| Year |
Citation |
Score |
| 2020 |
Orengo C, Velankar S, Wodak S, Zoete V, Bonvin AMJJ, Elofsson A, Feenstra KA, Gerloff DL, Hamelryck T, Hancock JM, Helmer-Citterich M, Hospital A, Orozco M, Perrakis A, Rarey M, et al. A community proposal to integrate structural bioinformatics activities in ELIXIR (3D-Bioinfo Community). F1000research. 9. PMID 32566135 DOI: 10.12688/F1000Research.20559.1 |
0.353 |
|
| 2019 |
Adinolfi M, Pietrosanto M, Parca L, Ausiello G, Ferrè F, Helmer-Citterich M. Discovering sequence and structure landscapes in RNA interaction motifs. Nucleic Acids Research. 47: 4958-4969. PMID 31162604 DOI: 10.1093/Nar/Gkz250 |
0.385 |
|
| 2018 |
Parca L, Ariano B, Cabibbo A, Paoletti M, Tamburrini A, Palmeri A, Ausiello G, Helmer-Citterich M. Kinome-wide identification of phosphorylation networks in Eukaryotic proteomes. Bioinformatics (Oxford, England). PMID 30016513 DOI: 10.1093/Bioinformatics/Bty545 |
0.311 |
|
| 2018 |
Pietrosanto M, Adinolfi M, Casula R, Ausiello G, Ferrè F, Helmer-Citterich M. BEAM web server: a tool for structural RNA motif discovery. Bioinformatics (Oxford, England). 34: 1058-1060. PMID 29095974 DOI: 10.1093/Bioinformatics/Btx704 |
0.318 |
|
| 2016 |
Pietrosanto M, Mattei E, Helmer-Citterich M, Ferrè F. A novel method for the identification of conserved structural patterns in RNA: From small scale to high-throughput applications. Nucleic Acids Research. 44: 8600-8609. PMID 27580722 DOI: 10.1093/Nar/Gkw750 |
0.421 |
|
| 2016 |
Ferrè F, Colantoni A, Helmer-Citterich M. Revealing protein-lncRNA interaction. Briefings in Bioinformatics. 17: 106-16. PMID 26041786 DOI: 10.1093/Bib/Bbv031 |
0.373 |
|
| 2015 |
Facchiano A, Angelini C, Bosotti R, Guffanti A, Marabotti A, Marangoni R, Pascarella S, Romano P, Zanzoni A, Helmer-Citterich M. Preface: BITS2014, the annual meeting of the Italian Society of Bioinformatics. Bmc Bioinformatics. 16: S1. PMID 26050789 DOI: 10.1186/1471-2105-16-S9-S1 |
0.638 |
|
| 2015 |
Mattei E, Pietrosanto M, Ferrè F, Helmer-Citterich M. Web-Beagle: a web server for the alignment of RNA secondary structures. Nucleic Acids Research. 43: W493-7. PMID 25977293 DOI: 10.1093/Nar/Gkv489 |
0.355 |
|
| 2015 |
Mattei E, Helmer-Citterich M, Ferrè F. A simple protocol for the inference of RNA global pairwise alignments. Methods in Molecular Biology (Clifton, N.J.). 1269: 39-47. PMID 25577371 DOI: 10.1007/978-1-4939-2291-8_3 |
0.308 |
|
| 2014 |
Palmeri A, Ferrè F, Helmer-Citterich M. Exploiting holistic approaches to model specificity in protein phosphorylation. Frontiers in Genetics. 5: 315. PMID 25324856 DOI: 10.3389/Fgene.2014.00315 |
0.401 |
|
| 2014 |
Palmeri A, Ausiello G, Ferrè F, Helmer-Citterich M, Gherardini PF. A Proteome-wide Domain-centric Perspective on Protein Phosphorylation. Molecular & Cellular Proteomics : McP. 13: 2198-212. PMID 24830415 DOI: 10.1074/Mcp.M114.039990 |
0.467 |
|
| 2014 |
Mattei E, Ausiello G, Ferrè F, Helmer-Citterich M. A novel approach to represent and compare RNA secondary structures. Nucleic Acids Research. 42: 6146-57. PMID 24753415 DOI: 10.1093/Nar/Gku283 |
0.343 |
|
| 2014 |
Tsigankov P, Gherardini PF, Helmer-Citterich M, Späth GF, Myler PJ, Zilberstein D. Regulation dynamics of Leishmania differentiation: deconvoluting signals and identifying phosphorylation trends. Molecular & Cellular Proteomics : McP. 13: 1787-99. PMID 24741111 DOI: 10.1074/Mcp.M114.037705 |
0.311 |
|
| 2013 |
Bianchi V, Colantoni A, Calderone A, Ausiello G, Ferrè F, Helmer-Citterich M. DBATE: database of alternative transcripts expression. Database : the Journal of Biological Databases and Curation. 2013: bat050. PMID 23842462 DOI: 10.1093/Database/Bat050 |
0.319 |
|
| 2013 |
Colantoni A, Bianchi V, Gherardini PF, Tomba GS, Ausiello G, Helmer-Citterich M, Ferrè F. Alternative splicing tends to avoid partial removals of protein-protein interaction sites. Bmc Genomics. 14: 379. PMID 23758645 DOI: 10.1186/1471-2164-14-379 |
0.469 |
|
| 2013 |
Bianchi V, Mangone I, Ferrè F, Helmer-Citterich M, Ausiello G. webPDBinder: a server for the identification of ligand binding sites on protein structures. Nucleic Acids Research. 41: W308-13. PMID 23737450 DOI: 10.1093/Nar/Gkt457 |
0.445 |
|
| 2013 |
Parca L, Ferré F, Ausiello G, Helmer-Citterich M. Nucleos: a web server for the identification of nucleotide-binding sites in protein structures. Nucleic Acids Research. 41: W281-5. PMID 23703207 DOI: 10.1093/Nar/Gkt390 |
0.452 |
|
| 2013 |
Tsigankov P, Gherardini PF, Helmer-Citterich M, Späth GF, Zilberstein D. Phosphoproteomic analysis of differentiating Leishmania parasites reveals a unique stage-specific phosphorylation motif. Journal of Proteome Research. 12: 3405-12. PMID 23688256 DOI: 10.1021/Pr4002492 |
0.374 |
|
| 2013 |
Leclercq O, Bartho K, Duelsner E, von Kleist L, Gherardini PF, Palmeri A, Helmer-Citterich M, Baumgart S, Späth GF. Enrichment of Leishmania donovani ATP-binding proteins using a staurosporine capture compound. Journal of Proteomics. 86: 97-104. PMID 23684787 DOI: 10.1016/J.Jprot.2013.05.002 |
0.429 |
|
| 2013 |
Tuppo L, Alessandri C, Pomponi D, Picone D, Tamburrini M, Ferrara R, Petriccione M, Mangone I, Palazzo P, Liso M, Giangrieco I, Crescenzo R, Bernardi ML, Zennaro D, Helmer-Citterich M, et al. Peamaclein - A new peach allergenic protein: Similarities, differences and misleading features compared to Pru p 3 Clinical and Experimental Allergy. 43: 128-140. PMID 23278887 DOI: 10.1111/Cea.12028 |
0.322 |
|
| 2013 |
Perfetto L, Gherardini PF, Davey NE, Diella F, Helmer-Citterich M, Cesareni G. Exploring the diversity of SPRY/B30.2-mediated interactions. Trends in Biochemical Sciences. 38: 38-46. PMID 23164942 DOI: 10.1016/J.Tibs.2012.10.001 |
0.343 |
|
| 2012 |
Parca L, Gherardini PF, Truglio M, Mangone I, Ferrè F, Helmer-Citterich M, Ausiello G. Identification of nucleotide-binding sites in protein structures: a novel approach based on nucleotide modularity. Plos One. 7: e50240. PMID 23209685 DOI: 10.1371/Journal.Pone.0050240 |
0.469 |
|
| 2012 |
Minguez P, Parca L, Diella F, Mende DR, Kumar R, Helmer-Citterich M, Gavin AC, van Noort V, Bork P. Deciphering a global network of functionally associated post-translational modifications. Molecular Systems Biology. 8: 599. PMID 22806145 DOI: 10.1038/Msb.2012.31 |
0.307 |
|
| 2012 |
Bianchi V, Gherardini PF, Helmer-Citterich M, Ausiello G. Identification of binding pockets in protein structures using a knowledge-based potential derived from local structural similarities. Bmc Bioinformatics. 13: S17. PMID 22536963 DOI: 10.7490/F1000Research.2144.1 |
0.421 |
|
| 2012 |
Palmeri A, Helmer-Citterich M, Gherardini P. Domain-context information for the improvement of phosphorylation site prediction Embnet.Journal. 18: 120. DOI: 10.14806/Ej.18.A.448 |
0.388 |
|
| 2012 |
Mangone I, Helmer-Citterich M, Ausiello G. Assessment of structure-based functional annotation methods on protein 3D models Embnet.Journal. 18: 115. DOI: 10.14806/Ej.18.A.445 |
0.47 |
|
| 2012 |
Mattei E, Gherardini P, Ausiello G, Helmer-Citterich M. A software pipeline for the discovery of variations in exome sequencing projects Embnet.Journal. 18: 103. DOI: 10.14806/Ej.18.A.434 |
0.344 |
|
| 2012 |
Bianchi V, Colantoni A, Helmer-Citterich M, Ferrè F. Role of alternative splicing in modulating protein-protein interactions Embnet.Journal. 18: 86-87. DOI: 10.14806/Ej.18.A.428 |
0.429 |
|
| 2012 |
Gherardini P, Sacco F, Paoluzi S, Saez-Rodriguez J, Helmer-Citterich M, Ragnini-Wilson A, Castagnoli L, Cesareni G. A combined computational/experimental strategy to map phosphatases on growth pathways Embnet.Journal. 18: 28. DOI: 10.14806/Ej.18.A.395 |
0.371 |
|
| 2012 |
Colantoni A, Ferrè F, Helmer-Citterich M. Alternative splicing as regulator of protein-protein interactions Embnet.Journal. 18: 35. DOI: 10.14806/Ej.18.A.383 |
0.481 |
|
| 2011 |
Palmeri A, Gherardini PF, Tsigankov P, Ausiello G, Späth GF, Zilberstein D, Helmer-Citterich M. PhosTryp: a phosphorylation site predictor specific for parasitic protozoa of the family trypanosomatidae. Bmc Genomics. 12: 614. PMID 22182631 DOI: 10.1186/1471-2164-12-614 |
0.343 |
|
| 2011 |
Parca L, Mangone I, Gherardini PF, Ausiello G, Helmer-Citterich M. Phosfinder: a web server for the identification of phosphate-binding sites on protein structures. Nucleic Acids Research. 39: W278-82. PMID 21622655 DOI: 10.1093/Nar/Gkr389 |
0.47 |
|
| 2011 |
Schmidt-Arras D, Leclercq O, Gherardini PF, Helmer-Citterich M, Faigle W, Loew D, Späth GF. Adaptation of a 2D in-gel kinase assay to trace phosphotransferase activities in the human pathogen Leishmania donovani. Journal of Proteomics. 74: 1644-51. PMID 21443974 DOI: 10.1016/J.Jprot.2011.03.024 |
0.362 |
|
| 2011 |
Via A, Diella F, Gibson TJ, Helmer-Citterich M. From sequence to structural analysis in protein phosphorylation motifs. Frontiers in Bioscience (Landmark Edition). 16: 1261-75. PMID 21196230 DOI: 10.2741/3787 |
0.407 |
|
| 2011 |
Parca L, Gherardini PF, Helmer-Citterich M, Ausiello G. Phosphate binding sites identification in protein structures. Nucleic Acids Research. 39: 1231-42. PMID 20974634 DOI: 10.1093/Nar/Gkq987 |
0.456 |
|
| 2011 |
Zanzoni A, Carbajo D, Diella F, Gherardini PF, Tramontano A, Helmer-Citterich M, Via A. Phospho3D 2.0: an enhanced database of three-dimensional structures of phosphorylation sites. Nucleic Acids Research. 39: D268-71. PMID 20965970 DOI: 10.1093/Nar/Gkq936 |
0.71 |
|
| 2010 |
Hem S, Gherardini PF, Osorio y Fortéa J, Hourdel V, Morales MA, Watanabe R, Pescher P, Kuzyk MA, Smith D, Borchers CH, Zilberstein D, Helmer-Citterich M, Namane A, Späth GF. Identification of Leishmania-specific protein phosphorylation sites by LC-ESI-MS/MS and comparative genomics analyses. Proteomics. 10: 3868-83. PMID 20960452 DOI: 10.1002/Pmic.201000305 |
0.38 |
|
| 2010 |
Gherardini PF, Ausiello G, Helmer-Citterich M. Superpose3D: a local structural comparison program that allows for user-defined structure representations. Plos One. 5: e11988. PMID 20700534 DOI: 10.1371/Journal.Pone.0011988 |
0.439 |
|
| 2010 |
Yau WL, Blisnick T, Taly JF, Helmer-Citterich M, Schiene-Fischer C, Leclercq O, Li J, Schmidt-Arras D, Morales MA, Notredame C, Romo D, Bastin P, Späth GF. Cyclosporin A treatment of Leishmania donovani reveals stage-specific functions of cyclophilins in parasite proliferation and viability. Plos Neglected Tropical Diseases. 4: e729. PMID 20614016 DOI: 10.1371/Journal.Pntd.0000729 |
0.361 |
|
| 2010 |
Gherardini PF, Ausiello G, Russell RB, Helmer-Citterich M. Modular architecture of nucleotide-binding pockets. Nucleic Acids Research. 38: 3809-16. PMID 20185567 DOI: 10.1093/Nar/Gkq090 |
0.427 |
|
| 2010 |
Gould CM, Diella F, Via A, Puntervoll P, Gemünd C, Chabanis-Davidson S, Michael S, Sayadi A, Bryne JC, Chica C, Seiler M, Davey NE, Haslam N, Weatheritt RJ, Budd A, ... ... Helmer-Citterich M, et al. ELM: the status of the 2010 eukaryotic linear motif resource. Nucleic Acids Research. 38: D167-80. PMID 19920119 DOI: 10.1093/Nar/Gkp1016 |
0.508 |
|
| 2009 |
Via A, Gould CM, Gemünd C, Gibson TJ, Helmer-Citterich M. A structure filter for the Eukaryotic Linear Motif Resource. Bmc Bioinformatics. 10: 351. PMID 19852836 DOI: 10.1186/1471-2105-10-351 |
0.493 |
|
| 2009 |
Ausiello G, Gherardini PF, Gatti E, Incani O, Helmer-Citterich M. Structural motifs recurring in different folds recognize the same ligand fragments. Bmc Bioinformatics. 10: 182. PMID 19527512 DOI: 10.1186/1471-2105-10-182 |
0.443 |
|
| 2009 |
Sternberg M, Ali SN, Helmer-Citterich M, Gherardini PF, Fleming K, Kelley LA, Wass MN. Evolution of protein structure and function Comparative Biochemistry and Physiology Part a: Molecular & Integrative Physiology. 153: S47. DOI: 10.1016/J.Cbpa.2009.04.499 |
0.444 |
|
| 2008 |
Gherardini PF, Helmer-Citterich M. Structure-based function prediction: approaches and applications. Briefings in Functional Genomics & Proteomics. 7: 291-302. PMID 18599513 DOI: 10.1093/Bfgp/Eln030 |
0.437 |
|
| 2008 |
Ausiello G, Gherardini PF, Marcatili P, Tramontano A, Via A, Helmer-Citterich M. FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures. Bmc Bioinformatics. 9: S2. PMID 18387204 DOI: 10.1186/1471-2105-9-S2-S2 |
0.5 |
|
| 2007 |
Gherardini PF, Wass MN, Helmer-Citterich M, Sternberg MJ. Convergent evolution of enzyme active sites is not a rare phenomenon. Journal of Molecular Biology. 372: 817-45. PMID 17681532 DOI: 10.1016/J.Jmb.2007.06.017 |
0.367 |
|
| 2007 |
Via A, Peluso D, Gherardini PF, de Rinaldis E, Colombo T, Ausiello G, Helmer-Citterich M. 3dLOGO: a web server for the identification, analysis and use of conserved protein substructures. Nucleic Acids Research. 35: W416-9. PMID 17488847 DOI: 10.1093/Nar/Gkm228 |
0.503 |
|
| 2007 |
Ferraro E, Peluso D, Via A, Ausiello G, Helmer-Citterich M. SH3-Hunter: discovery of SH3 domain interaction sites in proteins. Nucleic Acids Research. 35: W451-4. PMID 17485474 DOI: 10.1093/Nar/Gkm296 |
0.452 |
|
| 2007 |
Ausiello G, Peluso D, Via A, Helmer-Citterich M. Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites. Bmc Bioinformatics. 8: S24. PMID 17430569 DOI: 10.1186/1471-2105-8-S1-S24 |
0.472 |
|
| 2007 |
Via A, Gherardini PF, Ferraro E, Ausiello G, Scalia Tomba G, Helmer-Citterich M. False occurrences of functional motifs in protein sequences highlight evolutionary constraints. Bmc Bioinformatics. 8: 68. PMID 17331242 DOI: 10.1186/1471-2105-8-68 |
0.428 |
|
| 2007 |
Zanzoni A, Ausiello G, Via A, Gherardini PF, Helmer-Citterich M. Phospho3D: a database of three-dimensional structures of protein phosphorylation sites. Nucleic Acids Research. 35: D229-31. PMID 17142231 DOI: 10.1093/Nar/Gkl922 |
0.732 |
|
| 2006 |
Ferraro E, Via A, Ausiello G, Helmer-Citterich M. A novel structure-based encoding for machine-learning applied to the inference of SH3 domain specificity. Bioinformatics (Oxford, England). 22: 2333-9. PMID 16870929 DOI: 10.1093/Bioinformatics/Btl403 |
0.471 |
|
| 2005 |
Ausiello G, Via A, Helmer-Citterich M. Query3d: a new method for high-throughput analysis of functional residues in protein structures. Bmc Bioinformatics. 6: S5. PMID 16351754 DOI: 10.1186/1471-2105-6-S4-S5 |
0.468 |
|
| 2005 |
Ferraro E, Via A, Ausiello G, Helmer-Citterich M. A neural strategy for the inference of SH3 domain-peptide interaction specificity. Bmc Bioinformatics. 6: S13. PMID 16351739 DOI: 10.1186/1471-2105-6-S4-S13 |
0.396 |
|
| 2005 |
Ferrè F, Ausiello G, Zanzoni A, Helmer-Citterich M. Functional annotation by identification of local surface similarities: a novel tool for structural genomics. Bmc Bioinformatics. 6: 194. PMID 16076399 DOI: 10.1186/1471-2105-6-194 |
0.736 |
|
| 2005 |
Ausiello G, Zanzoni A, Peluso D, Via A, Helmer-Citterich M. pdbFun: mass selection and fast comparison of annotated PDB residues. Nucleic Acids Research. 33: W133-7. PMID 15980442 DOI: 10.1093/Nar/Gki499 |
0.752 |
|
| 2005 |
Via A, Zanzoni A, Helmer-Citterich M. Seq2Struct: a resource for establishing sequence-structure links. Bioinformatics (Oxford, England). 21: 551-3. PMID 15454411 DOI: 10.1093/Bioinformatics/Bti049 |
0.741 |
|
| 2004 |
Via A, Helmer-Citterich M. A structural study for the optimisation of functional motifs encoded in protein sequences. Bmc Bioinformatics. 5: 50. PMID 15119965 DOI: 10.1186/1471-2105-5-50 |
0.436 |
|
| 2004 |
Ferrè F, Ausiello G, Zanzoni A, Helmer-Citterich M. SURFACE: a database of protein surface regions for functional annotation. Nucleic Acids Research. 32: D240-4. PMID 14681403 DOI: 10.1093/Nar/Gkh054 |
0.716 |
|
| 2003 |
Ferrè F, Via A, Ausiello G, Brannetti B, Zanzoni A, Helmer-Citterich M. Development of computational tools for the inference of protein interaction specificity rules and functional annotation using structural information. Comparative and Functional Genomics. 4: 416-9. PMID 18629081 DOI: 10.1002/Cfg.304 |
0.765 |
|
| 2003 |
Brannetti B, Helmer-Citterich M. iSPOT: A web tool to infer the interaction specificity of families of protein modules. Nucleic Acids Research. 31: 3709-11. PMID 12824399 DOI: 10.1093/Nar/Gkg592 |
0.456 |
|
| 2003 |
Puntervoll P, Linding R, Gemünd C, Chabanis-Davidson S, Mattingsdal M, Cameron S, Martin DM, Ausiello G, Brannetti B, Costantini A, Ferrè F, Maselli V, Via A, Cesareni G, Diella F, ... ... Helmer-Citterich M, et al. ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins. Nucleic Acids Research. 31: 3625-30. PMID 12824381 DOI: 10.1093/Nar/Gkg545 |
0.48 |
|
| 2002 |
Zanzoni A, Montecchi-Palazzi L, Quondam M, Ausiello G, Helmer-Citterich M, Cesareni G. MINT: a Molecular INTeraction database. Febs Letters. 513: 135-40. PMID 11911893 DOI: 10.1016/S0014-5793(01)03293-8 |
0.713 |
|
| 2002 |
Politou AS, Spadaccini R, Joseph C, Brannetti B, Guerrini R, Helmer-Citterich M, Salvadori S, Temussi PA, Pastore A. The SH3 domain of nebulin binds selectively to type II peptides: theoretical prediction and experimental validation. Journal of Molecular Biology. 316: 305-15. PMID 11851340 DOI: 10.1006/Jmbi.2001.5312 |
0.371 |
|
| 2001 |
Brannetti B, Zanzoni A, Montecchi-Palazzi L, Cesareni G, Helmer-Citterich M. iSPOT: a web tool for the analysis and recognition of protein domain specificity. Comparative and Functional Genomics. 2: 314-8. PMID 18629248 DOI: 10.1002/Cfg.104 |
0.72 |
|
| 2000 |
Via A, Ferrè F, Brannetti B, Helmer-Citterich M. Protein surface similarities: a survey of methods to describe and compare protein surfaces Cellular and Molecular Life Sciences. 57: 1970-1977. PMID 11215522 DOI: 10.1007/Pl00000677 |
0.468 |
|
| 2000 |
Via A, Ferrè F, Brannetti B, Valencia A, Helmer-Citterich M. Three-dimensional view of the surface motif associated with the P-loop structure: cis and trans cases of convergent evolution. Journal of Molecular Biology. 303: 455-65. PMID 11054283 DOI: 10.1006/Jmbi.2000.4151 |
0.479 |
|
| 2000 |
Brannetti B, Via A, Cestra G, Cesareni G, Helmer-Citterich M. SH3-SPOT: an algorithm to predict preferred ligands to different members of the SH3 gene family. Journal of Molecular Biology. 298: 313-28. PMID 10764600 DOI: 10.1006/jmbi.2000.3670 |
0.338 |
|
| 2000 |
Citarella F, Velthuis Ht, Helmer-Citterich M, Hack CE. Identification of a putative binding site for negatively charged surfaces in the fibronectin type II domain of human factor XII--an immunochemical and homology modeling approach. Thrombosis and Haemostasis. 84: 1057-1065. DOI: 10.1055/S-0037-1614171 |
0.375 |
|
| 1998 |
de Rinaldis M, Ausiello G, Cesareni G, Helmer-Citterich M. Three-dimensional profiles: a new tool to identify protein surface similarities. Journal of Molecular Biology. 284: 1211-21. PMID 9837739 DOI: 10.1006/Jmbi.1998.2248 |
0.491 |
|
| 1998 |
Soucek L, Helmer-Citterich M, Sacco A, Jucker R, Cesareni G, Nasi S. Design and properties of a Myc derivative that efficiently homodimerizes. Oncogene. 17: 2463-72. PMID 9824157 DOI: 10.1038/Sj.Onc.1202199 |
0.429 |
|
| 1998 |
Murali R, Helmer-Citterich M, Sharkey DJ, Scalice ER, Daiss JL, Sullivan MA. Structural studies on an inhibitory antibody against Thermus aquaticus DNA polymerase suggest mode of inhibition. Protein Engineering. 11: 79-86. PMID 9605541 DOI: 10.1093/Protein/11.2.79 |
0.347 |
|
| 1997 |
Quondam M, Barbato C, Pickford A, Helmer-Citterich M, Macino G. Homology modeling of Neurospora crassa geranylgeranyl pyrophosphate synthase: structural interpretation of mutant phenotypes. Protein Engineering. 10: 1047-1055. PMID 9464568 DOI: 10.1093/Protein/10.9.1047 |
0.371 |
|
| 1997 |
Pazos F, Helmer-Citterich M, Ausiello G, Valencia A. Correlated mutations contain information about protein-protein interaction. Journal of Molecular Biology. 271: 511-23. PMID 9281423 DOI: 10.1006/Jmbi.1997.1198 |
0.486 |
|
| 1997 |
Ausiello G, Cesareni G, Helmer-Citterich M. ESCHER: a new docking procedure applied to the reconstruction of protein tertiary structure. Proteins. 28: 556-67. PMID 9261871 DOI: 10.1002/(Sici)1097-0134(199708)28:4<556::Aid-Prot9>3.0.Co;2-7 |
0.437 |
|
| 1996 |
Zappavigna V, Falciola L, Helmer-Citterich M, Mavilio F, Bianchi ME. HMG1 interacts with HOX proteins and enhances their DNA binding and transcriptional activation The Embo Journal. 15: 4981-4991. DOI: 10.1002/J.1460-2075.1996.Tb00878.X |
0.407 |
|
| 1995 |
Helmer-Citterich M, Rovida E, Luzzago A, Tramontano A. Modelling Antibody-Antigen Interactions : Ferritin As A Case Study Molecular Immunology. 32: 1001-1010. PMID 7476997 DOI: 10.1016/0161-5890(95)00027-C |
0.313 |
|
| 1994 |
Helmer-Citterich M, Tramontano A. PUZZLE: a new method for automated protein docking based on surface shape complementarity. Journal of Molecular Biology. 235: 1021-31. PMID 7507171 DOI: 10.1006/Jmbi.1994.1054 |
0.395 |
|
| 1988 |
Helmer-Citterich M, Anceschi MM, Banner DW, Cesareni G. Control of ColE1 replication: low affinity specific binding of Rop (Rom) to RNAI and RNAII. The Embo Journal. 7: 557-566. DOI: 10.1002/J.1460-2075.1988.Tb02845.X |
0.342 |
|
| 1983 |
Helmer-Citterich M, Morelli G, Macino G. Nucleotide sequence and intron structure of the apocytochrome b gene of Neurospora crassa mitochondria. The Embo Journal. 2: 1235-1242. DOI: 10.1002/J.1460-2075.1983.Tb01575.X |
0.38 |
|
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