Xiao-Ou Zhang - Publications

Affiliations: 
2011-2016 CAS-MPG Partner Institute for Computation Biology, CAS 
 2016- University of Massachusetts Medical School, USA 
Area:
Computational biology, Long noncoding RNAs, Circular RNAs, Alternative Splicing, Transcriptional Regulation

14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhang XO, Gingeras TR, Weng Z. Genome-wide analysis of polymerase III-transcribed elements suggests cell-type-specific enhancer function. Genome Research. PMID 31413151 DOI: 10.1101/gr.249789.119  0.56
2019 Kwan SY, Sheel A, Song CQ, Zhang XO, Jiang T, Dang H, Cao Y, Ozata DM, Mou H, Yin H, Weng Z, Wang XW, Xue W. Depletion of TRRAP induces p53-independent senescence in liver cancer by downregulating mitotic genes. Hepatology (Baltimore, Md.). PMID 31188495 DOI: 10.1002/hep.30807  0.56
2018 Zhang G, Tu S, Yu T, Zhang XO, Parhad SS, Weng Z, Theurkauf WE. Co-dependent Assembly of Drosophila piRNA Precursor Complexes and piRNA Cluster Heterochromatin. Cell Reports. 24: 3413-3422.e4. PMID 30257203 DOI: 10.1016/j.celrep.2018.08.081  0.56
2018 Zhang XO, Fu Y, Mou H, Xue W, Weng Z. The temporal landscape of recursive splicing during Pol II transcription elongation in human cells. Plos Genetics. 14: e1007579. PMID 30148885 DOI: 10.1371/journal.pgen.1007579  0.56
2017 Mou H, Smith JL, Peng L, Yin H, Moore J, Zhang XO, Song CQ, Sheel A, Wu Q, Ozata DM, Li Y, Anderson DG, Emerson CP, Sontheimer EJ, Moore MJ, et al. CRISPR/Cas9-mediated genome editing induces exon skipping by alternative splicing or exon deletion. Genome Biology. 18: 108. PMID 28615073 DOI: 10.1186/s13059-017-1237-8  0.56
2016 Zhang XO, Dong R, Zhang Y, Zhang JL, Luo Z, Zhang J, Chen LL, Yang L. Diverse alternative back-splicing and alternative splicing landscape of circular RNAs. Genome Research. PMID 27365365 DOI: 10.1101/gr.202895.115  0.32
2016 Dong R, Zhang XO, Zhang Y, Ma XK, Chen LL, Yang L. CircRNA-derived pseudogenes. Cell Research. PMID 27021280 DOI: 10.1038/cr.2016.42  0.6
2015 Chen T, Xiang JF, Zhu S, Chen S, Yin QF, Zhang XO, Zhang J, Feng H, Dong R, Li XJ, Yang L, Chen LL. ADAR1 is required for differentiation and neural induction by regulating microRNA processing in a catalytically independent manner. Cell Research. 25: 459-76. PMID 25708366 DOI: 10.1038/cr.2015.24  0.44
2014 Zhang XO, Yin QF, Chen LL, Yang L. Gene expression profiling of non-polyadenylated RNA-seq across species. Genomics Data. 2: 237-41. PMID 26484100 DOI: 10.1016/j.gdata.2014.07.005  0.6
2014 Zhang XO, Wang HB, Zhang Y, Lu X, Chen LL, Yang L. Complementary sequence-mediated exon circularization. Cell. 159: 134-47. PMID 25242744 DOI: 10.1016/j.cell.2014.09.001  0.6
2014 Zhang XO, Yin QF, Wang HB, Zhang Y, Chen T, Zheng P, Lu X, Chen LL, Yang L. Species-specific alternative splicing leads to unique expression of sno-lncRNAs. Bmc Genomics. 15: 287. PMID 24734784 DOI: 10.1186/1471-2164-15-287  0.6
2014 Xiang JF, Yin QF, Chen T, Zhang Y, Zhang XO, Wu Z, Zhang S, Wang HB, Ge J, Lu X, Yang L, Chen LL. Human colorectal cancer-specific CCAT1-L lncRNA regulates long-range chromatin interactions at the MYC locus. Cell Research. 24: 513-31. PMID 24662484 DOI: 10.1038/cr.2014.35  0.6
2013 Zhu S, Zhang XO, Yang L. Panning for Long Noncoding RNAs. Biomolecules. 3: 226-41. PMID 24970166 DOI: 10.3390/biom3010226  0.6
2013 Zhang Y, Zhang XO, Chen T, Xiang JF, Yin QF, Xing YH, Zhu S, Yang L, Chen LL. Circular intronic long noncoding RNAs. Molecular Cell. 51: 792-806. PMID 24035497 DOI: 10.1016/j.molcel.2013.08.017  0.6
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