☰

Jared Sampson - Publications

Affiliations: 
Columbia University, New York, NY 
Area:
Biochemistry, Structural Biology, Computational Chemistry
Tree Info Similar researchers PubMed Report error

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Sergeeva AP, Katsamba PS, Liao J, Sampson JM, Bahna F, Mannepalli S, Morano NC, Shapiro L, Friesner RA, Honig B. Free Energy Perturbation Calculations of Mutation Effects on SARS-CoV-2 RBD::ACE2 Binding Affinity. Journal of Molecular Biology. 435: 168187. PMID 37355034 DOI: 10.1016/j.jmb.2023.168187  0.678
2020 Zhou T, Tsybovsky Y, Gorman J, Rapp M, Cerutti G, Chuang GY, Katsamba PS, Sampson JM, Schön A, Bimela J, Boyington JC, Nazzari A, Olia AS, Shi W, Sastry M, et al. Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains. Cell Host & Microbe. PMID 33271067 DOI: 10.1016/j.chom.2020.11.004  0.61
2020 Zhou T, Tsybovsky Y, Olia AS, Gorman J, Rapp MA, Cerutti G, Katsamba PS, Nazzari A, Schon A, Wang PD, Bimela J, Shi W, Teng IT, Zhang B, Boyington JC, ... ... Sampson JM, et al. A pH-dependent switch mediates conformational masking of SARS-CoV-2 spike. Biorxiv : the Preprint Server For Biology. PMID 32637958 DOI: 10.1101/2020.07.04.187989  0.61
2016 Piccinelli AC, Morato PN, Dos Santos Barbosa M, Croda J, Sampson J, Kong X, Konkiewitza EC, Ziff EB, Amaya-Farfan J, Kassuya CA. Limonene reduces hyperalgesia induced by gp120 and cytokines by modulation of IL-1 β and protein expression in spinal cord of mice. Life Sciences. PMID 27888114 DOI: 10.1016/J.Lfs.2016.11.017  0.459
2016 Jiang X, Totrov M, Li W, Sampson JM, Williams C, Lu H, Wu X, Lu S, Wang S, Zolla-Pazner S, Kong XP. Rationally Designed Immunogens Targeting HIV-1 gp120 V1V2 Induce Distinct Conformation-Specific Antibody Responses in Rabbits. Journal of Virology. PMID 27707920 DOI: 10.1128/Jvi.01409-16  0.549
2015 Killikelly A, Benson MA, Ohneck EA, Sampson JM, Jakoncic J, Spurrier B, Torres VJ, Kong XP. Structure-based functional characterization of repressor of toxin (Rot), a central regulator of Staphylococcus aureus virulence. Journal of Bacteriology. 197: 188-200. PMID 25331435 DOI: 10.1128/Jb.02317-14  0.494
2014 Spurrier B, Sampson J, Gorny MK, Zolla-Pazner S, Kong XP. Functional implications of the binding mode of a human conformation-dependent V2 monoclonal antibody against HIV. Journal of Virology. 88: 4100-12. PMID 24478429 DOI: 10.1128/Jvi.03153-13  0.612
2013 Pan R, Sampson JM, Chen Y, Vaine M, Wang S, Lu S, Kong XP. Rabbit anti-HIV-1 monoclonal antibodies raised by immunization can mimic the antigen-binding modes of antibodies derived from HIV-1-infected humans. Journal of Virology. 87: 10221-31. PMID 23864637 DOI: 10.1128/Jvi.00843-13  0.523
2012 Chiu YN, Sampson JM, Jiang X, Zolla-Pazner SB, Kong XP. Skin tattooing as a novel approach for DNA vaccine delivery. Journal of Visualized Experiments : Jove. PMID 23117298 DOI: 10.3791/50032  0.4
2012 Rodkey EA, Drawz SM, Sampson JM, Bethel CR, Bonomo RA, van den Akker F. Crystal structure of a preacylation complex of the β-lactamase inhibitor sulbactam bound to a sulfenamide bond-containing thiol-β-lactamase. Journal of the American Chemical Society. 134: 16798-804. PMID 22974281 DOI: 10.1021/ja3073676  0.62
2012 Ke W, Rodkey EA, Sampson JM, Skalweit MJ, Sheri A, Pagadala SR, Nottingham MD, Buynak JD, Bonomo RA, van den Akker F. The importance of the trans-enamine intermediate as a β-lactamase inhibition strategy probed in inhibitor-resistant SHV β-lactamase variants. Chemmedchem. 7: 1002-8. PMID 22438274 DOI: 10.1002/Cmdc.201200006  0.621
2012 Gorny MK, Pan R, Williams C, Wang XH, Volsky B, O'Neal T, Spurrier B, Sampson JM, Li L, Seaman MS, Kong XP, Zolla-Pazner S. Functional and immunochemical cross-reactivity of V2-specific monoclonal antibodies from HIV-1-infected individuals. Virology. 427: 198-207. PMID 22402248 DOI: 10.1016/J.Virol.2012.02.003  0.54
2012 Sampson J, Killikelly A, Zhang H, Gorny M, Zolla-Pazner S, Kong X. High-resolution crystal structure of the Fv of quaternary neutralizing epitope mAb 2909 reveals atomic details of its antigen-binding site Retrovirology. 9: 79. DOI: 10.1186/1742-4690-9-S2-P79  0.577
2012 Pan R, Sampson J, Chen Y, Vaine M, Wang S, Lu S, Kong X. Structural analyses of antigen binding similarities and differences between rabbit and human anti-gp120 V3 mAbs. Retrovirology. 9: 76. DOI: 10.1186/1742-4690-9-S2-P76  0.591
2012 Spurrier B, Pan R, Sampson J, Williams C, Gorny M, Zolla-Pazner S, Kong X. Crystal structure analysis of anti-V2 mAb 2158 suggests a conformational epitope involving an N-linked glycan Retrovirology. 9: 70. DOI: 10.1186/1742-4690-9-S2-P70  0.574
2011 Gorny MK, Sampson J, Li H, Jiang X, Totrov M, Wang XH, Williams C, O'Neal T, Volsky B, Li L, Cardozo T, Nyambi P, Zolla-Pazner S, Kong XP. Human anti-V3 HIV-1 monoclonal antibodies encoded by the VH5-51/VL lambda genes define a conserved antigenic structure. Plos One. 6: e27780. PMID 22164215 DOI: 10.1371/Journal.Pone.0027780  0.588
2011 Spurrier B, Sampson JM, Totrov M, Li H, O'Neal T, Williams C, Robinson J, Gorny MK, Zolla-Pazner S, Kong XP. Structural analysis of human and macaque mAbs 2909 and 2.5B: implications for the configuration of the quaternary neutralizing epitope of HIV-1 gp120. Structure (London, England : 1993). 19: 691-9. PMID 21565703 DOI: 10.1016/J.Str.2011.02.012  0.554
2011 Sampson JM, Ke W, Bethel CR, Pagadala SR, Nottingham MD, Bonomo RA, Buynak JD, van den Akker F. Ligand-dependent disorder of the Omega loop observed in extended-spectrum SHV-type beta-lactamase. Antimicrobial Agents and Chemotherapy. 55: 2303-9. PMID 21357298 DOI: 10.1128/Aac.01360-10  0.617
2011 Ke W, Sampson JM, Ori C, Prati F, Drawz SM, Bethel CR, Bonomo RA, van den Akker F. Novel insights into the mode of inhibition of class A SHV-1 beta-lactamases revealed by boronic acid transition state inhibitors. Antimicrobial Agents and Chemotherapy. 55: 174-83. PMID 21041505 DOI: 10.1128/Aac.00930-10  0.624
2011 Rodkey EA, Sampson JM, Kalp M, Bethel CR, Buynak JD, Carey PR, Bonomo RA, van F, Akker d. β-Lactamase Inhibition: Mechanistic Details and Novel Inhibitors Biophysical Journal. 100: 552a. DOI: 10.1016/J.Bpj.2010.12.3212  0.315
2010 Bou G, Santillana E, Sheri A, Beceiro A, Sampson JM, Kalp M, Bethel CR, Distler AM, Drawz SM, Pagadala SR, van den Akker F, Bonomo RA, Romero A, Buynak JD. Design, synthesis, and crystal structures of 6-alkylidene-2'-substituted penicillanic acid sulfones as potent inhibitors of Acinetobacter baumannii OXA-24 carbapenemase. Journal of the American Chemical Society. 132: 13320-31. PMID 20822105 DOI: 10.1021/Ja104092Z  0.591
2009 Jiang X, Totrov M, Sampson J, Williams C, Gorny M, Zollla-Pazner S, Kong X. P04-42. Molecular design of a mimotope that preserves conserved structural elements of the HIV-1 V3 crown Retrovirology. 6: 70. DOI: 10.1186/1742-4690-6-S3-P70  0.498
Show low-probability matches.