Xiao Li, Ph.D. - Publications

Affiliations: 
University of California, San Diego, La Jolla, CA 
Area:
Functional Genomics, RNA Biology, Developmental Biology
Website:
https://scholar.google.com/citations?user=QYRWxw4AAAAJ&hl=en

27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Pasterczyk KR, Li XL, Singh R, Zibitt MS, Hartford CCR, Pongor L, Jenkins LM, Hu Y, Zhao PX, Muys BR, Kumar S, Roper N, Aladjem MI, Pommier Y, Grammatikakis I, et al. Staufen1 Represses the FOXA1-Regulated Transcriptome by Destabilizing FOXA1 mRNA in Colorectal Cancer Cells. Molecular and Cellular Biology. 1-14. PMID 38347726 DOI: 10.1080/10985549.2024.2307574  0.306
2024 Fang Y, Guo D, Wang Y, Wang N, Fang X, Zhang Y, Li X, Chen L, Yu D, Zhang B, Qin G. Rice transcriptional repressor OsTIE1 controls anther dehiscence and male sterility by regulating JA biosynthesis. The Plant Cell. PMID 38299434 DOI: 10.1093/plcell/koae028  0.311
2022 Eliason S, Su D, Pinho F, Sun Z, Zhang Z, Li X, Sweat M, Venugopalan SR, He B, Bustin M, Amendt BA. HMGN2 represses gene transcription via interaction with transcription factors Lef-1 and Pitx2 during amelogenesis. The Journal of Biological Chemistry. 102295. PMID 35872015 DOI: 10.1016/j.jbc.2022.102295  0.656
2020 Hao Y, Wang D, Wu S, Li X, Shao C, Zhang P, Chen JY, Lim DH, Fu XD, Chen R, He S. Active retrotransposons help maintain pericentromeric heterochromatin required for faithful cell division. Genome Research. PMID 33060173 DOI: 10.1101/gr.256131.119  0.652
2020 Zhou B, Li X, Luo D, Lim DH, Zhou Y, Fu XD. Author Correction: GRID-seq for comprehensive analysis of global RNA-chromatin interactions. Nature Protocols. PMID 32060493 DOI: 10.1038/S41596-020-0308-6  0.641
2019 Li X, Fu XD. Author Correction: Chromatin-associated RNAs as facilitators of functional genomic interactions. Nature Reviews. Genetics. PMID 31273305 DOI: 10.1038/S41576-019-0155-X  0.506
2019 Zhou B, Li X, Luo D, Lim DH, Zhou Y, Fu XD. GRID-seq for comprehensive analysis of global RNA-chromatin interactions. Nature Protocols. PMID 31175345 DOI: 10.1038/S41596-019-0172-4  0.653
2019 Li X, Fu XD. Chromatin-associated RNAs as facilitators of functional genomic interactions. Nature Reviews. Genetics. PMID 31160792 DOI: 10.1038/S41576-019-0135-1  0.549
2019 Kousa YA, Zhu H, Fakhouri WD, Lei Y, Kinoshita A, Roushangar RR, Patel NK, Agopian AJ, Yang W, Leslie EJ, Busch TD, Mansour TA, Li X, Smith AL, Li EB, et al. The TFAP2A-IRF6-GRHL3 genetic pathway is conserved in neurulation. Human Molecular Genetics. PMID 30689861 DOI: 10.1093/Hmg/Ddz010  0.6
2017 Li X, Zhou B, Chen L, Gou LT, Li H, Fu XD. GRID-seq reveals the global RNA-chromatin interactome. Nature Biotechnology. PMID 28922346 DOI: 10.1038/Nbt.3968  0.541
2017 Yu W, Li X, Eliason S, Romero-Bustillos M, Ries RJ, Cao H, Amendt BA. Irx1 regulates dental outer enamel epithelial and lung alveolar type II epithelial differentiation. Developmental Biology. PMID 28746823 DOI: 10.1016/J.Ydbio.2017.07.011  0.691
2016 Jiang P, Ma DF, Jiang YH, Yang JL, Xu XD, Wang X, Lin HQ, Li X. [Preventive Effect of Different Compatibilities of Ramulus Cinnamomi and Radix Paeomlae alba in Guizhi Decoction on Cardiac Sympathetic Denervation Induced by 6-OHDA]. Zhongguo Zhong Xi Yi Jie He Za Zhi Zhongguo Zhongxiyi Jiehe Zazhi = Chinese Journal of Integrated Traditional and Western Medicine / Zhongguo Zhong Xi Yi Jie He Xue Hui, Zhongguo Zhong Yi Yan Jiu Yuan Zhu Ban. 36: 608-13. PMID 27386656  0.361
2016 Cao H, Yu W, Li X, Wang J, Gao S, Holton NE, Eliason S, Sharp T, Amendt BA. A new plasmid-based microRNA inhibitor system that inhibits microRNA families in transgenic mice and cells: A potential new therapeutic reagent. Gene Therapy. PMID 26934100 DOI: 10.1038/Gt.2016.22  0.601
2015 Li X, Yang JL, Ma DF, Lin HQ, Xu XD, Jiang Yue H. [Effects of Different Compatibilities of Ramulus Cinnamomi and Peony in Guizhi Decoction on Diabetic Cardiac Autonomic Neuropathy]. Zhongguo Zhong Xi Yi Jie He Za Zhi Zhongguo Zhongxiyi Jiehe Zazhi = Chinese Journal of Integrated Traditional and Western Medicine / Zhongguo Zhong Xi Yi Jie He Xue Hui, Zhongguo Zhong Yi Yan Jiu Yuan Zhu Ban. 35: 741-5. PMID 26242130  0.341
2015 Lidral AC, Liu H, Bullard SA, Bonde G, Machida J, Visel A, Uribe LM, Li X, Amendt B, Cornell RA. A single nucleotide polymorphism associated with isolated cleft lip and palate, thyroid cancer and hypothyroidism alters the activity of an oral epithelium and thyroid enhancer near FOXE1. Human Molecular Genetics. 24: 3895-907. PMID 25652407 DOI: 10.1093/Hmg/Ddv047  0.597
2015 Gao S, Moreno M, Eliason S, Cao H, Li X, Yu W, Bidlack FB, Margolis HC, Baldini A, Amendt BA. TBX1 protein interactions and microRNA-96-5p regulation controls cell proliferation during craniofacial and dental development: implications for 22q11.2 deletion syndrome. Human Molecular Genetics. 24: 2330-48. PMID 25556186 DOI: 10.1093/Hmg/Ddu750  0.725
2014 Sharp T, Wang J, Li X, Cao H, Gao S, Moreno M, Amendt BA. A pituitary homeobox 2 (Pitx2):microRNA-200a-3p:β-catenin pathway converts mesenchymal cells to amelogenin-expressing dental epithelial cells. The Journal of Biological Chemistry. 289: 27327-41. PMID 25122764 DOI: 10.1074/Jbc.M114.575654  0.633
2014 Zhang Z, Kim K, Li X, Moreno M, Sharp T, Goodheart MJ, Safe S, Dupuy AJ, Amendt BA. MicroRNA-26b represses colon cancer cell proliferation by inhibiting lymphoid enhancer factor 1 expression. Molecular Cancer Therapeutics. 13: 1942-51. PMID 24785257 DOI: 10.1158/1535-7163.Mct-13-1000  0.62
2014 Li X, Venugopalan SR, Cao H, Pinho FO, Paine ML, Snead ML, Semina EV, Amendt BA. A model for the molecular underpinnings of tooth defects in Axenfeld-Rieger syndrome. Human Molecular Genetics. 23: 194-208. PMID 23975681 DOI: 10.1093/Hmg/Ddt411  0.643
2013 Gao S, Li X, Amendt BA. Understanding the role of Tbx1 as a candidate gene for 22q11.2 deletion syndrome. Current Allergy and Asthma Reports. 13: 613-21. PMID 23996541 DOI: 10.1007/S11882-013-0384-6  0.614
2013 Cao H, Jheon A, Li X, Sun Z, Wang J, Florez S, Zhang Z, McManus MT, Klein OD, Amendt BA. The Pitx2:miR-200c/141:noggin pathway regulates Bmp signaling and ameloblast differentiation. Development (Cambridge, England). 140: 3348-59. PMID 23863486 DOI: 10.1242/Dev.089193  0.623
2013 Wang J, Sun Z, Zhang Z, Saadi I, Wang J, Li X, Gao S, Engle JJ, Kuburas A, Fu X, Yu W, Klein WH, Russo AF, Amendt BA. Protein inhibitors of activated STAT (Pias1 and Piasy) differentially regulate pituitary homeobox 2 (PITX2) transcriptional activity. The Journal of Biological Chemistry. 288: 12580-95. PMID 23515314 DOI: 10.1074/Jbc.M112.374561  0.703
2013 Li X, Florez S, Wang J, Cao H, Amendt BA. Dact2 represses PITX2 transcriptional activation and cell proliferation through Wnt/beta-catenin signaling during odontogenesis. Plos One. 8: e54868. PMID 23349981 DOI: 10.1371/Journal.Pone.0054868  0.643
2013 Zhang Z, Gutierrez D, Li X, Bidlack F, Cao H, Wang J, Andrade K, Margolis HC, Amendt BA. The LIM homeodomain transcription factor LHX6: a transcriptional repressor that interacts with pituitary homeobox 2 (PITX2) to regulate odontogenesis. The Journal of Biological Chemistry. 288: 2485-500. PMID 23229549 DOI: 10.1074/Jbc.M112.402933  0.682
2012 Jumlongras D, Lachke SA, O'Connell DJ, Aboukhalil A, Li X, Choe SE, Ho JW, Turbe-Doan A, Robertson EA, Olsen BR, Bulyk ML, Amendt BA, Maas RL. An evolutionarily conserved enhancer regulates Bmp4 expression in developing incisor and limb bud. Plos One. 7: e38568. PMID 22701669 DOI: 10.1371/Journal.Pone.0038568  0.657
2011 Venugopalan SR, Li X, Amen MA, Florez S, Gutierrez D, Cao H, Wang J, Amendt BA. Hierarchical interactions of homeodomain and forkhead transcription factors in regulating odontogenic gene expression. The Journal of Biological Chemistry. 286: 21372-83. PMID 21504905 DOI: 10.1074/Jbc.M111.252031  0.669
2010 Cao H, Wang J, Li X, Florez S, Huang Z, Venugopalan SR, Elangovan S, Skobe Z, Margolis HC, Martin JF, Amendt BA. MicroRNAs play a critical role in tooth development. Journal of Dental Research. 89: 779-84. PMID 20505045 DOI: 10.1177/0022034510369304  0.637
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