Ke Si - Publications

Affiliations: 
2007-2010 Optical Engineering & Neuroscience Zhejiang University, Hangzhou Shi, Zhejiang Sheng, China 

45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Huang L, Chen Y, Jin S, Lin L, Duan S, Si K, Gong W, Julius Zhu J. Organizational principles of amygdalar input-output neuronal circuits. Molecular Psychiatry. PMID 34400771 DOI: 10.1038/s41380-021-01262-3  1
2021 Deng A, Zheng Y, Chen J, Zheng Y, Gong W, Si K. Improved spatial resolution using focal modulation microscopy with a Tai Chi aperture. Optics Express. 29: 18263-18276. PMID 34154085 DOI: 10.1364/OE.426600  1
2021 Hu L, Hu S, Gong W, Si K. Image enhancement for fluorescence microscopy based on deep learning with prior knowledge of aberration. Optics Letters. 46: 2055-2058. PMID 33929417 DOI: 10.1364/OL.418997  1
2021 Zheng Y, Chen J, Wu C, Gong W, Si K. Adaptive optics for structured illumination microscopy based on deep learning. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 33543823 DOI: 10.1002/cyto.a.24319  1
2021 Si K, Xue Y, Yu X, Zhu X, Li Q, Gong W, Liang T, Duan S. Fully end-to-end deep-learning-based diagnosis of pancreatic tumors. Theranostics. 11: 1982-1990. PMID 33408793 DOI: 10.7150/thno.52508  1
2020 Lin L, Gupta S, Zheng WS, Si K, Zhu JJ. Genetically encoded sensors enable micro- and nano-scopic decoding of transmission in healthy and diseased brains. Molecular Psychiatry. PMID 33277628 DOI: 10.1038/s41380-020-00960-8  0.08
2020 Hu L, Hu S, Gong W, Si K. Learning-based Shack-Hartmann wavefront sensor for high-order aberration detection: erratum. Optics Express. 28: 32132. PMID 33115176 DOI: 10.1364/OE.411191  1
2020 Xu X, Chen J, Zhang B, Huang L, Zheng Y, Si K, Duan S, Gong W. Enlarged field of view based on Schwartz modulation for light sheet fluorescence microscopy in deep tissue. Optics Letters. 45: 4851-4854. PMID 32870874 DOI: 10.1364/Ol.398985  1
2020 Jin Y, Chen J, Wu C, Chen Z, Zhang X, Shen HL, Gong W, Si K. Wavefront reconstruction based on deep transfer learning for microscopy. Optics Express. 28: 20738-20747. PMID 32680127 DOI: 10.1364/OE.396321  1
2020 Hu L, Hu S, Gong W, Si K. Deep learning assisted Shack-Hartmann wavefront sensor for direct wavefront detection. Optics Letters. 45: 3741-3744. PMID 32630943 DOI: 10.1364/OL.395579  1
2020 He C, Ali D, Xu H, Kumaravel S, Si K, Li Y, Sun B, Ma J, Xiao Z. Epithelial cell derived microvesicles: A safe delivery platform of CRISPR/Cas9 conferring synergistic anti-tumor effect with sorafenib. Experimental Cell Research. 112040. PMID 32380039 DOI: 10.1016/j.yexcr.2020.112040  1
2020 Liang G, Zhu Y, Ali DJ, Tian T, Xu H, Si K, Sun B, Chen B, Xiao Z. Engineered exosomes for targeted co-delivery of miR-21 inhibitor and chemotherapeutics to reverse drug resistance in colon cancer. Journal of Nanobiotechnology. 18: 10. PMID 31918721 DOI: 10.1186/s12951-019-0563-2  1
2019 Hu L, Hu S, Gong W, Si K. Learning-based Shack-Hartmann wavefront sensor for high-order aberration detection. Optics Express. 27: 33504-33517. PMID 31878418 DOI: 10.1364/OE.27.033504  1
2019 Hu L, Hu S, Li Y, Gong W, Si K. Reliability of wavefront shaping based on coherent optical adaptive technique in deep tissue focusing. Journal of Biophotonics. PMID 31622537 DOI: 10.1002/jbio.201900245  1
2019 Cai C, Wang X, Si K, Qian J, Luo J, Ma C. Streak artifact suppression in photoacoustic computed tomography using adaptive back projection. Biomedical Optics Express. 10: 4803-4814. PMID 31565526 DOI: 10.1364/BOE.10.004803  1
2019 Cai C, Wang X, Si K, Qian J, Luo J, Ma C. Feature coupling photoacoustic computed tomography for joint reconstruction of initial pressure and sound speed . Biomedical Optics Express. 10: 3447-3462. PMID 31467789 DOI: 10.1364/BOE.10.003447  1
2019 Wu C, Chen J, Si K, Song Y, Zhu X, Hu L, Zheng Y, Gong W. Aberration corrections of doughnut beam by adaptive optics in the turbid medium. Journal of Biophotonics. PMID 31291061 DOI: 10.1002/jbio.201900125  1
2019 Zhang Y, Wu C, Song Y, Si K, Zheng Y, Hu L, Chen J, Tang L, Gong W. Machine learning based adaptive optics for doughnut-shaped beam. Optics Express. 27: 16871-16881. PMID 31252906 DOI: 10.1364/OE.27.016871  1
2019 Zhu X, Huang L, Zheng Y, Song Y, Xu Q, Wang J, Si K, Duan S, Gong W. Ultrafast optical clearing method for three-dimensional imaging with cellular resolution. Proceedings of the National Academy of Sciences of the United States of America. PMID 31101714 DOI: 10.1073/Pnas.1819583116  1
2019 Sun C, Si K, Zheng Y, Li L, Chen S, Liu H, Duan F, Zheng Z. Phenotypes of aortic valve disease according to detailed anatomical classification of patients who underwent aortic valve replacement surgery. Cardiovascular Pathology : the Official Journal of the Society For Cardiovascular Pathology. 41: 1-7. PMID 30954907 DOI: 10.1016/j.carpath.2019.01.004  1
2018 Xu Z, Liu H, Sun C, Si K, Zhao Y, Zheng Z. Association between a Genetic Risk Score Based on Single Nucleotide Polymorphisms of Coronary Artery Disease-Related Genes and Left Main Coronary Artery Disease. Biomed Research International. 2018: 8610368. PMID 30671475 DOI: 10.1155/2018/8610368  1
2018 Sun C, Liu H, Si K, Wu Y, Zhao K, Xu R, Zhou Z, Zheng Z. Meis2 represses the osteoblastic transdifferentiation of aortic valve interstitial cells through the Notch1/Twist1 pathway. Biochemical and Biophysical Research Communications. PMID 30594396 DOI: 10.1016/j.bbrc.2018.12.040  1
2018 Jin Y, Zhang Y, Hu L, Huang H, Xu Q, Zhu X, Huang L, Zheng Y, Shen HL, Gong W, Si K. Machine learning guided rapid focusing with sensor-less aberration corrections. Optics Express. 26: 30162-30171. PMID 30469894  1
2018 Yu Y, Wang J, Ng CW, Ma Y, Mo S, Fong ELS, Xing J, Song Z, Xie Y, Si K, Wee A, Welsch RE, So PTC, Yu H. Deep learning enables automated scoring of liver fibrosis stages. Scientific Reports. 8: 16016. PMID 30375454 DOI: 10.1038/S41598-018-34300-2  1
2018 Wu W, Hou B, Tang C, Liu F, Yang J, Pan T, Si K, Lu D, Wang X, Wang J, Xiong X, Liu J, Xie C. (+)-Usnic Acid Inhibits Migration of c-KIT Positive Cells in Human Colorectal Cancer. Evidence-Based Complementary and Alternative Medicine : Ecam. 2018: 5149436. PMID 30298093 DOI: 10.1155/2018/5149436  1
2018 Zheng Y, Chen J, Shi X, Zhu X, Wang J, Huang L, Si K, Sheppard CJR, Gong W. Two photon focal modulation microscopy for high-resolution imaging in deep tissue. Journal of Biophotonics. e201800247. PMID 30255623 DOI: 10.1002/jbio.201800247  1
2018 Zhao Q, Shi X, Zhu X, Zheng Y, Wu C, Tang H, Hu L, Xue Y, Gong W, Si K. Large field-of-view correction by using conjugate adaptive optics with multiple guide stars. Journal of Biophotonics. e201800225. PMID 30141268 DOI: 10.1002/jbio.201800225  1
2017 Tang H, Wu C, Gong W, Zheng Y, Zhu X, Wang J, Si K. Optimization for imaging through scattering media for confocal microscopes with divided elliptical apertures. Journal of Biophotonics. PMID 29286580 DOI: 10.1002/jbio.201700293  1
2016 Shen S, Zhu B, Zheng Y, Gong W, Si K. Stripe-shaped apertures in confocal microscopy. Applied Optics. 55: 7613-7618. PMID 27661589  1
2016 Zhu B, Shen S, Zheng Y, Gong W, Si K. Numerical studies of focal modulation microscopy in high-NA system. Optics Express. 24: 19138-19147. PMID 27557193  1
2016 Zhu X, Xia Y, Wang X, Si K, Gong W. Optical Brain Imaging: A Powerful Tool for Neuroscience. Neuroscience Bulletin. PMID 27535148 DOI: 10.1007/s12264-016-0053-6  1
2015 Ma Y, Kuang C, Gong W, Xue L, Zheng Y, Wang Y, Si K, Liu X. Improvements of axial resolution in confocal microscopy with fan-shaped apertures. Applied Optics. 54: 1354-62. PMID 25968199 DOI: 10.1364/AO.54.001354  1
2012 Si K, Fiolka R, Cui M. Fluorescence imaging beyond the ballistic regime by ultrasound pulse guided digital phase conjugation. Nature Photonics. 6: 657-661. PMID 23241552 DOI: 10.1038/Nphoton.2012.205  0.04
2012 Fiolka R, Si K, Cui M. Parallel wavefront measurements in ultrasound pulse guided digital phase conjugation. Optics Express. 20: 24827-34. PMID 23187248 DOI: 10.1364/Oe.20.024827  0.04
2012 Si K, Fiolka R, Cui M. Breaking the spatial resolution barrier via iterative sound-light interaction in deep tissue microscopy. Scientific Reports. 2: 748. PMID 23087813 DOI: 10.1038/Srep00748  0.12
2011 Sheppard CJ, Gong W, Si K. Polarization effects in 4Pi microscopy. Micron (Oxford, England : 1993). 42: 353-9. PMID 21030264 DOI: 10.1016/j.micron.2010.07.013  1
2010 Gong W, Si K, Chen N, Sheppard CJR. Focal modulation microscopy with annular apertures: A numerical study Journal of Biophotonics. 3: 476-484. PMID 20391544 DOI: 10.1002/jbio.200900110  1
2010 Gong W, Si K, Sheppard CJR. Divided-aperture technique for fluorescence confocal microscopy through scattering media Applied Optics. 49: 752-757. PMID 20119030 DOI: 10.1364/AO.49.000752  1
2009 Si K, Gong W, Sheppard CJR. Model for light scattering in biological tissue and cells based on random rough nonspherical particles Applied Optics. 48: 1153-1157. PMID 23567576 DOI: 10.1364/AO.48.001153  1
2009 Gong W, Si K, Chen N, Sheppard CJR. Improved spatial resolution in fluorescence focal modulation microscopy Optics Letters. 34: 3508-3510. PMID 19927193 DOI: 10.1364/OL.34.003508  1
2009 Si K, Gong W, Chen N, Sheppard CJR. Edge enhancement for in-phase focal modulation microscope Applied Optics. 48: 6290-6295. PMID 19904330 DOI: 10.1364/AO.48.006290  1
2009 Gong W, Si K, Sheppard CJR. Optimization of axial resolution in a confocal microscope with D-shaped apertures Applied Optics. 48: 3998-4002. PMID 19593353 DOI: 10.1364/AO.48.003998  1
2009 Si K, Gong W, Sheppard CJR. Three-dimensional coherent transfer function for a confocal microscope with two D-shaped pupils Applied Optics. 48: 810-817. PMID 19209190 DOI: 10.1364/AO.48.000810  1
2008 Sheppard CJ, Gong W, Si K. The divided aperture technique for microscopy through scattering media. Optics Express. 16: 17031-8. PMID 18852813  1
2008 Gong W, Si K, Sheppard CJ. Modeling phase functions in biological tissue. Optics Letters. 33: 1599-601. PMID 18628810  1
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