Marat Yusupov - Publications

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74 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G. mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature. 625: 393-400. PMID 38030725 DOI: 10.1038/s41586-023-06780-4  0.433
2023 Garaeva N, Fatkhullin B, Murzakhanov F, Gafurov M, Golubev A, Bikmullin A, Glazyrin M, Kieffer B, Jenner L, Klochkov V, Aganov A, Rogachev A, Ivankov O, Validov S, Yusupov M, et al. Structural aspects of RimP binding on small ribosomal subunit from Staphylococcus aureus. Structure (London, England : 1993). 32: 74-82.e5. PMID 38000368 DOI: 10.1016/j.str.2023.10.014  0.388
2023 Bikmullin AG, Fatkhullin B, Stetsenko A, Gabdulkhakov A, Garaeva N, Nurullina L, Klochkova E, Golubev A, Khusainov I, Trachtmann N, Blokhin D, Guskov A, Validov S, Usachev K, Yusupov M. Yet Another Similarity between Mitochondrial and Bacterial Ribosomal Small Subunit Biogenesis Obtained by Structural Characterization of RbfA from . International Journal of Molecular Sciences. 24. PMID 36768442 DOI: 10.3390/ijms24032118  0.45
2022 Fatkhullin BF, Gabdulkhakov AG, Yusupov MM. Is RsfS a Hibernation Factor or a Ribosome Biogenesis Factor? Biochemistry. Biokhimiia. 87: 500-510. PMID 35790407 DOI: 10.1134/S0006297922060025  0.319
2021 Belinite M, Khusainov I, Soufari H, Marzi S, Romby P, Yusupov M, Hashem Y. Stabilization of Ribosomal RNA of the Small Subunit by Spermidine in . Frontiers in Molecular Biosciences. 8: 738752. PMID 34869582 DOI: 10.3389/fmolb.2021.738752  0.435
2021 Djumagulov M, Demeshkina N, Jenner L, Rozov A, Yusupov M, Yusupova G. Accuracy mechanism of eukaryotic ribosome translocation. Nature. PMID 34853469 DOI: 10.1038/s41586-021-04131-9  0.455
2021 Pellegrino S, Terrosu S, Yusupova G, Yusupov M. Inhibition of the Eukaryotic 80S Ribosome as a Potential Anticancer Therapy: A Structural Perspective. Cancers. 13. PMID 34503202 DOI: 10.3390/cancers13174392  0.356
2021 Yusupova G, Yusupov M. A Path to the Atomic-Resolution Structures of Prokaryotic and Eukaryotic Ribosomes. Biochemistry. Biokhimiia. 86: 926-941. PMID 34488570 DOI: 10.1134/S0006297921080046  0.468
2020 Usachev KS, Yusupov MM, Validov SZ. Hibernation as a Stage of Ribosome Functioning. Biochemistry. Biokhimiia. 85: 1434-1442. PMID 33280583 DOI: 10.1134/s0006297920110115  0.31
2020 Golubev A, Fatkhullin B, Khusainov I, Jenner L, Gabdulkhakov A, Validov S, Yusupova G, Yusupov M, Usachev K. Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Å resolution. Febs Letters. PMID 32852796 DOI: 10.1002/1873-3468.13915  0.458
2020 Bikmullin AG, Nurullina LI, Garaeva NS, Klochkova EA, Blokhin DS, Golubev AA, Validov SZ, Khusainov IS, Usachev KS, Yusupov MM. In vitro Reconstitution of the S. aureus 30S Ribosomal Subunit and RbfA Factor Complex for Structural Studies. Biochemistry. Biokhimiia. 85: 545-552. PMID 32571184 DOI: 10.1134/S000629792005003X  0.338
2020 Khusainov I, Fatkhullin B, Pellegrino S, Bikmullin A, Liu WT, Gabdulkhakov A, Shebel AA, Golubev A, Zeyer D, Trachtmann N, Sprenger GA, Validov S, Usachev K, Yusupova G, Yusupov M. Mechanism of ribosome shutdown by RsfS in Staphylococcus aureus revealed by integrative structural biology approach. Nature Communications. 11: 1656. PMID 32245971 DOI: 10.1038/s41467-020-15517-0  0.402
2019 Rozov A, Khusainov I, El Omari K, Duman R, Mykhaylyk V, Yusupov M, Westhof E, Wagner A, Yusupova G. Importance of potassium ions for ribosome structure and function revealed by long-wavelength X-ray diffraction. Nature Communications. 10: 2519. PMID 31175275 DOI: 10.1038/s41467-019-10409-4  0.318
2019 Usachev KS, Validov SZ, Khusainov IS, Varfolomeev AA, Klochkov VV, Aganov AV, Yusupov MM. Solution structure of the N-terminal domain of the Staphylococcus aureus hibernation promoting factor. Journal of Biomolecular Nmr. PMID 31165320 DOI: 10.1007/s10858-019-00254-4  0.343
2019 Westhof E, Yusupov M, Yusupova G. The multiple flavors of GoU pairs in RNA. Journal of Molecular Recognition : Jmr. e2782. PMID 31033092 DOI: 10.1002/jmr.2782  0.38
2018 Flygaard RK, Boegholm N, Yusupov M, Jenner LB. Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism. Nature Communications. 9: 4179. PMID 30301898 DOI: 10.1038/s41467-018-06724-x  0.359
2018 Rozov A, Wolff P, Grosjean H, Yusupov M, Yusupova G, Westhof E. Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria. Nucleic Acids Research. PMID 29931292 DOI: 10.1093/nar/gky547  0.322
2018 Pellegrino S, Demeshkina N, Mancera-Martinez E, Melnikov S, Simonetti A, Myasnikov A, Yusupov M, Yusupova G, Hashem Y. Structural insights into the role of diphthamide on elongation factor 2 in messenger RNA reading frame maintenance. Journal of Molecular Biology. PMID 29886014 DOI: 10.1016/j.jmb.2018.06.006  0.464
2017 Prokhorova I, Altman RB, Djumagulov M, Shrestha JP, Urzhumtsev A, Ferguson A, Chang CT, Yusupov M, Blanchard SC, Yusupova G. Aminoglycoside interactions and impacts on the eukaryotic ribosome. Proceedings of the National Academy of Sciences of the United States of America. 114: E10899-E10908. PMID 29208708 DOI: 10.1073/Pnas.1715501114  0.393
2017 Usachev KS, Ayupov RK, Validov SZ, Khusainov IS, Yusupov MM. NMR assignments of the N-terminal domain of Staphylococcus aureus hibernation promoting factor (SaHPF). Biomolecular Nmr Assignments. PMID 28980143 DOI: 10.1007/s12104-017-9783-2  0.31
2017 Khusainov I, Vicens Q, Ayupov R, Usachev K, Myasnikov A, Simonetti A, Validov S, Kieffer B, Yusupova G, Yusupov M, Hashem Y. Structures and dynamics of hibernating ribosomes from Staphylococcus aureus mediated by intermolecular interactions of HPF. The Embo Journal. PMID 28645916 DOI: 10.15252/embj.201696105  0.388
2017 McClary B, Zinshteyn B, Meyer M, Jouanneau M, Pellegrino S, Yusupova G, Schuller A, Reyes JCP, Lu J, Guo Z, Ayinde S, Luo C, Dang Y, Romo D, Yusupov M, et al. Inhibition of Eukaryotic Translation by the Antitumor Natural Product Agelastatin A. Cell Chemical Biology. PMID 28457705 DOI: 10.1016/J.Chembiol.2017.04.006  0.544
2017 Yusupova G, Yusupov M. Crystal structure of eukaryotic ribosome and its complexes with inhibitors. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 372. PMID 28138070 DOI: 10.1098/rstb.2016.0184  0.485
2016 Khusainov I, Vicens Q, Bochler A, Grosse F, Myasnikov A, Ménétret JF, Chicher J, Marzi S, Romby P, Yusupova G, Yusupov M, Hashem Y. Structure of the 70S ribosome from human pathogen Staphylococcus aureus. Nucleic Acids Research. 44: 10491-10504. PMID 27906650 DOI: 10.1093/nar/gkw933  0.347
2016 Rozov A, Demeshkina N, Westhof E, Yusupov M, Yusupova G. New Structural Insights into Translational Miscoding. Trends in Biochemical Sciences. 41: 798-814. PMID 27372401 DOI: 10.1016/j.tibs.2016.06.001  0.31
2016 Prokhorova IV, Akulich KA, Makeeva DS, Osterman IA, Skvortsov DA, Sergiev PV, Dontsova OA, Yusupova G, Yusupov MM, Dmitriev SE. Amicoumacin A induces cancer cell death by targeting the eukaryotic ribosome. Scientific Reports. 6: 27720. PMID 27296282 DOI: 10.1038/srep27720  0.308
2016 Wilson D, Spahn C, Yusupov M. Ribosomes Structure and Mechanisms in Regulation of Protein Synthesis Part I. Journal of Molecular Biology. 428: 2133. PMID 27234690 DOI: 10.1016/j.jmb.2016.05.002  0.346
2016 Melnikov S, Mailliot J, Shin BS, Rigger L, Yusupova G, Micura R, Dever TE, Yusupov M. Crystal structure of hypusine-containing translation factor eIF5A bound to a rotated eukaryotic ribosome. Journal of Molecular Biology. PMID 27196944 DOI: 10.1016/J.Jmb.2016.05.011  0.45
2016 Rozov A, Westhof E, Yusupov M, Yusupova G. The ribosome prohibits the G•U wobble geometry at the first position of the codon-anticodon helix. Nucleic Acids Research. 44: 6434-41. PMID 27174928 DOI: 10.1093/nar/gkw431  0.44
2016 Mailliot J, de Loubresse NG, Yusupova G, Meskauskas A, Dinman JD, Yusupov M. Crystal structures of the uL3 mutant ribosome: illustration of the importance of ribosomal proteins for translation efficiency. Journal of Molecular Biology. PMID 26906928 DOI: 10.1016/J.Jmb.2016.02.013  0.658
2016 Rozov A, Demeshkina N, Khusainov I, Westhof E, Yusupov M, Yusupova G. Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code. Nature Communications. 7: 10457. PMID 26791911 DOI: 10.1038/ncomms10457  0.34
2016 Agalarov S, Yusupov M, Yusupova G. Reconstitution of Functionally Active Thermus thermophilus 30S Ribosomal Subunit from Ribosomal 16S RNA and Ribosomal Proteins. Methods in Molecular Biology (Clifton, N.J.). 1320: 303-14. PMID 26227051 DOI: 10.1007/978-1-4939-2763-0_19  0.5
2015 Melnikov S, Ben-Shem A, Yusupova G, Yusupov M. Insights into the origin of the nuclear localization signals in conserved ribosomal proteins. Nature Communications. 6: 7382. PMID 26066547 DOI: 10.1038/Ncomms8382  0.514
2015 Rozov A, Demeshkina N, Westhof E, Yusupov M, Yusupova G. Structural insights into the translational infidelity mechanism. Nature Communications. 6: 7251. PMID 26037619 DOI: 10.1038/Ncomms8251  0.467
2015 Yusupova G, Yusupov M. Ribosome biochemistry in crystal structure determination. Rna (New York, N.Y.). 21: 771-3. PMID 25780230 DOI: 10.1261/Rna.050039.115  0.547
2014 Garreau de Loubresse N, Prokhorova I, Holtkamp W, Rodnina MV, Yusupova G, Yusupov M. Structural basis for the inhibition of the eukaryotic ribosome. Nature. 513: 517-22. PMID 25209664 DOI: 10.1038/Nature13737  0.456
2014 Westhof E, Yusupov M, Yusupova G. Recognition of Watson-Crick base pairs: constraints and limits due to geometric selection and tautomerism. F1000prime Reports. 6: 19. PMID 24765524 DOI: 10.12703/P6-19  0.317
2014 Yusupova G, Yusupov M. High-resolution structure of the eukaryotic 80S ribosome. Annual Review of Biochemistry. 83: 467-86. PMID 24580643 DOI: 10.1146/Annurev-Biochem-060713-035445  0.577
2014 Ban N, Beckmann R, Cate JH, Dinman JD, Dragon F, Ellis SR, Lafontaine DL, Lindahl L, Liljas A, Lipton JM, McAlear MA, Moore PB, Noller HF, Ortega J, Panse VG, ... ... Yusupov M, et al. A new system for naming ribosomal proteins. Current Opinion in Structural Biology. 24: 165-9. PMID 24524803 DOI: 10.1016/J.Sbi.2014.01.002  0.698
2013 Demeshkina N, Jenner L, Westhof E, Yusupov M, Yusupova G. New structural insights into the decoding mechanism: translation infidelity via a G·U pair with Watson-Crick geometry. Febs Letters. 587: 1848-57. PMID 23707250 DOI: 10.1016/j.febslet.2013.05.009  0.348
2013 Jenner L, Starosta AL, Terry DS, Mikolajka A, Filonava L, Yusupov M, Blanchard SC, Wilson DN, Yusupova G. Structural basis for potent inhibitory activity of the antibiotic tigecycline during protein synthesis. Proceedings of the National Academy of Sciences of the United States of America. 110: 3812-6. PMID 23431179 DOI: 10.1073/Pnas.1216691110  0.359
2013 Yusupov M. Structure of bacterial and yeast ribosome Acta Crystallographica Section a Foundations of Crystallography. 69: s19-s19. DOI: 10.1107/S0108767313099819  0.433
2012 Jenner L, Melnikov S, Garreau de Loubresse N, Ben-Shem A, Iskakova M, Urzhumtsev A, Meskauskas A, Dinman J, Yusupova G, Yusupov M. Crystal structure of the 80S yeast ribosome. Current Opinion in Structural Biology. 22: 759-67. PMID 22884264 DOI: 10.1016/J.Sbi.2012.07.013  0.629
2012 Melnikov S, Ben-Shem A, Garreau de Loubresse N, Jenner L, Yusupova G, Yusupov M. One core, two shells: bacterial and eukaryotic ribosomes. Nature Structural & Molecular Biology. 19: 560-7. PMID 22664983 DOI: 10.1038/Nsmb.2313  0.535
2012 Demeshkina N, Jenner L, Westhof E, Yusupov M, Yusupova G. A new understanding of the decoding principle on the ribosome. Nature. 484: 256-9. PMID 22437501 DOI: 10.1038/Nature10913  0.529
2011 Ben-Shem A, Garreau de Loubresse N, Melnikov S, Jenner L, Yusupova G, Yusupov M. The structure of the eukaryotic ribosome at 3.0 Å resolution. Science (New York, N.Y.). 334: 1524-9. PMID 22096102 DOI: 10.1126/Science.1212642  0.585
2011 Vasiliev NN, Jenner L, Yusupov MM, Chetverin AB. Isolation and crystallization of a chimeric Qβ replicase containing Thermus thermophilus EF-Ts. Biochemistry. Biokhimiia. 75: 989-94. PMID 21073419 DOI: 10.1134/S0006297910080067  0.36
2010 Ben-Shem A, Jenner L, Yusupova G, Yusupov M. Crystal structure of the eukaryotic ribosome. Science (New York, N.Y.). 330: 1203-9. PMID 21109664 DOI: 10.1126/Science.1194294  0.556
2010 Jenner L, Demeshkina N, Yusupova G, Yusupov M. Structural rearrangements of the ribosome at the tRNA proofreading step. Nature Structural & Molecular Biology. 17: 1072-8. PMID 20694005 DOI: 10.1038/Nsmb.1880  0.496
2010 Jenner LB, Demeshkina N, Yusupova G, Yusupov M. Structural aspects of messenger RNA reading frame maintenance by the ribosome. Nature Structural & Molecular Biology. 17: 555-60. PMID 20400952 DOI: 10.1038/Nsmb.1790  0.455
2010 Demeshkina N, Jenner L, Yusupova G, Yusupov M. Interactions of the ribosome with mRNA and tRNA. Current Opinion in Structural Biology. 20: 325-32. PMID 20392630 DOI: 10.1016/J.Sbi.2010.03.002  0.522
2009 Fechter P, Chevalier C, Yusupova G, Yusupov M, Romby P, Marzi S. Ribosomal initiation complexes probed by toeprinting and effect of trans-acting translational regulators in bacteria. Methods in Molecular Biology (Clifton, N.J.). 540: 247-63. PMID 19381565 DOI: 10.1007/978-1-59745-558-9_18  0.356
2009 Simonetti A, Marzi S, Jenner L, Myasnikov A, Romby P, Yusupova G, Klaholz BP, Yusupov M. A structural view of translation initiation in bacteria. Cellular and Molecular Life Sciences : Cmls. 66: 423-36. PMID 19011758 DOI: 10.1007/S00018-008-8416-4  0.509
2008 Simonetti A, Marzi S, Myasnikov AG, Fabbretti A, Yusupov M, Gualerzi CO, Klaholz BP. Structure of the 30S translation initiation complex. Nature. 455: 416-20. PMID 18758445 DOI: 10.1038/Nature07192  0.51
2007 Marzi S, Myasnikov AG, Serganov A, Ehresmann C, Romby P, Yusupov M, Klaholz BP. Structured mRNAs regulate translation initiation by binding to the platform of the ribosome. Cell. 130: 1019-31. PMID 17889647 DOI: 10.1016/J.Cell.2007.07.008  0.423
2007 Jenner L, Rees B, Yusupov M, Yusupova G. Messenger RNA conformations in the ribosomal E site revealed by X-ray crystallography Embo Reports. 8: 846-850. PMID 17721443 DOI: 10.1038/sj.embor.7401044  0.389
2006 Yusupova G, Jenner L, Rees B, Moras D, Yusupov M. Structural basis for messenger RNA movement on the ribosome. Nature. 444: 391-4. PMID 17051149 DOI: 10.1107/S0108767307099643  0.535
2006 Lomakin IB, Shirokikh NE, Yusupov MM, Hellen CU, Pestova TV. The fidelity of translation initiation: reciprocal activities of eIF1, IF3 and YciH. The Embo Journal. 25: 196-210. PMID 16362046 DOI: 10.1038/sj.emboj.7600904  0.312
2005 Myasnikov AG, Marzi S, Simonetti A, Giuliodori AM, Gualerzi CO, Yusupova G, Yusupov M, Klaholz BP. Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome. Nature Structural & Molecular Biology. 12: 1145-9. PMID 16284619 DOI: 10.1038/Nsmb1012  0.456
2005 Jenner L, Romby P, Rees B, Schulze-Briese C, Springer M, Ehresmann C, Ehresmann B, Moras D, Yusupova G, Yusupov M. Translational operator of mRNA on the ribosome: how repressor proteins exclude ribosome binding. Science (New York, N.Y.). 308: 120-3. PMID 15802605 DOI: 10.1126/Science.1105639  0.409
2002 Noller HF, Yusupov MM, Yusupova GZ, Baucom A, Cate JHD. Translocation of tRNA during protein synthesis Febs Letters. 514: 11-16. PMID 11904173 DOI: 10.1016/S0014-5793(02)02327-X  0.591
2001 Noller HF, Yusupov MM, Yusupova GZ, Baucom A, Lieberman K, Lancaster L, Dallas A, Fredrick K, Earnest TN, Cate JHD. Structure of the ribosome at 5.5 Å resolution and its interactions with functional ligands Cold Spring Harbor Symposia On Quantitative Biology. 66: 57-66. PMID 12762008 DOI: 10.1101/Sqb.2001.66.57  0.658
2001 Yusupova GZ, Yusupov MM, Cate JHD, Noller HF. The path of messenger RNA through the ribosome Cell. 106: 233-241. PMID 11511350 DOI: 10.1016/S0092-8674(01)00435-4  0.568
2001 Yusupov MM, Yusupova GZ, Baucom A, Lieberman K, Earnest TN, Cate JHD, Noller HF. Crystal structure of the ribosome at 5.5 Å resolution Science. 292: 883-896. PMID 11283358 DOI: 10.1126/Science.1060089  0.667
2000 Lancaster L, Culver GM, Yusupova GZ, Cate JH, Yusupov MM, Noller HF. The location of protein S8 and surrounding elements of 16S rRNA in the 70S ribosome from combined use of directed hydroxyl radical probing and X-ray crystallography Rna. 6: 717-729. PMID 10836793 DOI: 10.1017/S1355838200000303  0.706
1999 Ennifar E, Yusupov M, Walter P, Marquet R, Ehresmann B, Ehresmann C, Dumas P. The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges. Structure (London, England : 1993). 7: 1439-49. PMID 10574792 DOI: 10.1016/S0969-2126(00)80033-7  0.477
1999 Culver GM, Cate JH, Yusupova GZ, Yusupov MM, Noller HF. Identification of an RNA-protein bridge spanning the ribosomal subunit interface Science. 285: 2133-2135. PMID 10497132 DOI: 10.1126/Science.285.5436.2133  0.722
1999 Cate JH, Yusupov MM, Yusupova GZ, Earnest TN, Noller HF. X-ray crystal structures of 70S ribosome functional complexes Science. 285: 2095-2104. PMID 10497122 DOI: 10.1126/Science.285.5436.2095  0.715
1999 Yusupov M, Walter P, Marquet R, Ehresmann C, Ehresmann B, Dumas P. Crystallization of the dimerization-initiation site of genomic HIV-1 RNA: preliminary crystallographic results. Acta Crystallographica. Section D, Biological Crystallography. 55: 281-4. PMID 10089425 DOI: 10.1107/S0907444998008506  0.448
1996 Yusupova G, Lanchy JM, Yusupov M, Keith G, Le Grice SF, Ehresmann C, Ehresmann B, Marquet R. Primer selection by HIV-1 reverse transcriptase on RNA-tRNA(3Lys) and DNA-tRNA(3Lys) hybrids. Journal of Molecular Biology. 261: 315-21. PMID 8780773 DOI: 10.1006/Jmbi.1996.0463  0.348
1992 Yusupov MM, Garber MB, Vasiliev VD, Spirin AS. Thermus thermophilus ribosomes for crystallographic studies. Biochimie. 73: 887-97. PMID 1720668 DOI: 10.1016/0300-9084(91)90130-S  0.646
1990 Yusupov MM, Spirina TN. Accessibility of ribosomal proteins to trypsin in Thermus thermophilus ribosomes Biopolymers and Cell. 6: 65-69. DOI: 10.7124/BC.00027F  0.382
1989 Yusupov MM, Spirin AS. Hot tritium bombardment technique for ribosome surface topography. Methods in Enzymology. 164: 426-39. PMID 3071675 DOI: 10.1016/S0076-6879(88)64059-6  0.479
1986 Yusupov MM, Spirin AS. Are there proteins between the ribosomal subunits? Hot tritium bombardment experiments. Febs Letters. 197: 229-33. PMID 3512304 DOI: 10.1016/0014-5793(86)80332-5  0.546
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