant papers in past 60 days:
Year Citation  Score
2021 Miao Z, Balzer MS, Ma Z, Liu H, Wu J, Shrestha R, Aranyi T, Kwan A, Kondo A, Pontoglio M, Kim J, Li M, Kaestner KH, Susztak K. Single cell regulatory landscape of the mouse kidney highlights cellular differentiation programs and disease targets. Nature Communications. 12: 2277. PMID 33859189 DOI: 10.1038/s41467-021-22266-1   
2021 Li S, Wen Z, Ghalandari B, Zhou T, Warden AR, Zhang T, Dai P, Yu Y, Guo W, Liu M, Xie H, Ding X. Single-Cell Immunoblotting based on a Photoclick Hydrogel Enables High-Throughput Screening and Accurate Profiling of Exogenous Gene Expression. Advanced Materials (Deerfield Beach, Fla.). e2101108. PMID 33899289 DOI: 10.1002/adma.202101108   
2021 Wuelling M, Neu C, Thiesen AM, Kitanovski S, Cao Y, Lange A, Westendorf AM, Hoffmann D, Vortkamp A. Epigenetic Mechanisms Mediating Cell State Transitions in Chondrocytes. Journal of Bone and Mineral Research : the Official Journal of the American Society For Bone and Mineral Research. PMID 33534175 DOI: 10.1002/jbmr.4263   
2021 Panigrahi A, O'Malley BW. Mechanisms of enhancer action: the known and the unknown. Genome Biology. 22: 108. PMID 33858480 DOI: 10.1186/s13059-021-02322-1   
2021 Kim HJ, Tam PPL, Yang P. Defining cell identity beyond the premise of differential gene expression. Cell Regeneration (London, England). 10: 20. PMID 33931812 DOI: 10.1186/s13619-021-00083-7   
2021 Yeung TK, Lau HW, Ma HT, Poon RYC. One-step multiplex toolkit for efficient generation of conditional gene silencing human cell lines. Molecular Biology of the Cell. mbcE21020051. PMID 33979199 DOI: 10.1091/mbc.E21-02-0051   
2021 Zhou M, Xu Q, Huang D, Luo L. Regulation of gene transcription of B lymphoma Mo-MLV insertion region 1 homolog (Review). Biomedical Reports. 14: 52. PMID 33884195 DOI: 10.3892/br.2021.1428   
2021 Fan K, Moore JE, Zhang XO, Weng Z. Genetic and epigenetic features of promoters with ubiquitous chromatin accessibility support ubiquitous transcription of cell-essential genes. Nucleic Acids Research. PMID 33978759 DOI: 10.1093/nar/gkab345   
2021 Górska AM, Gouveia P, Borba AR, Zimmermann A, Serra TS, Carvalho P, Lourenço TF, Oliveira MM, Peterhänsel C, Saibo NJM. ZmOrphan94 Transcription Factor Downregulates Gene Expression in Maize Bundle Sheath Cells. Frontiers in Plant Science. 12: 559967. PMID 33897718 DOI: 10.3389/fpls.2021.559967   
2021 Xu J, Liu H, Lan Y, Jiang R. -Repression of Expression Affects -Mediated Gene Expression in Palate Development. Frontiers in Cell and Developmental Biology. 9: 665109. PMID 33898467 DOI: 10.3389/fcell.2021.665109   
2021 Li WF, Kang Y, Zhang Y, Zang QL, Qi LW. Concerted control of the LaRAV1-LaCDKB1;3 module by temperature during dormancy release and reactivation of larch. Tree Physiology. PMID 33847364 DOI: 10.1093/treephys/tpab052   
2021 Ing-Simmons E, Vaid R, Bing XY, Levine M, Mannervik M, Vaquerizas JM. Independence of chromatin conformation and gene regulation during Drosophila dorsoventral patterning. Nature Genetics. 53: 487-499. PMID 33795866 DOI: 10.1038/s41588-021-00799-x   
2021 Cao R, Liu S, Zhang J, Ren X, Chen X, Cheng B, Xia J. Integrative Analysis of TP53INP2 in Head and Neck Squamous Cell Carcinoma. Frontiers in Genetics. 12: 630794. PMID 33897760 DOI: 10.3389/fgene.2021.630794   
2021 Chen Z, Yang Z, Yuan X, Zhang X, Hao P. scSensitiveGeneDefine: sensitive gene detection in single-cell RNA sequencing data by Shannon entropy. Bmc Bioinformatics. 22: 211. PMID 33888056 DOI: 10.1186/s12859-021-04136-1   
2021 Qiu Y, Wang J, Lei J, Roeder K. Identification of cell-type-specific marker genes from co-expression patterns in tissue samples. Bioinformatics (Oxford, England). PMID 33904573 DOI: 10.1093/bioinformatics/btab257   
2021 Harris BD, Crow M, Fischer S, Gillis J. Single-cell co-expression analysis reveals that transcriptional modules are shared across cell types in the brain. Cell Systems. PMID 34015329 DOI: 10.1016/j.cels.2021.04.010   
2021 Golicz AA, Allu AD, Li W, Lohani N, Singh MB, Bhalla PL. A dynamic intron retention program regulates the expression of several hundred genes during pollen meiosis. Plant Reproduction. PMID 34019149 DOI: 10.1007/s00497-021-00411-6   
2021 Farnsworth DR, Posner M, Miller AC. Single cell transcriptomics of the developing zebrafish lens and identification of putative controllers of lens development. Experimental Eye Research. 206: 108535. PMID 33705730 DOI: 10.1016/j.exer.2021.108535   
2021 Wu W, Liu Y, Dai Q, Yan X, Wang Z. G2S3: A gene graph-based imputation method for single-cell RNA sequencing data. Plos Computational Biology. 17: e1009029. PMID 34003861 DOI: 10.1371/journal.pcbi.1009029   
2021 Hua L, Stevenson SR, Reyna-Llorens I, Xiong H, Kopriva S, Hibberd JM. The bundle sheath of rice is conditioned to play an active role in water transport as well as sulfur assimilation and jasmonic acid synthesis. The Plant Journal : For Cell and Molecular Biology. PMID 33901336 DOI: 10.1111/tpj.15292   
2021 Torcal Garcia G, Graf T. The transcription factor code: a beacon for histone methyltransferase docking. Trends in Cell Biology. PMID 34016504 DOI: 10.1016/j.tcb.2021.04.001   
2021 Patel YD, Brown AJ, Zhu J, Rosignoli G, Gibson SJ, Hatton D, James DC. Control of Multigene Expression Stoichiometry in Mammalian Cells Using Synthetic Promoters. Acs Synthetic Biology. PMID 33939428 DOI: 10.1021/acssynbio.0c00643   
2021 Aguilar R, Bustos FJ, Nardocci G, van Zundert B, Montecino M. Epigenetic silencing of the osteoblast-lineage gene program during hippocampal maturation. Journal of Cellular Biochemistry. 122: 367-384. PMID 33135214 DOI: 10.1002/jcb.29865   
2021 Akinci E, Hamilton MC, Khowpinitchai B, Sherwood RI. Using CRISPR to understand and manipulate gene regulation. Development (Cambridge, England). 148. PMID 33913466 DOI: 10.1242/dev.182667   
2021 Ruf-Zamojski F, Zhang Z, Zamojski M, Smith GR, Mendelev N, Liu H, Nudelman G, Moriwaki M, Pincas H, Castanon RG, Nair VD, Seenarine N, Amper MAS, Zhou X, Ongaro L, et al. Single nucleus multi-omics regulatory landscape of the murine pituitary. Nature Communications. 12: 2677. PMID 33976139 DOI: 10.1038/s41467-021-22859-w   
2021 Yang Y, Cai Y, Zhang Y, Yi X, Xu Z. Identification of Molecular Subtypes and Key Genes of Atherosclerosis Through Gene Expression Profiles. Frontiers in Molecular Biosciences. 8: 628546. PMID 33996893 DOI: 10.3389/fmolb.2021.628546   
2021 Shen J, Zhang H, Lu C, Gu J, Zhang Y, Hu J. Microarray analysis of the time-dependent expression profiles of long non-coding RNAs in the progression of vein graft stenotic disease. Experimental and Therapeutic Medicine. 21: 635. PMID 33968166 DOI: 10.3892/etm.2021.10067   
2021 Patel N, Bush WS. Modeling transcriptional regulation using gene regulatory networks based on multi-omics data sources. Bmc Bioinformatics. 22: 200. PMID 33874910 DOI: 10.1186/s12859-021-04126-3   
2021 Marand AP, Chen Z, Gallavotti A, Schmitz RJ. A cis-regulatory atlas in maize at single-cell resolution. Cell. PMID 33964211 DOI: 10.1016/j.cell.2021.04.014   
2021 Dwyer K, Agarwal N, Pile L, Ansari A. Gene Architecture Facilitates Intron-Mediated Enhancement of Transcription. Frontiers in Molecular Biosciences. 8: 669004. PMID 33968994 DOI: 10.3389/fmolb.2021.669004   
2021 Simmons A, Palecek SP. Rational, unbiased selection of reference genes for pluripotent stem cell-derived cardiomyocytes. Tissue Engineering. Part C, Methods. PMID 33843289 DOI: 10.1089/ten.TEC.2021.0023   
2021 Aladdin A, Sahly N, Faty R, Youssef MM, Salem TZ. The baculovirus promoter OpIE2 sequence has inhibitory effect on the activity of the cytomegalovirus (CMV) promoter in HeLa and HEK-293 T cells. Gene. 781: 145541. PMID 33667607 DOI: 10.1016/j.gene.2021.145541   
2021 Huang D, Kosentka PZ, Liu W. Synthetic biology approaches in regulation of targeted gene expression. Current Opinion in Plant Biology. 63: 102036. PMID 33930839 DOI: 10.1016/j.pbi.2021.102036