Anurag Verma - Publications

Affiliations: 
Penn State Geisinger Medical Center, Hershey, PA, United States 

82 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Woerner J, Sriram V, Nam Y, Verma A, Kim D. Uncovering genetic associations in the human diseasome using an endophenotype-augmented disease network. Bioinformatics (Oxford, England). 40. PMID 38527901 DOI: 10.1093/bioinformatics/btae126  0.321
2024 Lo Faro V, Bhattacharya A, Zhou W, Zhou D, Wang Y, Läll K, Kanai M, Lopera-Maya E, Straub P, Pawar P, Tao R, Zhong X, Namba S, Sanna S, Nolte IM, ... ... Verma A, et al. Novel ancestry-specific primary open-angle glaucoma loci and shared biology with vascular mechanisms and cell proliferation. Cell Reports. Medicine. 5: 101430. PMID 38382466 DOI: 10.1016/j.xcrm.2024.101430  0.643
2023 Kember RL, Verma SS, Verma A, Xiao B, Lucas A, Kripke CM, Judy R, Chen J, Damrauer SM, Rader DJ, Ritchie MD. Polygenic risk scores for cardiometabolic traits demonstrate importance of ancestry for predictive precision medicine. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 29: 611-626. PMID 38160310  0.722
2023 Verma A, Huffman JE, Rodriguez A, Conery M, Liu M, Ho YL, Kim Y, Heise DA, Guare L, Panickan VA, Garcon H, Linares F, Costa L, Goethert I, Tipton R, et al. Diversity and Scale: Genetic Architecture of 2,068 Traits in the VA Million Veteran Program. Medrxiv : the Preprint Server For Health Sciences. PMID 37425708 DOI: 10.1101/2023.06.28.23291975  0.361
2023 Nam Y, Lucas A, Yun JS, Lee SM, Park JW, Chen Z, Lee B, Ning X, Shen L, Verma A, Kim D. Development of complemented comprehensive networks for rapid screening of repurposable drugs applicable to new emerging disease outbreaks. Journal of Translational Medicine. 21: 415. PMID 37365631 DOI: 10.1186/s12967-023-04223-2  0.542
2023 Singhal P, Guare L, Morse C, Lucas A, Byrska-Bishop M, Guerraty MA, Kim D, Ritchie MD, Verma A. DETECT: Feature extraction method for disease trajectory modeling in electronic health records. Amia Joint Summits On Translational Science Proceedings. Amia Joint Summits On Translational Science. 2023: 487-496. PMID 37350926  0.78
2023 Woerner J, Sriram V, Nam Y, Verma A, Kim D. Uncovering genetic associations in the human diseasome using an endophenotype-augmented disease network. Medrxiv : the Preprint Server For Health Sciences. PMID 37293013 DOI: 10.1101/2023.05.11.23289852  0.635
2023 Zaidi AA, Verma A, Morse C, Ritchie MD, Mathieson I. The genetic and phenotypic correlates of mtDNA copy number in a multi-ancestry cohort. Hgg Advances. 4: 100202. PMID 37255673 DOI: 10.1016/j.xhgg.2023.100202  0.559
2023 Graham SE, Clarke SL, Wu KH, Kanoni S, Zajac GJM, Ramdas S, Surakka I, Ntalla I, Vedantam S, Winkler TW, Locke AE, Marouli E, Hwang MY, Han S, Narita A, ... ... Verma A, et al. Author Correction: The power of genetic diversity in genome-wide association studies of lipids. Nature. PMID 37237109 DOI: 10.1038/s41586-023-06194-2  0.775
2022 Zhou W, Kanai M, Wu KH, Rasheed H, Tsuo K, Hirbo JB, Wang Y, Bhattacharya A, Zhao H, Namba S, Surakka I, Wolford BN, Lo Faro V, Lopera-Maya EA, Läll K, ... ... Verma A, et al. Global Biobank Meta-analysis Initiative: Powering genetic discovery across human disease. Cell Genomics. 2: 100192. PMID 36777996 DOI: 10.1016/j.xgen.2022.100192  0.583
2022 Kanoni S, Graham SE, Wang Y, Surakka I, Ramdas S, Zhu X, Clarke SL, Bhatti KF, Vedantam S, Winkler TW, Locke AE, Marouli E, Zajac GJM, Wu KH, Ntalla I, ... ... Verma A, et al. Implicating genes, pleiotropy, and sexual dimorphism at blood lipid loci through multi-ancestry meta-analysis. Genome Biology. 23: 268. PMID 36575460 DOI: 10.1186/s13059-022-02837-1  0.699
2022 Nam Y, Jung SH, Yun JS, Sriram V, Singhal P, Byrska-Bishop M, Verma A, Shin H, Park WY, Won HH, Kim D. Discovering comorbid diseases using an inter-disease interactivity network based on biobank-scale PheWAS data. Bioinformatics (Oxford, England). PMID 36571484 DOI: 10.1093/bioinformatics/btac822  0.791
2022 Verma A, Damrauer SM, Naseer N, Weaver J, Kripke CM, Guare L, Sirugo G, Kember RL, Drivas TG, Dudek SM, Bradford Y, Lucas A, Judy R, Verma SS, Meagher E, et al. The Penn Medicine BioBank: Towards a Genomics-Enabled Learning Healthcare System to Accelerate Precision Medicine in a Diverse Population. Journal of Personalized Medicine. 12. PMID 36556195 DOI: 10.3390/jpm12121974  0.708
2022 Park J, MacLean MT, Lucas AM, Torigian DA, Schneider CV, Cherlin T, Xiao B, Miller JE, Bradford Y, Judy RL, Verma A, Damrauer SM, Ritchie MD, Witschey WR, Rader DJ. Exome-wide association analysis of CT imaging-derived hepatic fat in a medical biobank. Cell Reports. Medicine. 100855. PMID 36513072 DOI: 10.1016/j.xcrm.2022.100855  0.703
2022 Verma SS, Keat K, Li B, Hoffecker G, Risman M, Sangkuhl K, Whirl-Carrillo M, Dudek S, Verma A, Klein TE, Ritchie MD, Tuteja S. Evaluating the frequency and the impact of pharmacogenetic alleles in an ancestrally diverse Biobank population. Journal of Translational Medicine. 20: 550. PMID 36443877 DOI: 10.1186/s12967-022-03745-5  0.788
2022 Li B, Sangkuhl K, Keat K, Whaley RM, Woon M, Verma S, Dudek S, Tuteja S, Verma A, Whirl-Carrillo M, Ritchie MD, Klein TE. How to Run the Pharmacogenomics Clinical Annotation Tool (PharmCAT). Clinical Pharmacology and Therapeutics. PMID 36350094 DOI: 10.1002/cpt.2790  0.798
2022 Butler-Laporte G, Povysil G, Kosmicki JA, Cirulli ET, Drivas T, Furini S, Saad C, Schmidt A, Olszewski P, Korotko U, Quinodoz M, Çelik E, Kundu K, Walter K, Jung J, ... ... Verma A, et al. Exome-wide association study to identify rare variants influencing COVID-19 outcomes: Results from the Host Genetics Initiative. Plos Genetics. 18: e1010367. PMID 36327219 DOI: 10.1371/journal.pgen.1010367  0.348
2022 Ramdas S, Judd J, Graham SE, Kanoni S, Wang Y, Surakka I, Wenz B, Clarke SL, Chesi A, Wells A, Bhatti KF, Vedantam S, Winkler TW, Locke AE, Marouli E, ... ... Verma A, et al. A multi-layer functional genomic analysis to understand noncoding genetic variation in lipids. American Journal of Human Genetics. 109: 1366-1387. PMID 35931049 DOI: 10.1016/j.ajhg.2022.06.012  0.713
2022 Banday AR, Stanifer ML, Florez-Vargas O, Onabajo OO, Papenberg BW, Zahoor MA, Mirabello L, Ring TJ, Lee CH, Albert PS, Andreakos E, Arons E, Barsh G, Biesecker LG, Boyle DL, ... ... Verma A, et al. Genetic regulation of OAS1 nonsense-mediated decay underlies association with COVID-19 hospitalization in patients of European and African ancestries. Nature Genetics. PMID 35835913 DOI: 10.1038/s41588-022-01113-z  0.526
2022 Choe EK, Shivakumar M, Lee SM, Verma A, Kim D. Dissecting the clinical relevance of polygenic risk score for obesity-a cross-sectional, longitudinal analysis. International Journal of Obesity (2005). PMID 35752651 DOI: 10.1038/s41366-022-01168-2  0.494
2022 Zhang X, Lucas AM, Veturi Y, Drivas TG, Bone WP, Verma A, Chung WK, Crosslin D, Denny JC, Hebbring S, Jarvik GP, Kullo I, Larson EB, Rasmussen-Torvik LJ, Schaid DJ, et al. Large-scale genomic analyses reveal insights into pleiotropy across circulatory system diseases and nervous system disorders. Nature Communications. 13: 3428. PMID 35701404 DOI: 10.1038/s41467-022-30678-w  0.648
2022 Vujkovic M, Ramdas S, Lorenz KM, Guo X, Darlay R, Cordell HJ, He J, Gindin Y, Chung C, Myers RP, Schneider CV, Park J, Lee KM, Serper M, Carr RM, ... ... Verma A, et al. A multiancestry genome-wide association study of unexplained chronic ALT elevation as a proxy for nonalcoholic fatty liver disease with histological and radiological validation. Nature Genetics. PMID 35654975 DOI: 10.1038/s41588-022-01078-z  0.563
2022 Zhang C, Verma A, Feng Y, Melo MCR, McQuillan M, Hansen M, Lucas A, Park J, Ranciaro A, Thompson S, Rubel MA, Campbell MC, Beggs W, Hirbo J, Wata Mpoloka S, et al. Impact of natural selection on global patterns of genetic variation and association with clinical phenotypes at genes involved in SARS-CoV-2 infection. Proceedings of the National Academy of Sciences of the United States of America. 119: e2123000119. PMID 35580180 DOI: 10.1073/pnas.2123000119  0.523
2022 Verma A, Tsao NL, Thomann LO, Ho YL, Iyengar SK, Luoh SW, Carr R, Crawford DC, Efird JT, Huffman JE, Hung A, Ivey KL, Levin MG, Lynch J, Natarajan P, et al. A Phenome-Wide Association Study of genes associated with COVID-19 severity reveals shared genetics with complex diseases in the Million Veteran Program. Plos Genetics. 18: e1010113. PMID 35482673 DOI: 10.1371/journal.pgen.1010113  0.563
2022 Chand GB, Singhal P, Dwyer DB, Wen J, Erus G, Doshi J, Srinivasan D, Mamourian E, Varol E, Sotiras A, Hwang G, Dazzan P, Kahn RS, Schnack HG, Zanetti MV, ... ... Verma A, et al. Schizophrenia Imaging Signatures and Their Associations With Cognition, Psychopathology, and Genetics in the General Population. The American Journal of Psychiatry. appiajp21070686. PMID 35410495 DOI: 10.1176/appi.ajp.21070686  0.397
2022 Kousathanas A, Pairo-Castineira E, Rawlik K, Stuckey A, Odhams CA, Walker S, Russell CD, Malinauskas T, Wu Y, Millar J, Shen X, Elliott KS, Griffiths F, Oosthuyzen W, Morrice K, ... ... Verma A, et al. Whole genome sequencing reveals host factors underlying critical Covid-19. Nature. PMID 35255492 DOI: 10.1038/s41586-022-04576-6  0.519
2022 Horowitz JE, Kosmicki JA, Damask A, Sharma D, Roberts GHL, Justice AE, Banerjee N, Coignet MV, Yadav A, Leader JB, Marcketta A, Park DS, Lanche R, Maxwell E, Knight SC, ... ... Verma A, et al. Genome-wide analysis provides genetic evidence that ACE2 influences COVID-19 risk and yields risk scores associated with severe disease. Nature Genetics. PMID 35241825 DOI: 10.1038/s41588-021-01006-7  0.533
2022 Sriram V, Shivakumar M, Jung SH, Nam Y, Bang L, Verma A, Lee S, Choe EK, Kim D. NETMAGE: A human disease phenotype map generator for the network-based visualization of phenome-wide association study results. Gigascience. 11. PMID 35166337 DOI: 10.1093/gigascience/giac002  0.626
2022 Choe EK, Shivakumar M, Verma A, Verma SS, Choi SH, Kim JS, Kim D. Leveraging deep phenotyping from health check-up cohort with 10,000 Korean individuals for phenome-wide association study of 136 traits. Scientific Reports. 12: 1930. PMID 35121771 DOI: 10.1038/s41598-021-04580-2  0.757
2022 Nam Y, Jung SH, Verma A, Sriram V, Won HH, Yun JS, Kim D. netCRS: Network-based comorbidity risk score for prediction of myocardial infarction using biobank-scaled PheWAS data. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 27: 325-336. PMID 34890160  0.599
2021 Sriram V, Nam Y, Shivakumar M, Verma A, Jung SH, Lee SM, Kim D. A Network-Based Analysis of Disease Complication Associations for Obstetric Disorders in the UK Biobank. Journal of Personalized Medicine. 11. PMID 34945853 DOI: 10.3390/jpm11121382  0.575
2021 Wang L, Desai H, Verma SS, Le A, Hausler R, Verma A, Judy R, Doucette A, Gabriel PE, Nathanson KL, Damrauer SM, Mowery DL, Ritchie MD, Kember RL, et al. Performance of polygenic risk scores for cancer prediction in a racially diverse academic biobank. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 34906489 DOI: 10.1016/j.gim.2021.10.015  0.679
2021 Graham SE, Clarke SL, Wu KH, Kanoni S, Zajac GJM, Ramdas S, Surakka I, Ntalla I, Vedantam S, Winkler TW, Locke AE, Marouli E, Hwang MY, Han S, Narita A, ... ... Verma A, et al. The power of genetic diversity in genome-wide association studies of lipids. Nature. PMID 34887591 DOI: 10.1038/s41586-021-04064-3  0.8
2021 Verma A, Tsao NL, Thomann L, Ho YL, Iyengar SK, Luoh SW, Carr R, Crawford D, Efird JT, Huffman J, Hung A, Ivey KL, Levin M, Lynch J, Natarajan P, et al. A Phenome-Wide Association Study of genes associated with COVID-19 severity reveals shared genetics with complex diseases in the Million Veteran Program. Medrxiv : the Preprint Server For Health Sciences. PMID 34642702 DOI: 10.1101/2021.05.18.21257396  0.565
2021 Liu X, Verma A, Garcia G, Ramage H, Lucas A, Myers RL, Michaelson JJ, Coryell W, Kumar A, Charney AW, Kazanietz MG, Rader DJ, Ritchie MD, Berrettini WH, Schultz DC, et al. Targeting the coronavirus nucleocapsid protein through GSK-3 inhibition. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34593624 DOI: 10.1073/pnas.2113401118  0.371
2021 Zhang C, Verma A, Feng Y, Melo MCDR, McQuillan M, Hansen M, Lucas A, Park J, Ranciaro A, Thompson S, Rubel M, Campbell M, Beggs W, Hirbo J, Mpoloka SW, et al. Impact of natural selection on global patterns of genetic variation, and association with clinical phenotypes, at genes involved in SARS-CoV-2 infection. Research Square. PMID 34341784 DOI: 10.21203/rs.3.rs-673011/v1  0.544
2021 Banday AR, Stanifer ML, Florez-Vargas O, Onabajo OO, Zahoor MA, Papenberg BW, Ring TJ, Lee CH, Andreakos E, Arons E, Barsh G, Biesecker LG, Boyle DL, Burnett-Hartman A, Carrington M, ... ... Verma A, et al. Genetic regulation of nonsense-mediated decay underlies association with risk of severe COVID-19. Medrxiv : the Preprint Server For Health Sciences. PMID 34282422 DOI: 10.1101/2021.07.09.21260221  0.533
2021 Zhang C, Verma A, Feng Y, Melo MCR, McQuillan M, Hansen M, Lucas A, Park J, Ranciaro A, Thompson S, Rubel MA, Campbell MC, Beggs W, Hirbo J, Mpoloka SW, et al. Global patterns of genetic variation and association with clinical phenotypes at genes involved in SARS-CoV-2 infection. Medrxiv : the Preprint Server For Health Sciences. PMID 34230933 DOI: 10.1101/2021.06.28.21259529  0.541
2021 Veturi Y, Lucas A, Bradford Y, Hui D, Dudek S, Theusch E, Verma A, Miller JE, Kullo I, Hakonarson H, Sleiman P, Schaid D, Stein CM, Edwards DRV, Feng Q, et al. A unified framework identifies new links between plasma lipids and diseases from electronic medical records across large-scale cohorts. Nature Genetics. PMID 34140684 DOI: 10.1038/s41588-021-00879-y  0.716
2021 Sun L, Surya S, Goodman NG, Le AN, Kelly G, Owoyemi O, Desai H, Zheng C, DeLuca S, Good ML, Hussain J, Jeffries SD, Kry YR, Kugler EM, Mansour M, ... ... Verma A, et al. SARS-CoV-2 Seropositivity and Seroconversion in Patients Undergoing Active Cancer-Directed Therapy. Jco Oncology Practice. OP2100113. PMID 34133219 DOI: 10.1200/OP.21.00113  0.606
2021 Kosmicki JA, Horowitz JE, Banerjee N, Lanche R, Marcketta A, Maxwell E, Bai X, Sun D, Backman JD, Sharma D, Kury FSP, Kang HM, O'Dushlaine C, Yadav A, Mansfield AJ, ... ... Verma A, et al. Pan-ancestry exome-wide association analyses of COVID-19 outcomes in 586,157 individuals. American Journal of Human Genetics. PMID 34115965 DOI: 10.1016/j.ajhg.2021.05.017  0.579
2021 Li B, Veturi Y, Verma A, Bradford Y, Daar ES, Gulick RM, Riddler SA, Robbins GK, Lennox JL, Haas DW, Ritchie MD. Tissue specificity-aware TWAS (TSA-TWAS) framework identifies novel associations with metabolic, immunologic, and virologic traits in HIV-positive adults. Plos Genetics. 17: e1009464. PMID 33901188 DOI: 10.1371/journal.pgen.1009464  0.789
2021 Beaulieu-Jones B, Darabos C, Kim D, Verma A, Kobren SN. Innovative methodological approaches for data integration to derive patterns across diverse, large-scale biomedical datasets. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 26: 256-260. PMID 33691022  0.506
2021 Liu X, Verma A, Ramage H, Garcia G, Myers RL, Lucas A, Michaelson JJ, Coryell W, Kumar A, Charney A, Kazanietz MG, Rader DJ, Ritchie MD, Berrettini WH, Damoiseaux R, et al. Targeting the Coronavirus Nucleocapsid Protein through GSK-3 Inhibition. Medrxiv : the Preprint Server For Health Sciences. PMID 33655282 DOI: 10.1101/2021.02.17.21251933  0.373
2021 Sun L, Surya S, Le AN, Desai H, Doucette A, Gabriel P, Ritchie MD, Rader D, Maillard I, Bange E, Huang AC, Vonderheide RH, DeMichele A, Verma A, Mamtani R, et al. Rates of COVID-19-Related Outcomes in Cancer Compared With Noncancer Patients. Jnci Cancer Spectrum. 5: pkaa120. PMID 33554040 DOI: 10.1093/jncics/pkaa120  0.386
2021 Sun L, Surya S, Goodman NG, Le AN, Kelly G, Owoyemi O, Desai H, Zheng C, DeLuca S, Good ML, Hussain J, Jeffries SD, Kry YR, Kugler EM, Mansour M, ... ... Verma A, et al. SARS-CoV-2 seropositivity and seroconversion in patients undergoing active cancer-directed therapy. Medrxiv : the Preprint Server For Health Sciences. PMID 33469597 DOI: 10.1101/2021.01.15.21249810  0.617
2021 Park J, Lucas AM, Zhang X, Chaudhary K, Cho JH, Nadkarni G, Dobbyn A, Chittoor G, Josyula NS, Katz N, Breeyear JH, Ahmadmehrabi S, Drivas TG, Chavali VRM, Fasolino M, ... ... Verma A, et al. Exome-wide evaluation of rare coding variants using electronic health records identifies new gene-phenotype associations. Nature Medicine. PMID 33432171 DOI: 10.1038/s41591-020-1133-8  0.752
2020 Kember RL, Merikangas AK, Verma SS, Verma A, Judy R, Damrauer SM, Ritchie MD, Rader DJ, Bućan M. Polygenic Risk of Psychiatric Disorders Exhibits Cross-trait Associations in Electronic Health Record Data From European Ancestry Individuals. Biological Psychiatry. PMID 32919613 DOI: 10.1016/J.Biopsych.2020.06.026  0.672
2020 Sun L, Sanjna S, Le A, Desai H, Doucette A, Gabriel P, Ritchie M, Rader D, Maillard I, Bange E, Huang A, Vonderheide RH, DeMichele A, Verma A, Mamtani R, et al. Rates of COVID-19-related Outcomes in Cancer compared to non-Cancer Patients. Medrxiv : the Preprint Server For Health Sciences. PMID 32817956 DOI: 10.1101/2020.08.14.20174961  0.372
2020 Kobren SN, Beaulieu-Jones B, Darabos C, Kim D, Verma A. Ongoing challenges and innovative approaches for recognizing patterns across large-scale, integrative biomedical datasets. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 25: 286-294. PMID 31797604  0.509
2019 Sangkuhl K, Whirl-Carrillo M, Whaley RM, Woon M, Lavertu A, Altman RB, Carter L, Verma A, Ritchie MD, Klein TE. Pharmacogenomics Clinical Annotation Tool (PharmCAT). Clinical Pharmacology and Therapeutics. PMID 31306493 DOI: 10.1002/Cpt.1568  0.508
2019 Haggerty CM, Damrauer SM, Levin MG, Birtwell D, Carey DJ, Golden AM, Hartzel DN, Hu Y, Judy R, Kelly MA, Kember RL, Kirchner HL, Leader JB, Liang L, McDermott-Roe C, ... ... Verma A, et al. Genomics-First Evaluation of Heart Disease Associated With Titin-Truncating Variants. Circulation. PMID 31216868 DOI: 10.1161/Circulationaha.119.039573  0.624
2019 Li B, Veturi Y, Bradford Y, Verma SS, Verma A, Lucas AM, Haas DW, Ritchie MD. Influence of tissue context on gene prioritization for predicted transcriptome-wide association studies. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 24: 296-307. PMID 30864331  0.795
2019 Zhang X, Veturi Y, Verma S, Bone W, Verma A, Lucas A, Hebbring S, Denny JC, Stanaway IB, Jarvik GP, Crosslin D, Larson EB, Rasmussen-Torvik L, Pendergrass SA, Smoller JW, et al. Detecting potential pleiotropy across cardiovascular and neurological diseases using univariate, bivariate, and multivariate methods on 43,870 individuals from the eMERGE network. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 24: 272-283. PMID 30864329  0.82
2019 Verma SS, Verma A, Kim D, Darabos C. Session Introduction - Pattern Recognition in Biomedical Data: Challenges in putting big data to work. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 24: 1-7. PMID 30864305  0.675
2019 Kember R, Verma S, Verma A, Ritchie M, Damrauer S, Rader D, Merikangas A. USING ELECTRONIC HEALTH RECORDS TO IDENTIFY MEDICAL COMORBIDITIES OF MOOD DISORDERS European Neuropsychopharmacology. 29: S13-S14. DOI: 10.1016/J.Euroneuro.2019.07.028  0.649
2018 Verma A, Bang L, Miller JE, Zhang Y, Lee MTM, Zhang Y, Byrska-Bishop M, Carey DJ, Ritchie MD, Pendergrass SA, Kim D. Human-Disease Phenotype Map Derived from PheWAS across 38,682 Individuals. American Journal of Human Genetics. PMID 30598166 DOI: 10.1016/J.Ajhg.2018.11.006  0.816
2018 Verma SS, Josyula N, Verma A, Zhang X, Veturi Y, Dewey FE, Hartzel DN, Lavage DR, Leader J, Ritchie MD, Pendergrass SA. Author Correction: Rare variants in drug target genes contributing to complex diseases, phenome-wide. Scientific Reports. 8: 15911. PMID 30353015 DOI: 10.1038/S41598-018-27936-7  0.772
2018 Haas DW, Bradford Y, Verma A, Verma SS, Eron JJ, Gulick RM, Riddler SA, Sax PE, Daar ES, Morse GD, Acosta EP, Ritchie MD. Brain neurotransmitter transporter/receptor genomics and efavirenz central nervous system adverse events. Pharmacogenetics and Genomics. PMID 29847509 DOI: 10.1097/Fpc.0000000000000341  0.643
2018 Verma A, Bradford Y, Dudek S, Lucas AM, Verma SS, Pendergrass SA, Ritchie MD. A simulation study investigating power estimates in phenome-wide association studies. Bmc Bioinformatics. 19: 120. PMID 29618318 DOI: 10.1186/S12859-018-2135-0  0.786
2018 Verma A, Lucas A, Verma SS, Zhang Y, Josyula N, Khan A, Hartzel DN, Lavage DR, Leader J, Ritchie MD, Pendergrass SA. PheWAS and Beyond: The Landscape of Associations with Medical Diagnoses and Clinical Measures across 38,662 Individuals from Geisinger. American Journal of Human Genetics. PMID 29606303 DOI: 10.1016/J.Ajhg.2018.02.017  0.816
2018 Verma SS, Josyula N, Verma A, Zhang X, Veturi Y, Dewey FE, Hartzel DN, Lavage DR, Leader J, Ritchie MD, Pendergrass SA. Rare variants in drug target genes contributing to complex diseases, phenome-wide. Scientific Reports. 8: 4624. PMID 29545597 DOI: 10.1038/S41598-018-22834-4  0.817
2018 Li B, Verma SS, Veturi YC, Verma A, Bradford Y, Haas DW, Ritchie MD. Evaluation of PrediXcan for prioritizing GWAS associations and predicting gene expression. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 23: 448-459. PMID 29218904  0.801
2018 Verma SS, Verma A, Basile AO, Bishop MB, Darabos C. Session Introduction: Challenges of Pattern Recognition in Biomedical Data. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 23: 104-110. PMID 29218873  0.778
2017 Verma A, Ritchie MD. Current Scope and Challenges in Phenome-Wide Association Studies. Current Epidemiology Reports. 4: 321-329. PMID 29545989 DOI: 10.1007/S40471-017-0127-7  0.624
2017 Hall MA, Wallace J, Lucas A, Kim D, Basile AO, Verma SS, McCarty CA, Brilliant MH, Peissig PL, Kitchner TE, Verma A, Pendergrass SA, Dudek SM, Moore JH, Ritchie MD. PLATO software provides analytic framework for investigating complexity beyond genome-wide association studies. Nature Communications. 8: 1167. PMID 29079728 DOI: 10.1038/S41467-017-00802-2  0.796
2017 Verma A, Bradford Y, Verma SS, Pendergrass SA, Daar ES, Venuto C, Morse GD, Ritchie MD, Haas DW. Multiphenotype association study of patients randomized to initiate antiretroviral regimens in AIDS Clinical Trials Group protocol A5202. Pharmacogenetics and Genomics. PMID 28099408 DOI: 10.1097/Fpc.0000000000000263  0.759
2016 Jones GT, Tromp G, Kuivaniemi H, Gretarsdottir S, Baas AF, Giusti B, Strauss E, van 't Hof FN, Webb T, Erdman R, Ritchie MD, Elmore JR, Verma A, Pendergrass S, Kullo IJ, et al. Meta-Analysis of Genome-Wide Association Studies for Abdominal Aortic Aneurysm Identifies Four New Disease-Specific Risk Loci. Circulation Research. PMID 27899403 DOI: 10.1161/Circresaha.116.308765  0.768
2016 Basile AO, Verma A, Byrska-Bishop M, Pendergrass SA, Darabos C, Lester Kirchner H. PATTERNS IN BIOMEDICAL DATA-HOW DO WE FIND THEM? Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 22: 177-183. PMID 27896973  0.768
2016 Verma A, Verma SS, Pendergrass SA, Crawford DC, Crosslin DR, Kuivaniemi H, Bush WS, Bradford Y, Kullo I, Bielinski SJ, Li R, Denny JC, Peissig P, Hebbring S, De Andrade M, et al. eMERGE Phenome-Wide Association Study (PheWAS) identifies clinical associations and pleiotropy for stop-gain variants. Bmc Medical Genomics. 9: 32. PMID 27535653 DOI: 10.1186/S12920-016-0191-8  0.819
2016 Verma A, Basile AO, Bradford Y, Kuivaniemi H, Tromp G, Carey D, Gerhard GS, Crowe JE, Ritchie MD, Pendergrass SA. Phenome-Wide Association Study to Explore Relationships between Immune System Related Genetic Loci and Complex Traits and Diseases. Plos One. 11: e0160573. PMID 27508393 DOI: 10.1371/Journal.Pone.0160573  0.825
2016 Oetjens MT, Bush WS, Denny JC, Birdwell K, Kodaman N, Verma A, Dilks HH, Pendergrass SA, Ritchie MD, Crawford DC. Evidence for extensive pleiotropy among pharmacogenes. Pharmacogenomics. 0. PMID 27249515 DOI: 10.2217/Pgs-2015-0007  0.732
2016 Verma A, Leader JB, Verma SS, Frase A, Wallace J, Dudek S, Lavage DR, VAN Hout CV, Dewey FE, Penn J, Lopez A, Overton JD, Carey DJ, Ledbetter DH, Kirchner HL, et al. INTEGRATING CLINICAL LABORATORY MEASURES AND ICD-9 CODE DIAGNOSES IN PHENOME-WIDE ASSOCIATION STUDIES. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 21: 168-79. PMID 26776183  0.807
2016 Verma SS, Frase AT, Verma A, Pendergrass SA, Mahony S, Haas DW, Ritchie MD. PHENOME-WIDE INTERACTION STUDY (PheWIS) IN AIDS CLINICAL TRIALS GROUP DATA (ACTG). Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 21: 57-68. PMID 26776173  0.807
2015 Leader JB, Pendergrass SA, Verma A, Carey DJ, Hartzel DN, Ritchie MD, Kirchner HL. Contrasting Association Results between Existing PheWAS Phenotype Definition Methods and Five Validated Electronic Phenotypes. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2015: 824-32. PMID 26958218  0.715
2015 Pendergrass SA, Verma A, Okula A, Hall MA, Crawford DC, Ritchie MD. Phenome-Wide Association Studies: Embracing Complexity for Discovery. Human Heredity. 79: 111-23. PMID 26201697 DOI: 10.1159/000381851  0.824
2015 Moore CB, Verma A, Pendergrass S, Verma SS, Johnson DH, Daar ES, Gulick RM, Haubrich R, Robbins GK, Ritchie MD, Haas DW. Phenome-wide Association Study Relating Pretreatment Laboratory Parameters With Human Genetic Variants in AIDS Clinical Trials Group Protocols. Open Forum Infectious Diseases. 2: ofu113. PMID 25884002 DOI: 10.1093/Ofid/Ofu113  0.809
2015 Pendergrass SA, Verma A, Okula A, Hall MA, Crawford DC, Ritchie MD, Génin E, Devoto M, Li H, Jeng J, Wu Q, Ziegler A, Mwambi H, König IR, Pineda S, et al. Contents Vol. 79, 2015 Human Heredity. 79. DOI: 10.1159/000382044  0.686
2015 Pendergrass SA, Verma A, Okula A, Hall MA, Crawford DC, Ritchie MD. Phenome-Wide Association Studies: Embracing Complexity for Discovery Human Heredity. 79: 111-123. DOI: 10.1159/000381851  0.768
2014 Hall MA, Verma A, Brown-Gentry KD, Goodloe R, Boston J, Wilson S, McClellan B, Sutcliffe C, Dilks HH, Gillani NB, Jin H, Mayo P, Allen M, Schnetz-Boutaud N, Crawford DC, et al. Detection of pleiotropy through a Phenome-wide association study (PheWAS) of epidemiologic data as part of the Environmental Architecture for Genes Linked to Environment (EAGLE) study. Plos Genetics. 10: e1004678. PMID 25474351 DOI: 10.1371/Journal.Pgen.1004678  0.816
2014 Barrie ES, Weinshenker D, Verma A, Pendergrass SA, Lange LA, Ritchie MD, Wilson JG, Kuivaniemi H, Tromp G, Carey DJ, Gerhard GS, Brilliant MH, Hebbring SJ, Cubells JF, Pinsonneault JK, et al. Regulatory polymorphisms in human DBH affect peripheral gene expression and sympathetic activity. Circulation Research. 115: 1017-25. PMID 25326128 DOI: 10.1161/Circresaha.116.304398  0.669
2014 Kim D, Shin H, Sohn KA, Verma A, Ritchie MD, Kim JH. Incorporating inter-relationships between different levels of genomic data into cancer clinical outcome prediction. Methods (San Diego, Calif.). 67: 344-53. PMID 24561168 DOI: 10.1016/J.Ymeth.2014.02.003  0.682
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