Zhiping Deng, Ph.D. - Publications

2003 Purdue University, West Lafayette, IN, United States 
Plant Physiology, Plant Culture Agriculture

53 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Hu Y, Mu H, Deng Z. The transcription factor TEAD4 enhances lung adenocarcinoma progression through enhancing PKM2 mediated glycolysis. Cell Biology International. PMID 34196069 DOI: 10.1002/cbin.11654  0.52
2021 Bi Y, Deng Z, Ni W, Shrestha R, Savage D, Hartwig T, Patil S, Hong SH, Zhang Z, Oses-Prieto JA, Li KH, Quail PH, Burlingame AL, Xu SL, Wang ZY. Arabidopsis ACINUS is O-glycosylated and regulates transcription and alternative splicing of regulators of reproductive transitions. Nature Communications. 12: 945. PMID 33574257 DOI: 10.1038/s41467-021-20929-7  1
2020 Deng Z, Huang Z, Ding Y, Su Y, Chan CM, Niu X. High-Grade Surface Osteosarcoma: Clinical Features and Oncologic Outcome. Journal of Bone Oncology. 23: 100288. PMID 32953434 DOI: 10.1016/j.jbo.2020.100288  0.64
2020 Han C, Liu Y, Shi W, Qiao Y, Wang L, Tian Y, Fan M, Deng Z, Lau OS, De Jaeger G, Bai MY. KIN10 promotes stomatal development through stabilization of the SPEECHLESS transcription factor. Nature Communications. 11: 4214. PMID 32843632 DOI: 10.1038/S41467-020-18048-W  0.56
2020 Deng Z, Gong L, Zhang Q, Hao L, Ding Y, Niu X. Outcome of osteofibrous dysplasia-like versus classic adamantinoma of long bones: a single-institution experience. Journal of Orthopaedic Surgery and Research. 15: 268. PMID 32677983 DOI: 10.1186/s13018-020-01769-5  0.64
2020 Wang Z, Ren Z, Cheng C, Wang T, Ji H, Zhao Y, Deng Z, Zhi L, Lu J, Wu X, Xu S, Cao M, Zhao H, Liu L, Zhu J, et al. Counteraction of ABA-Mediated Inhibition of Seed Germination and Seedling Establishment by ABA Signaling Terminator in Arabidopsis. Molecular Plant. PMID 32619606 DOI: 10.1016/J.Molp.2020.06.011  0.64
2020 Yang Y, Liu X, Wang K, Li J, Zhu G, Ren S, Deng Z, Zhu B, Fu D, Qu G, Luo Y, Zhu H. Molecular and functional diversity of organelle RNA editing mediated by RNA recognition motif-containing protein ORRM4 in tomato. The New Phytologist. PMID 32473605 DOI: 10.1111/nph.16714  0.52
2019 Gong M, Zhu J, Liu M, Liu P, Deng Z, Shen T, Zhao T, Lin R, Lu Y, Yang S, Liang Z, Bak SM, Stavitski E, Wu Q, Adzic RR, et al. Optimizing PtFe intermetallics for oxygen reduction reaction: from DFT screening to in situ XAFS characterization. Nanoscale. PMID 31633704 DOI: 10.1039/C9Nr04975D  0.4
2019 Zhao JL, Zhang LQ, Liu N, Xu S, Yue ZL, Zhang LL, Deng Z, Burlingame AL, Sun DY, Wang ZY, Sun Y, Zhang SW. Mutual regulation of receptor-like kinase SIT1 and B'κ-PP2A shapes the early response of rice to salt stress. The Plant Cell. PMID 31221736 DOI: 10.1105/Tpc.18.00706  1
2019 Zhan Y, Deng Z, Yan Y, Zhang H, Lu C, Yang Z, Shang L, Huang Y, Lv F, Liu Y, Liu Y, Wang S, Chen S, Zhang XX, Cheng Q, et al. NfiR, a new regulatory ncRNA, is required in concert with the NfiS ncRNA for optimal expression of nitrogenase genes in A1501. Applied and Environmental Microbiology. PMID 31076427 DOI: 10.1128/AEM.00762-19  0.48
2019 Zhao J, Xu J, Chen B, Cui W, Zhou Z, Song X, Chen Z, Zheng H, Lin L, Peng J, Lu Y, Deng Z, Chen J, Yan F. Characterization of Proteins Involved in Chloroplast Targeting Disturbed by Rice Stripe Virus by Novel Protoplast⁻Chloroplast Proteomics. International Journal of Molecular Sciences. 20. PMID 30634635 DOI: 10.3390/ijms20020253  0.52
2018 Xia W, Yang Y, Meng Q, Deng Z, Gong M, Wang J, Wang D, Zhu Y, Sun L, Xu F, Li J, Xin HL. Bimetallic Nanoparticle Oxidation in Three Dimensions by Chemically Sensitive Electron Tomography and In-Situ Transmission Electron Microscopy. Acs Nano. PMID 30080965 DOI: 10.1021/Acsnano.8B02170  0.4
2018 Li B, Deng Z, Niu X. The accuracy of free hand resection in limb salvage surgery of bone tumours. International Orthopaedics. PMID 29468264 DOI: 10.1007/s00264-018-3825-y  0.64
2017 Deng Z, Ding Y, Hao L, Zhang Q, Su Y, Niu X. Marrow signal mimicking tumor on MRI T1-weighted imaging after neoadjuvant chemotherapy in extremity osteosarcomas. Journal of Bone Oncology. 6: 22-26. PMID 29021951 DOI: 10.1016/j.jbo.2016.09.001  0.64
2017 Tan J, Zhou Z, Niu Y, Sun X, Deng Z. Identification and Functional Characterization of Tomato CircRNAs Derived from Genes Involved in Fruit Pigment Accumulation. Scientific Reports. 7: 8594. PMID 28819222 DOI: 10.1038/S41598-017-08806-0  0.48
2017 Wang Y, Wang Q, Gao L, Zhu B, Luo Y, Deng Z, Zuo J. Integrative analysis of circRNAs acting as ceRNAs involved in ethylene pathway in tomato. Physiologia Plantarum. PMID 28664538 DOI: 10.1111/ppl.12600  0.52
2017 Gomaa AE, Zhang C, Yang Z, Shang L, Jiang S, Deng Z, Zhan Y, Lu W, Lin M, Yan Y. An enhanced vector-free allele exchange (VFAE) mutagenesis protocol for genome editing in a wide range of bacterial species. Amb Express. 7: 125. PMID 28629206 DOI: 10.1186/s13568-017-0425-y  0.48
2016 Deng Z, Chen H, Chen S. Medium optimization for nitrogen fixer Paenibacillus sp. 1-49. Wei Sheng Wu Xue Bao = Acta Microbiologica Sinica. 56: 1415-25. PMID 29738214  0.36
2016 Zhang F, Zhang Y, Deng Z, Xu P, Zhang X, Jin T, Liu Q. Genetic variants in the acylphosphatase 2 gene and the risk of breast cancer in a Han Chinese population. Oncotarget. PMID 27894080 DOI: 10.18632/oncotarget.13495  0.44
2016 Gomaa AE, Deng Z, Yang Z, Shang L, Zhan Y, Lu W, Lin M, Yan Y. High-frequency Targeted Mutagenesis in Pseudomonas stutzeri Using a Vector-Free Allele Exchange Protocol. Journal of Microbiology and Biotechnology. PMID 27817190 DOI: 10.4014/jmb.1608.08019  0.48
2016 Sun X, Wang L, Ding J, Wang Y, Wang J, Zhang X, Che Y, Liu Z, Zhang X, Ye J, Wang J, Sablok G, Deng Z, Zhao H. Integrative analysis of Arabidopsis thaliana transcriptomics reveals intuitive splicing mechanism for circular RNA. Febs Letters. PMID 27685607 DOI: 10.1002/1873-3468.12440  0.52
2016 Deng Z, Wang ZY, Kutschera U. Seedling development in maize cv. B73 and blue light-mediated proteomic changes in the tip vs. stem of the coleoptile. Protoplasma. PMID 27631339 DOI: 10.1007/S00709-016-1023-6  0.48
2016 Deng Z, Yang H, Liu Q, Wang Z, Feng T, Ouyang Y, Jin T, Ren H. Identification of novel susceptibility markers for the risk of overall breast cancer as well as subtypes defined by hormone receptor status in the Chinese population. Journal of Human Genetics. PMID 27604554 DOI: 10.1038/jhg.2016.97  0.44
2016 Qian H, Zhu K, Lu H, Lavoie M, Chen S, Zhou Z, Deng Z, Chen J, Fu Z. Contrasting silver nanoparticle toxicity and detoxification strategies in Microcystis aeruginosa and Chlorella vulgaris: New insights from proteomic and physiological analyses. The Science of the Total Environment. PMID 27522289 DOI: 10.1016/j.scitotenv.2016.08.039  0.52
2016 Zhan Y, Yan Y, Deng Z, Chen M, Lu W, Lu C, Shang L, Yang Z, Zhang W, Wang W, Li Y, Ke Q, Lu J, Xu Y, Zhang L, et al. The novel regulatory ncRNA, NfiS, optimizes nitrogen fixation via base pairing with the nitrogenase gene nifK mRNA in Pseudomonas stutzeri A1501. Proceedings of the National Academy of Sciences of the United States of America. PMID 27407147 DOI: 10.1073/Pnas.1604514113  0.48
2016 Chen X, Dong Y, Yu C, Fang X, Deng Z, Yan C, Chen J. Analysis of the Proteins Secreted from the Oryza meyeriana Suspension-Cultured Cells Induced by Xanthomonas oryzae pv. oryzae. Plos One. 11: e0154793. PMID 27196123 DOI: 10.1371/Journal.Pone.0154793  0.44
2016 Chen X, Deng Z, Yu C, Yan C, Chen J. Secretome analysis of rice suspension-cultured cells infected by Xanthomonas oryzae pv.oryza (Xoo). Proteome Science. 14: 2. PMID 26839515 DOI: 10.1186/S12953-016-0091-Z  0.44
2016 Huo C, Zhang B, Wang H, Wang F, Liu M, Gao Y, Zhang W, Deng Z, Sun D, Tang W. Comparative study of early cold-regulated proteins by two dimensional difference gel electrophoresis reveals a key role for phospholipase Dα1 in mediating cold acclimation signaling pathway in rice. Molecular & Cellular Proteomics : McP. PMID 26747563 DOI: 10.1074/Mcp.M115.049759  1
2015 Liao H, Wang Z, Deng Z, Ren H, Li X. Curcumin inhibits lung cancer invasion and metastasis by attenuating GLUT1/MT1-MMP/MMP2 pathway. International Journal of Clinical and Experimental Medicine. 8: 8948-57. PMID 26309547  0.64
2015 Ding Y, Sun X, Zhang M, Deng Z, Huang X. [Clinicopathologic study of giant cell lesion of small bones]. Zhonghua Bing Li Xue Za Zhi Chinese Journal of Pathology. 44: 329-331. PMID 26178215  0.48
2015 Xia P, Li B, Geng T, Deng Z, Dang C, Chang D, Kang L, Jin T, Chen C. FGFR2 gene polymorphisms are associated with breast cancer risk in the Han Chinese population. American Journal of Cancer Research. 5: 1854-61. PMID 26175953  0.64
2015 Deng Z, Ding YI, Hao L, Yang F, Gong L, Ding YI, Niu X. Osteoid osteoma of the rib: A report of two cases. Oncology Letters. 9: 1857-1860. PMID 25789056 DOI: 10.3892/ol.2015.2895  0.64
2014 Li X, Deng Z, Liu Z, Yan Y, Wang T, Xie J, Lin M, Cheng Q, Chen S. The genome of Paenibacillus sabinae T27 provides insight into evolution, organization and functional elucidation of nif and nif-like genes. Bmc Genomics. 15: 723. PMID 25163544 DOI: 10.1186/1471-2164-15-723  0.64
2014 Sun X, Yang Q, Deng Z, Ye X. Digital inventory of Arabidopsis transcripts revealed by 61 RNA sequencing samples. Plant Physiology. 166: 869-78. PMID 25118256 DOI: 10.1104/Pp.114.241604  0.48
2014 Deng Z, Ding Y, Yang F, Ding Y, Niu X. Metachronous multicentric giant cell tumor of bone with retroperitoneal metastasis. Chinese Medical Journal. 127: 2713-5. PMID 25043095  0.64
2014 Deng Z, Oses-Prieto JA, Kutschera U, Tseng TS, Hao L, Burlingame AL, Wang ZY, Briggs WR. Blue light-induced proteomic changes in etiolated Arabidopsis seedlings. Journal of Proteome Research. 13: 2524-33. PMID 24712693 DOI: 10.1021/Pr500010Z  0.48
2013 Wang Z, Liao H, Deng Z, Yang P, Du N, Zhanng Y, Ren H. miRNA-205 affects infiltration and metastasis of breast cancer. Biochemical and Biophysical Research Communications. 441: 139-43. PMID 24129185 DOI: 10.1016/j.bbrc.2013.10.025  0.44
2013 Wang C, Shang JX, Chen QX, Oses-Prieto JA, Bai MY, Yang Y, Yuan M, Zhang YL, Mu CC, Deng Z, Wei CQ, Burlingame AL, Wang ZY, Sun Y. Identification of BZR1-interacting proteins as potential components of the brassinosteroid signaling pathway in Arabidopsis through tandem affinity purification. Molecular & Cellular Proteomics : McP. 12: 3653-65. PMID 24019147 DOI: 10.1074/Mcp.M113.029256  1
2013 Chen P, Deng Z, Wang T, Chen L, Li J, Feng Y, Zhang S, Nin Y, Liu D, Chen Y, Ou X, Wen F. The potential interaction of MARCKS-related peptide and diltiazem on acrolein-induced airway mucus hypersecretion in rats. International Immunopharmacology. 17: 625-32. PMID 24012931 DOI: 10.1016/j.intimp.2013.08.001  0.32
2012 Deng Z, Bu S, Wang ZY. Quantitative analysis of protein phosphorylation using two-dimensional difference gel electrophoresis. Methods in Molecular Biology (Clifton, N.J.). 876: 47-66. PMID 22576085 DOI: 10.1007/978-1-61779-809-2_4  0.48
2011 Yu H, Yuan M, Lu W, Yang J, Dai S, Li Q, Yang Z, Dong J, Sun L, Deng Z, Zhang W, Chen M, Ping S, Han Y, Zhan Y, et al. Complete genome sequence of the nitrogen-fixing and rhizosphere-associated bacterium Pseudomonas stutzeri strain DSM4166. Journal of Bacteriology. 193: 3422-3. PMID 21515765 DOI: 10.1128/JB.05039-11  0.48
2011 Tang W, Yuan M, Wang R, Yang Y, Wang C, Oses-Prieto JA, Kim TW, Zhou HW, Deng Z, Gampala SS, Gendron JM, Jonassen EM, Lillo C, DeLong A, Burlingame AL, et al. PP2A activates brassinosteroid-responsive gene expression and plant growth by dephosphorylating BZR1. Nature Cell Biology. 13: 124-31. PMID 21258370 DOI: 10.1038/Ncb2151  0.48
2011 Li T, Xu SL, Oses-Prieto JA, Putil S, Xu P, Wang RJ, Li KH, Maltby DA, An LH, Burlingame AL, Deng ZP, Wang ZY. Proteomics analysis reveals post-translational mechanisms for cold-induced metabolic changes in Arabidopsis. Molecular Plant. 4: 361-74. PMID 21242321 DOI: 10.1093/Mp/Ssq078  1
2011 Liu YY, Zeng XA, Deng Z, Yu SJ, Yamasaki S. Effect of pulsed electric field on the secondary structure and thermal properties of soy protein isolate European Food Research and Technology. 233: 841-850. DOI: 10.1007/S00217-011-1580-Z  0.32
2010 Wang F, Bai MY, Deng Z, Oses-Prieto JA, Burlingame AL, Lu T, Chong K, Wang ZY. Proteomic study identifies proteins involved in brassinosteroid regulation of rice growth. Journal of Integrative Plant Biology. 52: 1075-85. PMID 21106006 DOI: 10.1111/J.1744-7909.2010.00992.X  1
2010 Tang W, Deng Z, Wang ZY. Proteomics shed light on the brassinosteroid signaling mechanisms. Current Opinion in Plant Biology. 13: 27-33. PMID 20004136 DOI: 10.1016/J.Pbi.2009.10.007  1
2009 Kim TW, Guan S, Sun Y, Deng Z, Tang W, Shang JX, Sun Y, Burlingame AL, Wang ZY. Brassinosteroid signal transduction from cell-surface receptor kinases to nuclear transcription factors. Nature Cell Biology. 11: 1254-60. PMID 19734888 DOI: 10.1038/Ncb1970  1
2008 Gu Y, Deng Z, Paredez AR, DeBolt S, Wang ZY, Somerville C. Prefoldin 6 is required for normal microtubule dynamics and organization in Arabidopsis Proceedings of the National Academy of Sciences of the United States of America. 105: 18064-18069. PMID 19004800 DOI: 10.1073/Pnas.0808652105  0.48
2008 Tang W, Kim TW, Oses-Prieto JA, Sun Y, Deng Z, Zhu S, Wang R, Burlingame AL, Wang ZY. BSKs mediate signal transduction from the receptor kinase BRI1 in Arabidopsis. Science (New York, N.Y.). 321: 557-60. PMID 18653891 DOI: 10.1126/Science.1156973  1
2008 Tang W, Deng Z, Oses-Prieto JA, Suzuki N, Zhu S, Zhang X, Burlingame AL, Wang ZY. Proteomics studies of brassinosteroid signal transduction using prefractionation and two-dimensional DIGE. Molecular & Cellular Proteomics : McP. 7: 728-38. PMID 18182375 DOI: 10.1074/Mcp.M700358-Mcp200  1
2007 Deng Z, Zhang X, Tang W, Oses-Prieto JA, Suzuki N, Gendron JM, Chen H, Guan S, Chalkley RJ, Peterman TK, Burlingame AL, Wang ZY. A proteomics study of brassinosteroid response in Arabidopsis. Molecular & Cellular Proteomics : McP. 6: 2058-71. PMID 17848588 DOI: 10.1074/Mcp.M700123-Mcp200  1
2007 Gampala SS, Kim TW, He JX, Tang W, Deng Z, Bai MY, Guan S, Lalonde S, Sun Y, Gendron JM, Chen H, Shibagaki N, Ferl RJ, Ehrhardt D, Chong K, et al. An essential role for 14-3-3 proteins in brassinosteroid signal transduction in Arabidopsis. Developmental Cell. 13: 177-89. PMID 17681130 DOI: 10.1016/J.Devcel.2007.06.009  1
2003 Ramakrishna W, Deng Z, Ding CK, Handa AK, Ozminkowski RH. A novel small heat shock protein gene, vis1, contributes to pectin depolymerization and juice viscosity in tomato fruit. Plant Physiology. 131: 725-35. PMID 12586896 DOI: 10.1104/Pp.012401  0.64
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