| Year |
Citation |
Score |
| 2023 |
Tan Y, Zhu J, Gutierrez Reyes CD, Lin Y, Tan Z, Wu Z, Zhang J, Cano A, Verschleisser S, Mechref Y, Singal AG, Parikh ND, Lubman DM. Discovery of Core-Fucosylated Glycopeptides as Diagnostic Biomarkers for Early HCC in Patients with NASH Cirrhosis Using LC-HCD-PRM-MS/MS. Acs Omega. 8: 12467-12480. PMID 37033807 DOI: 10.1021/acsomega.3c00519 |
0.778 |
|
| 2023 |
Li S, Zhu J, Lubman DM, Zhou H, Tang H. GlycoSLASH: Concurrent Glycopeptide Identification from Multiple Related LC-MS/MS Data Sets by Using Spectral Clustering and Library Searching. Journal of Proteome Research. PMID 36802412 DOI: 10.1021/acs.jproteome.3c00066 |
0.486 |
|
| 2022 |
Pan L, Lin Y, Zhu J, Zhang J, Tan Z, Lubman DM. Large Scale Screening and Quantitative Analysis of Site-Specific N-Glycopeptides from Human Serum in Early Alzheimer's Disease Using LC-HCD-PRM-MS. Journal of Proteomics & Bioinformatics. 15. PMID 37362028 |
0.757 |
|
| 2022 |
Mechref Y, Peng W, Gautam S, Ahmadi P, Lin Y, Zhu J, Zhang J, Liu S, Singal AG, Parikh ND, Lubman DM. Mass spectrometry based biomarkers for early detection of HCC using a glycoproteomic approach. Advances in Cancer Research. 157: 23-56. PMID 36725111 DOI: 10.1016/bs.acr.2022.07.005 |
0.537 |
|
| 2022 |
Reyes CDG, Hakim MA, Atashi M, Goli M, Gautam S, Wang J, Bennett AI, Zhu J, Lubman DM, Mechref Y. LC-MS/MS Isomeric Profiling of -Glycans Derived from Low-Abundant Serum Glycoproteins in Mild Cognitive Impairment Patients. Biomolecules. 12. PMID 36359007 DOI: 10.3390/biom12111657 |
0.517 |
|
| 2022 |
Zhu J, Tan Z, Zhang J, An M, Khaykin VM, Cuneo KC, Parikh ND, Lubman DM. Sequential Method for Analysis of CTCs and Exosomes from the Same Sample of Patient Blood. Acs Omega. 7: 37581-37588. PMID 36312392 DOI: 10.1021/acsomega.2c04428 |
0.816 |
|
| 2022 |
Lin Y, Zhu J, Zhang J, Dai J, Liu S, Arroyo A, Rose M, Singal AG, Parikh ND, Lubman DM. Glycopeptides with Sialyl Lewis Antigen in Serum Haptoglobin as Candidate Biomarkers for Nonalcoholic Steatohepatitis Hepatocellular Carcinoma Using a Higher-Energy Collision-Induced Dissociation Parallel Reaction Monitoring-Mass Spectrometry Method. Acs Omega. 7: 22850-22860. PMID 35811936 DOI: 10.1021/acsomega.2c02600 |
0.544 |
|
| 2022 |
Yin H, Zhu J. Methods for quantification of glycopeptides by liquid separation and mass spectrometry. Mass Spectrometry Reviews. e21771. PMID 35099083 DOI: 10.1002/mas.21771 |
0.762 |
|
| 2021 |
Zhu J, Zhang J, Ji X, Tan Z, Lubman DM. Column-based Technology for CD9-HPLC Immunoaffinity Isolation of Serum Extracellular Vesicles. Journal of Proteome Research. PMID 34473505 DOI: 10.1021/acs.jproteome.1c00549 |
0.767 |
|
| 2021 |
Gutierrez Reyes CD, Huang Y, Atashi M, Zhang J, Zhu J, Liu S, Parikh ND, Singal AG, Dai J, Lubman DM, Mechref Y. PRM-MS Quantitative Analysis of Isomeric -Glycopeptides Derived from Human Serum Haptoglobin of Patients with Cirrhosis and Hepatocellular Carcinoma. Metabolites. 11. PMID 34436504 DOI: 10.3390/metabo11080563 |
0.555 |
|
| 2021 |
Zhang R, Zhu J, Lubman DM, Mechref Y, Tang H. GlycoHybridSeq: Automated Identification of N-Linked Glycopeptides Using Electron Transfer/High-Energy Collision Dissociation (EThcD). Journal of Proteome Research. PMID 34010560 DOI: 10.1021/acs.jproteome.1c00245 |
0.533 |
|
| 2021 |
Lin Y, Zhu J, Pan L, Zhang J, Tan Z, Olivares J, Singal AG, Parikh ND, Lubman DM. A Panel of Glycopeptides as Candidate Biomarkers for Early Diagnosis of NASH Hepatocellular Carcinoma Using a Stepped HCD Method and PRM Evaluation. Journal of Proteome Research. PMID 33929864 DOI: 10.1021/acs.jproteome.1c00175 |
0.784 |
|
| 2020 |
Myronovych A, Peck BCE, An M, Zhu J, Warm A, Kupe A, Lubman DM, Seeley RJ. Intestinal Extracellular Vesicles are Altered by Vertical Sleeve Gastrectomy. American Journal of Physiology. Gastrointestinal and Liver Physiology. PMID 33175569 DOI: 10.1152/ajpgi.00224.2020 |
0.695 |
|
| 2020 |
Ji X, Huang S, Zhang J, Bruce TF, Tan Z, Wang D, Zhu J, Marcus RK, Lubman DM. A novel method of high-purity extracellular vesicle enrichment from microliter-scale human serum for proteomic analysis. Electrophoresis. PMID 33169421 DOI: 10.1002/elps.202000223 |
0.748 |
|
| 2020 |
Yin H, Zhu J, Wang M, Yao ZP, Lubman DM. The Quantitative Analysis of Alpha-1-Antitrypsin Glycosylation Isoforms in HCC Patients Using LC-HCD-PRM-MS. Analytical Chemistry. PMID 32426967 DOI: 10.1021/Acs.Analchem.0C00420 |
0.818 |
|
| 2020 |
Zhu J, Huang J, Zhang J, Chen Z, Lin Y, Grigorean G, Li L, Liu S, Singal AG, Parikh ND, Lubman DM. Glycopeptide Biomarkers in Serum Haptoglobin for Hepatocellular Carcinoma Detection in Patients with Non-Alcoholic Steatohepatitis. Journal of Proteome Research. PMID 32412768 DOI: 10.1021/Acs.Jproteome.0C00270 |
0.601 |
|
| 2020 |
Tan Z, Zhu J, Stemmer PM, Sun L, Yang Z, Schultz K, Gaffrey MJ, Cesnik AJ, Yi X, Hao X, Shortreed MR, Shi T, Lubman DM. Comprehensive Detection of Single Amino Acid Variants and Evaluation of Their Deleterious Potential in a PANC-1 Cell Line. Journal of Proteome Research. PMID 32058723 DOI: 10.1021/Acs.Jproteome.9B00840 |
0.753 |
|
| 2020 |
Peta V, Zhu J, Lubman DM, Huguet S, Imbert-Bismutd F, Bolbach G, Clodic G, Matheron L, Ngo Y, Raluca P, Housset C, Rezai K, Poynard T. Input of serum haptoglobin fucosylation profile in the diagnosis of hepatocellular carcinoma in patients with non-cirrhotic liver disease. Clinics and Research in Hepatology and Gastroenterology. PMID 31964615 DOI: 10.1016/J.Clinre.2019.12.010 |
0.563 |
|
| 2019 |
Liang J, Zhu J, Wang M, Singal AG, Odewole M, Kagan S, Renteria V, Liu S, Parikh ND, Lubman DM. Evaluation of AGP Fucosylation as a Marker for Hepatocellular Carcinoma of Three Different Etiologies. Scientific Reports. 9: 11580. PMID 31399619 DOI: 10.1038/S41598-019-48043-1 |
0.643 |
|
| 2019 |
Wu J, An M, Zhu J, Tan Z, Chen GY, Stidham RW, Lubman DM. A Method for Isolation and Proteomic Analysis of Outer Membrane Vesicles from Fecal Samples by LC-MS/MS. Journal of Proteomics & Bioinformatics. 12: 38-42. PMID 31057293 DOI: 10.4172/0974-276X.1000494 |
0.787 |
|
| 2019 |
Peta V, Lubman D, Zhu J, Keyvan R, Samuel H, Francoise I, Gerard B, Gilles C, Lucrece M, Housset C, Poynard T. THU-484-Mass spectrometric analysis of serum haptoglobin fucolysation in patients stratified according to fibrosis stages, and the presence of hepatocellular carcinoma Journal of Hepatology. 70. DOI: 10.1016/S0618-8278(19)30731-5 |
0.575 |
|
| 2018 |
Zhu J, Warner E, Parikh ND, Lubman DM. Glycoproteomic markers of hepatocellular carcinoma-mass spectrometry based approaches. Mass Spectrometry Reviews. PMID 30472795 DOI: 10.1002/Mas.21583 |
0.617 |
|
| 2018 |
Zhu J, Chen Z, Zhang J, An M, Wu J, Yu Q, Skilton SJ, Bern M, Ilker Sen K, Li L, Lubman DM. Differential Quantitative Determination of Site-Specific Intact N-Glycopeptides in Serum Haptoglobin between Hepatocellular Carcinoma and Cirrhosis Using LC-EThcD-MS/MS. Journal of Proteome Research. PMID 30370771 DOI: 10.1021/Acs.Jproteome.8B00654 |
0.783 |
|
| 2018 |
An M, Wu J, Zhu J, Lubman DM. A Comparison of an Optimized Ultracentrifugation Method versus Size-Exclusion Chromatography for Isolation of Exosomes from Human Serum. Journal of Proteome Research. PMID 30192545 DOI: 10.1021/Acs.Jproteome.8B00479 |
0.764 |
|
| 2018 |
Wang M, Zhu J, Lubman DM, Gao C. Aberrant glycosylation and cancer biomarker discovery: a promising and thorny journey. Clinical Chemistry and Laboratory Medicine. PMID 30138110 DOI: 10.1515/Cclm-2018-0379 |
0.645 |
|
| 2018 |
An M, Zhu J, Wu J, Cuneo KC, Lubman DM. Circulating Exosomes from Pancreatic Cancer Accelerate the Migration and Proliferation of PANC-1 Cells. Journal of Proteome Research. PMID 29494150 DOI: 10.1021/Acs.Jproteome.8B00014 |
0.794 |
|
| 2017 |
Wang M, Fang M, Zhu J, Feng H, Warner E, Yi C, Ji J, Gu X, Gao C. Serum N-glycans outperform CA19-9 in diagnosis of extrahepatic cholangiocarcinoma. Electrophoresis. PMID 28752594 DOI: 10.1002/Elps.201700084 |
0.477 |
|
| 2017 |
Huang Y, Zhou S, Zhu J, Lubman DM, Mechref Y. LC-MS/MS isomeric profiling of permethylated N-glycans derived from serum haptoglobin of hepatocellular carcinoma (HCC) and cirrhotic patients. Electrophoresis. PMID 28543513 DOI: 10.1002/Elps.201700025 |
0.624 |
|
| 2017 |
Zhu J, Wu J, Pei X, Tan Z, Shi J, Lubman DM. Annexin A10 is a candidate marker associated with the progression of pancreatic precursor lesions to adenocarcinoma. Plos One. 12: e0175039. PMID 28369074 DOI: 10.1371/Journal.Pone.0175039 |
0.77 |
|
| 2017 |
An M, Lohse I, Tan Z, Zhu J, Wu J, Kurapati H, Morgan MA, Lawrence TS, Cuneo KC, Lubman DM. Quantitative proteomic analysis of serum exosomes from patients with locally advanced pancreatic cancer undergoing chemoradiotherapy. Journal of Proteome Research. PMID 28240915 DOI: 10.1021/Acs.Jproteome.7B00024 |
0.795 |
|
| 2016 |
Yang R, Liu X, Thakolwiboon S, Zhu J, Pei X, An M, Tan Z, Lubman DM. Protein Markers Associated with an ALDH Sub-Population in Colorectal Cancer. Journal of Proteomics & Bioinformatics. 9: 238-247. PMID 28503055 DOI: 10.4172/Jpb.1000412 |
0.794 |
|
| 2016 |
Wu J, Zhu J, Yin H, Liu X, An M, Pudlo NA, Martens EC, Chen GY, Lubman DM. Development of an Integrated Pipeline for Profiling Microbial Proteins from Mouse Fecal Samples by LC-MS/MS. Journal of Proteome Research. PMID 27559751 DOI: 10.1021/Acs.Jproteome.6B00450 |
0.781 |
|
| 2016 |
Yin H, Zhu J, Wu J, Tan Z, An M, Zhou S, Mechref Y, Lubman DM. A procedure for the analysis of site-specific and structure-specific fucosylation in Alpha-1-Antitrypsin. Electrophoresis. PMID 27439567 DOI: 10.1002/Elps.201600176 |
0.77 |
|
| 2016 |
Pei X, Zhu J, Yang R, Tan Z, An M, Shi J, Lubman DM. CD90 and CD24 Co-Expression Is Associated with Pancreatic Intraepithelial Neoplasias. Plos One. 11: e0158021. PMID 27332878 DOI: 10.1371/Journal.Pone.0158021 |
0.774 |
|
| 2015 |
Zhang Y, Zhu J, Yin H, Marrero J, Zhang XX, Lubman DM. ESI-LC-MS Method for Haptoglobin Fucosylation Analysis in Hepatocellular Carcinoma and Liver Cirrhosis. Journal of Proteome Research. PMID 26503433 DOI: 10.1021/Acs.Jproteome.5B00792 |
0.809 |
|
| 2015 |
Zhu J, Wu J, Yin H, Marrero J, Lubman DM. Mass spectrometric N-glycan analysis of haptoglobin from patient serum samples using a 96-well plate format. Journal of Proteome Research. PMID 26448449 DOI: 10.1021/Acs.Jproteome.5B00662 |
0.818 |
|
| 2015 |
Yin H, Tan Z, Wu J, Zhu J, Shedden KA, Marrero J, Lubman DM. Mass Selected Site-specific Core-fucosylation of Serum Proteins in Hepatocellular Carcinoma. Journal of Proteome Research. PMID 26403951 DOI: 10.1021/Acs.Jproteome.5B00718 |
0.798 |
|
| 2015 |
Wu J, Yin H, Zhu J, Buckanovich RJ, Thorpe JD, Dai J, Urban N, Lubman DM. Validation of LRG1 as a potential biomarker for detection of epithelial ovarian cancer by a blinded study. Plos One. 10: e0121112. PMID 25799488 DOI: 10.1371/Journal.Pone.0121112 |
0.783 |
|
| 2015 |
Tan Z, Yin H, Nie S, Lin Z, Zhu J, Ruffin MT, Anderson MA, Simeone DM, Lubman DM. Large-scale identification of core-fucosylated glycopeptide sites in pancreatic cancer serum using mass spectrometry. Journal of Proteome Research. 14: 1968-78. PMID 25732060 DOI: 10.1021/Acs.Jproteome.5B00068 |
0.794 |
|
| 2015 |
Nie S, Gurrea M, Zhu J, Thakolwiboon S, Heth JA, Muraszko KM, Fan X, Lubman DM. Tenascin-C: a novel candidate marker for cancer stem cells in glioblastoma identified by tissue microarrays. Journal of Proteome Research. 14: 814-22. PMID 25469866 DOI: 10.1021/Pr5008653 |
0.756 |
|
| 2014 |
Thakolwiboon S, Zhu J, Liang Q, Welling TH, Zhang M, Lubman DM. Heterogeneity of The CD90(+) Population in Different Stages of Hepatocarcinogenesis. Journal of Proteomics & Bioinformatics. 7: 296-302. PMID 25580065 DOI: 10.4172/Jpb.1000332 |
0.567 |
|
| 2014 |
Zhu J, Thakolwiboon S, Liu X, Zhang M, Lubman DM. Overexpression of CD90 (Thy-1) in pancreatic adenocarcinoma present in the tumor microenvironment. Plos One. 9: e115507. PMID 25536077 DOI: 10.1371/Journal.Pone.0115507 |
0.635 |
|
| 2014 |
Zhu J, Lin Z, Wu J, Yin H, Dai J, Feng Z, Marrero J, Lubman DM. Analysis of serum haptoglobin fucosylation in hepatocellular carcinoma and liver cirrhosis of different etiologies. Journal of Proteome Research. 13: 2986-97. PMID 24807840 DOI: 10.1021/Pr500128T |
0.783 |
|
| 2014 |
Yin H, Lin Z, Nie S, Wu J, Tan Z, Zhu J, Dai J, Feng Z, Marrero J, Lubman DM. Mass-selected site-specific core-fucosylation of ceruloplasmin in alcohol-related hepatocellular carcinoma. Journal of Proteome Research. 13: 2887-96. PMID 24799124 DOI: 10.1021/Pr500043K |
0.778 |
|
| 2014 |
Wu J, Zhu J, Yin H, Buckanovich RJ, Lubman DM. Analysis of glycan variation on glycoproteins from serum by the reverse lectin-based ELISA assay. Journal of Proteome Research. 13: 2197-204. PMID 24575722 DOI: 10.1021/Pr401061C |
0.804 |
|
| 2014 |
Nie S, Lo A, Wu J, Zhu J, Tan Z, Simeone DM, Anderson MA, Shedden KA, Ruffin MT, Lubman DM. Glycoprotein biomarker panel for pancreatic cancer discovered by quantitative proteomics analysis. Journal of Proteome Research. 13: 1873-84. PMID 24571389 DOI: 10.1021/Pr400967X |
0.799 |
|
| 2014 |
Zhu J, Thakolwiboon S, Liu X, Zhang M, Lubman DM. Distribution of CD90 in PDAC of early and late stages evaluated by immunofluorescence staining (green). Plos One. DOI: 10.1371/Journal.Pone.0115507.G004 |
0.6 |
|
| 2013 |
Zhu J, Nie S, Wu J, Lubman DM. Target proteomic profiling of frozen pancreatic CD24+ adenocarcinoma tissues by immuno-laser capture microdissection and nano-LC-MS/MS. Journal of Proteome Research. 12: 2791-804. PMID 23679566 DOI: 10.1021/Pr400139C |
0.793 |
|
| 2013 |
Nie S, Lo A, Zhu J, Wu J, Ruffin MT, Lubman DM. Isobaric protein-level labeling strategy for serum glycoprotein quantification analysis by liquid chromatography-tandem mass spectrometry. Analytical Chemistry. 85: 5353-7. PMID 23638883 DOI: 10.1021/Ac400838S |
0.76 |
|
| 2013 |
He J, Zhu J, Liu Y, Wu J, Nie S, Heth JA, Muraszko KM, Fan X, Lubman DM. Immunohistochemical staining, laser capture microdissection, and filter-aided sample preparation-assisted proteomic analysis of target cell populations within tissue samples. Electrophoresis. 34: 1627-36. PMID 23436586 DOI: 10.1002/Elps.201200566 |
0.796 |
|
| 2012 |
Zhu J, He J, Liu Y, Simeone DM, Lubman DM. Identification of glycoprotein markers for pancreatic cancer CD24+CD44+ stem-like cells using nano-LC-MS/MS and tissue microarray. Journal of Proteome Research. 11: 2272-81. PMID 22335271 DOI: 10.1021/Pr201059G |
0.807 |
|
| 2012 |
He J, Liu Y, Zhu T, Zhu J, Dimeco F, Vescovi AL, Heth JA, Muraszko KM, Fan X, Lubman DM. CD90 is identified as a candidate marker for cancer stem cells in primary high-grade gliomas using tissue microarrays. Molecular & Cellular Proteomics : McP. 11: M111.010744. PMID 22203689 DOI: 10.1074/Mcp.M111.010744 |
0.78 |
|
| 2012 |
Namm JP, Li Q, Lao X, Lubman DM, He J, Liu Y, Zhu J, Wei S, Chang AE. B lymphocytes as effector cells in the immunotherapy of cancer. Journal of Surgical Oncology. 105: 431-5. PMID 21898417 DOI: 10.1002/Jso.22093 |
0.756 |
|
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