Shannon J Sirk - Publications

Affiliations: 
2018 Stanford University, Palo Alto, CA 
 2018- University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Area:
protein engineering, antibodies, and genome editing
Website:
https://bioengineering.illinois.edu/directory/profile/sirk

18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Kelly VW, Sirk SJ. Short FcRn-Binding Peptides Enable Salvage and Transcytosis of scFv Antibody Fragments. Acs Chemical Biology. PMID 35050570 DOI: 10.1021/acschembio.1c00862  0.303
2020 Liou CS, Sirk SJ, Diaz CAC, Klein AP, Fischer CR, Higginbottom SK, Erez A, Donia MS, Sonnenburg JL, Sattely ES. A Metabolic Pathway for Activation of Dietary Glucosinolates by a Human Gut Symbiont. Cell. 180: 717-728.e19. PMID 32084341 DOI: 10.1016/J.Cell.2020.01.023  0.583
2018 Sirk SJ. Directed Evolution of Targeted Recombinases for Genome Engineering. Methods in Molecular Biology (Clifton, N.J.). 1867: 89-102. PMID 30155817 DOI: 10.1007/978-1-4939-8799-3_7  0.37
2016 Gaj T, Sirk SJ, Shui SL, Liu J. Genome-Editing Technologies: Principles and Applications. Cold Spring Harbor Perspectives in Biology. 8. PMID 27908936 DOI: 10.1101/Cshperspect.A023754  0.345
2014 Gaj T, Liu J, Anderson KE, Sirk SJ, Barbas CF. Protein delivery using Cys2-His2 zinc-finger domains. Acs Chemical Biology. 9: 1662-7. PMID 24936957 DOI: 10.1021/Cb500282G  0.344
2014 Gaj T, Sirk SJ, Tingle RD, Mercer AC, Wallen MC, Barbas CF. Enhancing the specificity of recombinase-mediated genome engineering through dimer interface redesign. Journal of the American Chemical Society. 136: 5047-56. PMID 24611715 DOI: 10.1021/Ja4130059  0.43
2014 Liu J, Gaj T, Patterson JT, Sirk SJ, Barbas CF. Cell-penetrating peptide-mediated delivery of TALEN proteins via bioconjugation for genome engineering. Plos One. 9: e85755. PMID 24465685 DOI: 10.1371/Journal.Pone.0085755  0.612
2014 Sirk SJ, Gaj T, Jonsson A, Mercer AC, Barbas CF. Expanding the zinc-finger recombinase repertoire: directed evolution and mutational analysis of serine recombinase specificity determinants. Nucleic Acids Research. 42: 4755-66. PMID 24452803 DOI: 10.1093/Nar/Gkt1389  0.403
2014 Mercer AC, Gaj T, Sirk SJ, Lamb BM, Barbas CF. Regulation of endogenous human gene expression by ligand-inducible TALE transcription factors. Acs Synthetic Biology. 3: 723-30. PMID 24251925 DOI: 10.1021/Sb400114P  0.302
2014 Gaj T, Sirk SJ, Barbas CF. Expanding the scope of site-specific recombinases for genetic and metabolic engineering. Biotechnology and Bioengineering. 111: 1-15. PMID 23982993 DOI: 10.1002/Bit.25096  0.364
2013 Gavrilyuk J, Ban H, Uehara H, Sirk SJ, Saye-Francisco K, Cuevas A, Zablowsky E, Oza A, Seaman MS, Burton DR, Barbas CF. Antibody conjugation approach enhances breadth and potency of neutralization of anti-HIV-1 antibodies and CD4-IgG. Journal of Virology. 87: 4985-93. PMID 23427154 DOI: 10.1128/Jvi.03146-12  0.599
2013 Gaj T, Mercer AC, Sirk SJ, Smith HL, Barbas CF. A comprehensive approach to zinc-finger recombinase customization enables genomic targeting in human cells. Nucleic Acids Research. 41: 3937-46. PMID 23393187 DOI: 10.1093/Nar/Gkt071  0.374
2012 Gaj T, Guo J, Kato Y, Sirk SJ, Barbas CF. Targeted gene knockout by direct delivery of zinc-finger nuclease proteins. Nature Methods. 9: 805-7. PMID 22751204 DOI: 10.1038/Nmeth.2030  0.388
2012 Olafsen T, Sirk SJ, Olma S, Shen CK, Wu AM. ImmunoPET using engineered antibody fragments: fluorine-18 labeled diabodies for same-day imaging. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. 33: 669-77. PMID 22392499 DOI: 10.1007/S13277-012-0365-8  0.567
2011 Liu K, Lepin EJ, Wang MW, Guo F, Lin WY, Chen YC, Sirk SJ, Olma S, Phelps ME, Zhao XZ, Tseng HR, Michael van Dam R, Wu AM, Shen CK. Microfluidic-based 18F-labeling of biomolecules for immuno-positron emission tomography. Molecular Imaging. 10: 168-76, 1-7. PMID 21496447 DOI: 10.2310/7290.2010.00043  0.511
2010 Olafsen T, Sirk SJ, Betting DJ, Kenanova VE, Bauer KB, Ladno W, Raubitschek AA, Timmerman JM, Wu AM. ImmunoPET imaging of B-cell lymphoma using 124I-anti-CD20 scFv dimers (diabodies). Protein Engineering, Design & Selection : Peds. 23: 243-9. PMID 20053640 DOI: 10.1093/Protein/Gzp081  0.547
2009 Barat B, Sirk SJ, McCabe KE, Li J, Lepin EJ, Remenyi R, Koh AL, Olafsen T, Gambhir SS, Weiss S, Wu AM. Cys-diabody quantum dot conjugates (immunoQdots) for cancer marker detection. Bioconjugate Chemistry. 20: 1474-81. PMID 19642689 DOI: 10.1021/Bc800421F  0.566
2008 Sirk SJ, Olafsen T, Barat B, Bauer KB, Wu AM. Site-specific, thiol-mediated conjugation of fluorescent probes to cysteine-modified diabodies targeting CD20 or HER2. Bioconjugate Chemistry. 19: 2527-34. PMID 19053310 DOI: 10.1021/Bc800113V  0.563
Show low-probability matches.