Peter Chovanec - Publications

Affiliations: 
2020- University of California, Los Angeles, Los Angeles, CA 

2/19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Quinodoz SA, Bhat P, Chovanec P, Jachowicz JW, Ollikainen N, Detmar E, Soehalim E, Guttman M. SPRITE: a genome-wide method for mapping higher-order 3D interactions in the nucleus using combinatorial split-and-pool barcoding. Nature Protocols. 17: 36-75. PMID 35013617 DOI: 10.1038/s41596-021-00633-y  0.335
2018 Chovanec P, Bolland DJ, Matheson LS, Wood AL, Krueger F, Andrews S, Corcoran AE. Unbiased quantification of immunoglobulin diversity at the DNA level with VDJ-seq. Nature Protocols. 13: 1232-1252. PMID 29725123 DOI: 10.1038/nprot.2018.021  0.334
Low-probability matches (unlikely to be authored by this person)
2018 Koohy H, Bolland DJ, Matheson LS, Schoenfelder S, Stellato C, Dimond A, Várnai C, Chovanec P, Chessa T, Denizot J, Manzano Garcia R, Wingett SW, Freire-Pritchett P, Nagano T, Hawkins P, et al. Genome organization and chromatin analysis identify transcriptional downregulation of insulin-like growth factor signaling as a hallmark of aging in developing B cells. Genome Biology. 19: 126. PMID 30180872 DOI: 10.1186/s13059-018-1489-y  0.271
2017 Collier AJ, Panula SP, Schell JP, Chovanec P, Plaza Reyes A, Petropoulos S, Corcoran AE, Walker R, Douagi I, Lanner F, Rugg-Gunn PJ. Comprehensive Cell Surface Protein Profiling Identifies Specific Markers of Human Naive and Primed Pluripotent States. Cell Stem Cell. PMID 28343983 DOI: 10.1016/j.stem.2017.02.014  0.211
2017 Matheson LS, Bolland DJ, Chovanec P, Krueger F, Andrews S, Koohy H, Corcoran AE. Local Chromatin Features Including PU.1 and IKAROS Binding and H3K4 Methylation Shape the Repertoire of Immunoglobulin Kappa Genes Chosen for V(D)J Recombination. Frontiers in Immunology. 8: 1550. PMID 29204143 DOI: 10.3389/fimmu.2017.01550  0.21
2011 Maddalo G, Chovanec P, Stenberg-Bruzell F, Nielsen HV, Jensen-Seaman MI, Ilag LL, Kline KA, Daley DO. A reference map of the membrane proteome of Enterococcus faecalis. Proteomics. 11: 3935-41. PMID 21800426 DOI: 10.1002/Pmic.201100103  0.204
2011 Maddalo G, Stenberg-Bruzell F, Götzke H, Toddo S, Björkholm P, Eriksson H, Chovanec P, Genevaux P, Lehtiö J, Ilag LL, Daley DO. Systematic analysis of native membrane protein complexes in Escherichia coli. Journal of Proteome Research. 10: 1848-59. PMID 21210718 DOI: 10.1021/Pr101105C  0.184
2009 Richey C, Chovanec P, Hoeft SE, Oremland RS, Basu P, Stolz JF. Respiratory arsenate reductase as a bidirectional enzyme. Biochemical and Biophysical Research Communications. 382: 298-302. PMID 19285953 DOI: 10.1016/J.Bbrc.2009.03.045  0.157
2014 Thomas JA, Chovanec P, Stolz JF, Basu P. Mapping the protein profile involved in the biotransformation of organoarsenicals using an arsenic metabolizing bacterium. Metallomics : Integrated Biometal Science. 6: 1958-69. PMID 25142266 DOI: 10.1039/C4Mt00185K  0.14
2016 Bolland DJ, Koohy H, Wood AL, Matheson LS, Krueger F, Stubbington MJ, Baizan-Edge A, Chovanec P, Stubbs BA, Tabbada K, Andrews SR, Spivakov M, Corcoran AE. Two Mutually Exclusive Local Chromatin States Drive Efficient V(D)J Recombination. Cell Reports. PMID 27264181 DOI: 10.1016/j.celrep.2016.05.020  0.131
2021 Chovanec P, Collier AJ, Krueger C, Várnai C, Semprich CI, Schoenfelder S, Corcoran AE, Rugg-Gunn PJ. Widespread reorganisation of pluripotent factor binding and gene regulatory interactions between human pluripotent states. Nature Communications. 12: 2098. PMID 33828098 DOI: 10.1038/s41467-021-22201-4  0.128
2021 Chovanec P, Yin Y. A mapping platform for mitotic crossover by single-cell multi-omics. Methods in Enzymology. 661: 183-204. PMID 34776212 DOI: 10.1016/bs.mie.2021.08.017  0.113
2021 Quinodoz SA, Jachowicz JW, Bhat P, Ollikainen N, Banerjee AK, Goronzy IN, Blanco MR, Chovanec P, Chow A, Markaki Y, Thai J, Plath K, Guttman M. RNA promotes the formation of spatial compartments in the nucleus. Cell. 184: 5775-5790.e30. PMID 34739832 DOI: 10.1016/j.cell.2021.10.014  0.111
2005 Stenberg F, Chovanec P, Maslen SL, Robinson CV, Ilag LL, von Heijne G, Daley DO. Protein complexes of the Escherichia coli cell envelope. The Journal of Biological Chemistry. 280: 34409-19. PMID 16079137 DOI: 10.1074/jbc.M506479200  0.111
2012 Chovanec P, Sparacino-Watkins C, Zhang N, Basu P, Stolz JF. Microbial reduction of chromate in the presence of nitrate by three nitrate respiring organisms. Frontiers in Microbiology. 3: 416. PMID 23251135 DOI: 10.3389/Fmicb.2012.00416  0.088
2019 Teng Y, Young JL, Edwards B, Hayes P, Thompson L, Johnston C, Edwards C, Sanders Y, Writer M, Pinto D, Zhang Y, Roode M, Chovanec P, Matheson L, Corcoran AE, et al. Diverse Human V antibody fragments with bio-therapeutic properties from the Crescendo Mouse. New Biotechnology. PMID 31600579 DOI: 10.1016/j.nbt.2019.10.003  0.085
2010 Chovanec P, Stolz JF, Basu P. A proteome investigation of roxarsone degradation by Alkaliphilus oremlandii strain OhILAs. Metallomics : Integrated Biometal Science. 2: 133-9. PMID 21069144 DOI: 10.1039/B915479E  0.053
2005 Chovanec P, Kalinák M, Liptaj T, Pronayová N, Jakubík T, Hudecová D, Varecka L. Study of Trichoderma viride metabolism under conditions of the restriction of oxidative processes. Canadian Journal of Microbiology. 51: 853-62. PMID 16333345 DOI: 10.1139/w05-075  0.05
2007 Simkovic M, Ditte P, Chovanec P, Varecka L, Lakatos B. Changes in growth competence of aged Trichoderma viride vegetative mycelia. Antonie Van Leeuwenhoek. 91: 407-16. PMID 17151955 DOI: 10.1007/s10482-006-9126-2  0.033
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