Year |
Citation |
Score |
2009 |
Bernsel A, Viklund H, Hennerdal A, Elofsson A. TOPCONS: consensus prediction of membrane protein topology. Nucleic Acids Research. 37: W465-8. PMID 19429891 DOI: 10.1093/Nar/Gkp363 |
0.687 |
|
2008 |
Viklund H, Bernsel A, Skwark M, Elofsson A. SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology. Bioinformatics (Oxford, England). 24: 2928-9. PMID 18945683 DOI: 10.1093/Bioinformatics/Btn550 |
0.723 |
|
2008 |
Bernsel A, Viklund H, Falk J, Lindahl E, von Heijne G, Elofsson A. Prediction of membrane-protein topology from first principles. Proceedings of the National Academy of Sciences of the United States of America. 105: 7177-81. PMID 18477697 DOI: 10.1073/Pnas.0711151105 |
0.813 |
|
2008 |
Viklund H, Elofsson A. OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar. Bioinformatics (Oxford, England). 24: 1662-8. PMID 18474507 DOI: 10.1093/Bioinformatics/Btn221 |
0.779 |
|
2008 |
Papaloukas C, Granseth E, Viklund H, Elofsson A. Estimating the length of transmembrane helices using Z-coordinate predictions. Protein Science : a Publication of the Protein Society. 17: 271-8. PMID 18096645 DOI: 10.1110/Ps.073036108 |
0.803 |
|
2008 |
Bernsel A, Viklund H, Elofsson A. Remote homology detection of integral membrane proteins using conserved sequence features. Proteins. 71: 1387-99. PMID 18076048 DOI: 10.1002/Prot.21825 |
0.783 |
|
2006 |
Granseth E, Viklund H, Elofsson A. ZPRED: predicting the distance to the membrane center for residues in alpha-helical membrane proteins. Bioinformatics (Oxford, England). 22: e191-6. PMID 16873471 DOI: 10.1093/Bioinformatics/Btl206 |
0.805 |
|
2006 |
Viklund H, Granseth E, Elofsson A. Structural classification and prediction of reentrant regions in alpha-helical transmembrane proteins: application to complete genomes. Journal of Molecular Biology. 361: 591-603. PMID 16860824 DOI: 10.1016/J.Jmb.2006.06.037 |
0.765 |
|
2006 |
Amico M, Finelli M, Rossi I, Zauli A, Elofsson A, Viklund H, von Heijne G, Jones D, Krogh A, Fariselli P, Luigi Martelli P, Casadio R. PONGO: a web server for multiple predictions of all-alpha transmembrane proteins. Nucleic Acids Research. 34: W169-72. PMID 16844984 DOI: 10.1093/Nar/Gkl208 |
0.744 |
|
2004 |
Viklund H, Elofsson A. Best alpha-helical transmembrane protein topology predictions are achieved using hidden Markov models and evolutionary information. Protein Science : a Publication of the Protein Society. 13: 1908-17. PMID 15215532 DOI: 10.1110/Ps.04625404 |
0.792 |
|
Show low-probability matches. |