Weiqiang Qian - Related publications

Affiliations: 
Peking University, Beijing, Beijing Shi, China 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Gelvin SB. Plant DNA Repair and T-DNA Integration. International Journal of Molecular Sciences. 22. PMID 34445162 DOI: 10.3390/ijms22168458   
2021 Bennett M, Cleaves K, Hewezi T. Expression Patterns of DNA Methylation and Demethylation Genes during Plant Development and in Response to Phytohormones. International Journal of Molecular Sciences. 22. PMID 34575855 DOI: 10.3390/ijms22189681   
2021 Mahapatra K, Banerjee S, De S, Mitra M, Roy P, Roy S. An Insight Into the Mechanism of Plant Organelle Genome Maintenance and Implications of Organelle Genome in Crop Improvement: An Update. Frontiers in Cell and Developmental Biology. 9: 671698. PMID 34447743 DOI: 10.3389/fcell.2021.671698   
2021 Gong W, Zhou Y, Wang R, Wei X, Zhang L, Dai Y, Zhu Z. Analysis of T-DNA integration events in transgenic rice. Journal of Plant Physiology. 266: 153527. PMID 34563791 DOI: 10.1016/j.jplph.2021.153527   
2021 Ogunleye AJ, Romanova E, Medvedeva YA. Genome-wide regulation of CpG methylation by ecCEBPα in acute myeloid leukemia. F1000research. 10: 204. PMID 34557292 DOI: 10.12688/f1000research.28146.2   
2021 Hsu CT, Yuan YH, Lin YC, Lin S, Cheng QW, Wu FH, Sheen J, Shih MC, Lin CS. Efficient and Economical Targeted Insertion in Plant Genomes via Protoplast Regeneration. The Crispr Journal. PMID 34569819 DOI: 10.1089/crispr.2021.0045   
2021 Lee SY, Kim JJ, Miller KM. Bromodomain proteins: protectors against endogenous DNA damage and facilitators of genome integrity. Experimental & Molecular Medicine. PMID 34548613 DOI: 10.1038/s12276-021-00673-0   
2021 Zhang J, Xu C, Liu K, Li Y, Wang M, Tao L, Yu H, Zhang C. Deep Sequencing Discovery and Profiling of Known and Novel miRNAs Produced in Response to DNA Damage in Rice. International Journal of Molecular Sciences. 22. PMID 34576121 DOI: 10.3390/ijms22189958   
2021 Li Z, Tang M, Luo D, Kashif MH, Cao S, Zhang W, Hu Y, Huang Z, Yue J, Li R, Chen P. Integrated Methylome and Transcriptome Analyses Reveal the Molecular Mechanism by Which DNA Methylation Regulates Kenaf Flowering. Frontiers in Plant Science. 12: 709030. PMID 34512693 DOI: 10.3389/fpls.2021.709030   
2021 Tse DH, Becker NA, Young RT, Olson WK, Peters JP, Schwab TL, Clark KJ, Maher LJ. Designed architectural proteins that tune DNA looping in bacteria. Nucleic Acids Research. PMID 34478548 DOI: 10.1093/nar/gkab759   
2021 Xuan J, Gitareja K, Brajanovski N, Sanij E. Harnessing the Nucleolar DNA Damage Response in Cancer Therapy. Genes. 12. PMID 34440328 DOI: 10.3390/genes12081156   
2021 Parry A, Rulands S, Reik W. Active turnover of DNA methylation during cell fate decisions. Nature Reviews. Genetics. 22: 59-66. PMID 33024290 DOI: 10.1038/s41576-020-00287-8   
2021 Yan S, Song M, Ping J, Lai ST, Cao XY, Bai CJ, Xie DF, Guan H, Gao SS, Zhou PK. ZGRF1 promotes end resection of DNA homologous recombination via forming complex with BRCA1/EXO1. Cell Death Discovery. 7: 260. PMID 34552057 DOI: 10.1038/s41420-021-00633-7   
2021 Li SF, Lv CC, Lan LN, Jiang KL, Zhang YL, Li N, Deng CL, Gao WJ. DNA methylation is involved in sexual differentiation and sex chromosome evolution in the dioecious plant garden asparagus. Horticulture Research. 8: 198. PMID 34465747 DOI: 10.1038/s41438-021-00633-9   
2021 Ao C, Gao L, Yu L. Research progress in predicting DNA methylation modifications and the relation with human diseases. Current Medicinal Chemistry. PMID 34533438 DOI: 10.2174/0929867328666210917115733   
2021 Balana AT, Mukherjee A, Nagpal H, Moon SP, Fierz B, Vasquez KM, Pratt MR. O-GlcNAcylation of High Mobility Group Box 1 (HMGB1) Alters Its DNA Binding and DNA Damage Processing Activities. Journal of the American Chemical Society. PMID 34546745 DOI: 10.1021/jacs.1c06192   
2021 Dhingra N, Zhao X. Advances in SUMO-based regulation of homologous recombination. Current Opinion in Genetics & Development. 71: 114-119. PMID 34333341 DOI: 10.1016/j.gde.2021.07.007   
2021 Hu W, Wang Y, Yang B, Lin C, Yu H, Liu G, Deng Z, Ou HY, He X. Bacterial YedK represses plasmid DNA replication and transformation through its DNA single-strand binding activity. Microbiological Research. 252: 126852. PMID 34454309 DOI: 10.1016/j.micres.2021.126852   
2021 Nagarajan H, Vetrivel U. Deciphering the structural and functional impact of missense mutations in Egr1-DNA interacting interface: an integrative computational approach. Journal of Biomolecular Structure & Dynamics. 1-13. PMID 34402752 DOI: 10.1080/07391102.2021.1965030   
2021 Fujita T, Nagata S, Fujii H. Protein or ribonucleoprotein-mediated blocking of recombinase polymerase amplification enables the discrimination of nucleotide and epigenetic differences between cell populations. Communications Biology. 4: 988. PMID 34413466 DOI: 10.1038/s42003-021-02503-5   
2021 Fogg JM, Judge AK, Stricker E, Chan HL, Zechiedrich L. Supercoiling and looping promote DNA base accessibility and coordination among distant sites. Nature Communications. 12: 5683. PMID 34584096 DOI: 10.1038/s41467-021-25936-2   
2021 Meier B, Volkova NV, Wang B, González-Huici V, Bertolini S, Campbell PJ, Gerstung M, Gartner A. C. elegans genome-wide analysis reveals DNA repair pathways that act cooperatively to preserve genome integrity upon ionizing radiation. Plos One. 16: e0258269. PMID 34614038 DOI: 10.1371/journal.pone.0258269   
2021 Wang T, Lu Q, Song H, Hu N, Wei Y, Li P, Liu Y, Zhao Z, Liu J, Zhang B, Peng R. DNA Methylation and RNA-Sequencing Analysis Show Epigenetic Function During Grain Filling in Foxtail Millet ( L.). Frontiers in Plant Science. 12: 741415. PMID 34512708 DOI: 10.3389/fpls.2021.741415   
2021 Zhang Z, He C, Chen Y, Li B, Tian S. DNA Methyltransferases Regulate Pathogenicity of to Horticultural Crops. Journal of Fungi (Basel, Switzerland). 7. PMID 34436198 DOI: 10.3390/jof7080659   
2021 Pujari SS, Wu M, Thomforde J, Wang ZA, Chao C, Olson N, Erber L, Pomerantz WCK, Cole P, Tretyakova NY. Site-Specific 5-Formyl Cytosine Mediated DNA-Histone Cross-Links: Synthesis and Polymerase Bypass by Human DNA Polymerase η. Angewandte Chemie (International Ed. in English). PMID 34634172 DOI: 10.1002/anie.202109418   
2021 Yoshida K, Fujita M. DNA damage responses that enhance resilience to replication stress. Cellular and Molecular Life Sciences : Cmls. PMID 34463774 DOI: 10.1007/s00018-021-03926-3   
2021 Yamaoka K, Oikawa R, Abe N, Nakamoto K, Tomoike F, Hashiya F, Kimura Y, Abe H. Complete chemical synthesis of long DNA transcriptable in human cells. Chembiochem : a European Journal of Chemical Biology. PMID 34519401 DOI: 10.1002/cbic.202100312   
2021 Marchal L, Hamsanathan S, Karthikappallil R, Han S, Shinglot H, Gurkar AU. Analysis of representative mutants for key DNA repair pathways on healthspan in Caenorhabditis elegans. Mechanisms of Ageing and Development. 111573. PMID 34562508 DOI: 10.1016/j.mad.2021.111573   
2021 Silva GLA, Tosi LRO, McCulloch R, Black JA. Unpicking the Roles of DNA Damage Protein Kinases in Trypanosomatids. Frontiers in Cell and Developmental Biology. 9: 636615. PMID 34422791 DOI: 10.3389/fcell.2021.636615   
2021 Berger M, Wortmann L, Buchgraber P, Lücking U, Zitzmann-Kolbe S, Wengner AM, Bader B, Bömer U, Briem H, Eis K, Rehwinkel H, Bartels F, Moosmayer D, Eberspächer U, Lienau P, et al. BAY-8400: A Novel Potent and Selective DNA-PK Inhibitor which Shows Synergistic Efficacy in Combination with Targeted Alpha Therapies. Journal of Medicinal Chemistry. PMID 34428039 DOI: 10.1021/acs.jmedchem.1c00762   
2021 Lee KZ, Mechikoff MA, Kikla A, Liu A, Pandolfi P, Fitzgerald K, Gimble FS, Solomon KV. NgAgo possesses guided DNA nicking activity. Nucleic Acids Research. PMID 34478558 DOI: 10.1093/nar/gkab757   
2021 Costa PM. Current aspects of DNA damage and repair in ecotoxicology: a mini-review. Ecotoxicology (London, England). PMID 34623548 DOI: 10.1007/s10646-021-02487-2   
2021 Polleys EJ, Freudenreich CH. Homologous recombination within repetitive DNA. Current Opinion in Genetics & Development. 71: 143-153. PMID 34464817 DOI: 10.1016/j.gde.2021.08.005   
2021 Kokic G, Wagner FR, Chernev A, Urlaub H, Cramer P. Structural basis of human transcription-DNA repair coupling. Nature. PMID 34526721 DOI: 10.1038/s41586-021-03906-4   
2021 Thakur BL, Ray A, Redon CE, Aladjem MI. Preventing excess replication origin activation to ensure genome stability. Trends in Genetics : Tig. PMID 34625299 DOI: 10.1016/j.tig.2021.09.008   
2021 Sánchez-Osuna M, Cortés P, Lee M, Smith AT, Barbé J, Erill I. Non-canonical LexA proteins regulate the SOS response in the Bacteroidetes. Nucleic Acids Research. PMID 34614190 DOI: 10.1093/nar/gkab773   
2021 Yoshua SB, Watson GD, Howard JAL, Velasco-Berrelleza V, Leake MC, Noy A. Integration host factor bends and bridges DNA in a multiplicity of binding modes with varying specificity. Nucleic Acids Research. PMID 34352078 DOI: 10.1093/nar/gkab641   
2021 Ge J, Qiu X. Expression, purification, characterization of DNA binding activity and crystallization of a putative type II DNA Cytosine-5-methyltransferase from Microcystis aeruginosa. Protein Expression and Purification. 189: 105988. PMID 34634480 DOI: 10.1016/j.pep.2021.105988   
2021 Grazina L, Costa J, Amaral JS, Mafra I. High-Resolution Melting Analysis as a Tool for Plant Species Authentication. Methods in Molecular Biology (Clifton, N.J.). 2264: 55-73. PMID 33263903 DOI: 10.1007/978-1-0716-1201-9_5   
2021 Dai Y, Yuan BF, Feng YQ. Quantification and mapping of DNA modifications. Rsc Chemical Biology. 2: 1096-1114. PMID 34458826 DOI: 10.1039/d1cb00022e   
2021 Nitiss JL, Kiianitsa K, Sun Y, Nitiss KC, Maizels N. Topoisomerase Assays. Current Protocols. 1: e250. PMID 34606690 DOI: 10.1002/cpz1.250   
2021 Kunisky AK, Anyaeche VI, Herron RS, Park CY, Hwang HW. Shift in MSL1 alternative polyadenylation in response to DNA damage protects cancer cells from chemotherapeutic agent-induced apoptosis. Cell Reports. 37: 109815. PMID 34644577 DOI: 10.1016/j.celrep.2021.109815   
2021 Lo CY, Gao Y. DNA Helicase-Polymerase Coupling in Bacteriophage DNA Replication. Viruses. 13. PMID 34578319 DOI: 10.3390/v13091739   
2021 Kropp HM, Ludmann S, Diederichs K, Betz K, Marx A. Structural Basis for The Recognition of Deaminated Nucleobases by An Archaeal DNA Polymerase. Chembiochem : a European Journal of Chemical Biology. PMID 34486208 DOI: 10.1002/cbic.202100306   
2021 Richardson W, Kang GW, Lee HJ, Kwon KM, Kim S, Kim HJ. Chasing the structural diversity of the transcription regulator HigA2. Iucrj. 8: 823-832. PMID 34584743 DOI: 10.1107/S2052252521007715   
2021 Kang Z, Fu P, Alcivar AL, Fu H, Redon C, Foo TK, Zuo Y, Ye C, Baxley R, Madireddy A, Buisson R, Bielinsky AK, Zou L, Shen Z, Aladjem MI, et al. BRCA2 associates with MCM10 to suppress PRIMPOL-mediated repriming and single-stranded gap formation after DNA damage. Nature Communications. 12: 5966. PMID 34645815 DOI: 10.1038/s41467-021-26227-6   
2021 Muzzopappa F, Hertzog M, Erdel F. DNA length tunes the fluidity of DNA-based condensates. Biophysical Journal. 120: 1288-1300. PMID 33640380 DOI: 10.1016/j.bpj.2021.02.027   
2021 St Germain C, Zhao H, Barlow JH. Transcription-Replication Collisions-A Series of Unfortunate Events. Biomolecules. 11. PMID 34439915 DOI: 10.3390/biom11081249   
2021 Li J, Sun C, Lin Y, Zhi H, Fu Y, Liu Z. The interaction of proanthocyanidins with DNA molecules studied by atomic force microscopy and spectroscopic method. Ultramicroscopy. 230: 113393. PMID 34607224 DOI: 10.1016/j.ultramic.2021.113393   
2021 Kang K, Ma Y, Sadakane K. Direct visualization of local activities of long DNA strands via image-time correlation. European Biophysics Journal : Ebj. PMID 34499211 DOI: 10.1007/s00249-021-01570-0