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Fabian Erdel - Publications

Affiliations: 
Université Toulouse III - Paul Sabatier, Toulouse, Occitanie, France 
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35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Arnould C, Rocher V, Saur F, Bader AS, Muzzopappa F, Collins S, Lesage E, Le Bozec B, Puget N, Clouaire T, Mangeat T, Mourad R, Ahituv N, Noordermeer D, Erdel F, et al. Author Correction: Chromatin compartmentalization regulates the response to DNA damage. Nature. PMID 37974007 DOI: 10.1038/s41586-023-06841-8  0.743
2023 Arnould C, Rocher V, Saur F, Bader AS, Muzzopappa F, Collins S, Lesage E, Le Bozec B, Puget N, Clouaire T, Mangeat T, Mourad R, Ahituv N, Noordermeer D, Erdel F, et al. Chromatin compartmentalization regulates the response to DNA damage. Nature. 623: 183-192. PMID 37853125 DOI: 10.1038/s41586-023-06635-y  0.752
2023 Dolde U, Muzzopappa F, Delesalle C, Neveu J, Erdel F, Vert G. LEAFY homeostasis is regulated via ubiquitin-dependent degradation and sequestration in cytoplasmic condensates. Iscience. 26: 106880. PMID 37260753 DOI: 10.1016/j.isci.2023.106880  0.721
2023 Muckenhuber M, Seufert I, Müller-Ott K, Mallm JP, Klett LC, Knotz C, Hechler J, Kepper N, Erdel F, Rippe K. Epigenetic signals that direct cell type-specific interferon beta response in mouse cells. Life Science Alliance. 6. PMID 36732019 DOI: 10.26508/lsa.202201823  0.586
2022 Muzzopappa F, Hummert J, Anfossi M, Tashev SA, Herten DP, Erdel F. Detecting and quantifying liquid-liquid phase separation in living cells by model-free calibrated half-bleaching. Nature Communications. 13: 7787. PMID 36526633 DOI: 10.1038/s41467-022-35430-y  0.718
2022 Rademacher A, Erdel F, Weinmann R, Rippe K. Assessing the Phase Separation Propensity of Proteins in Living Cells Through Optodroplet Formation. Methods in Molecular Biology (Clifton, N.J.). 2563: 395-411. PMID 36227485 DOI: 10.1007/978-1-0716-2663-4_20  0.562
2021 Frank L, Weinmann R, Erdel F, Trojanowski J, Rippe K. Transcriptional Activation of Heterochromatin by Recruitment of dCas9 Activators. Methods in Molecular Biology (Clifton, N.J.). 2351: 307-320. PMID 34382197 DOI: 10.1007/978-1-0716-1597-3_17  0.575
2021 Muzzopappa F, Hertzog M, Erdel F. DNA length tunes the fluidity of DNA-based condensates. Biophysical Journal. 120: 1288-1300. PMID 33640380 DOI: 10.1016/j.bpj.2021.02.027  0.757
2020 Rademacher A, Erdel F, Trojanowski J, Rippe K. Tracing Reversible Light-Induced Chromatin Binding with Near-infrared Fluorescent Proteins. Methods in Molecular Biology (Clifton, N.J.). 2173: 171-188. PMID 32651918 DOI: 10.1007/978-1-0716-0755-8_12  0.566
2020 Erdel F. Biophysical mechanisms of chromatin patterning. Current Opinion in Genetics & Development. 61: 62-68. PMID 32408103 DOI: 10.1016/j.gde.2020.03.006  0.346
2020 Erdel F, Rademacher A, Vlijm R, Tünnermann J, Frank L, Weinmann R, Schweigert E, Yserentant K, Hummert J, Bauer C, Schumacher S, Al Alwash A, Normand C, Herten DP, Engelhardt J, et al. Mouse Heterochromatin Adopts Digital Compaction States without Showing Hallmarks of HP1-Driven Liquid-Liquid Phase Separation. Molecular Cell. PMID 32101700 DOI: 10.1016/j.molcel.2020.02.005  0.579
2019 Trojanowski J, Rademacher A, Erdel F, Rippe K. Light-Induced Transcription Activation for Time-Lapse Microscopy Experiments in Living Cells. Methods in Molecular Biology (Clifton, N.J.). 2038: 251-270. PMID 31407290 DOI: 10.1007/978-1-4939-9674-2_17  0.562
2019 Mallm JP, Iskar M, Ishaque N, Klett LC, Kugler SJ, Muino JM, Teif VB, Poos AM, Großmann S, Erdel F, Tavernari D, Koser SD, Schumacher S, Brors B, König R, et al. Linking aberrant chromatin features in chronic lymphocytic leukemia to transcription factor networks. Molecular Systems Biology. 15: e8339. PMID 31118277 DOI: 10.15252/Msb.20188339  0.63
2018 Erdel F, Rippe K. Formation of Chromatin Subcompartments by Phase Separation. Biophysical Journal. 114: 2262-2270. PMID 29628210 DOI: 10.1016/j.bpj.2018.03.011  0.629
2017 Rademacher A, Erdel F, Trojanowski J, Schumacher S, Rippe K. Real-time observation of light-controlled transcription in living cells. Journal of Cell Science. 130: 4213-4224. PMID 29122982 DOI: 10.1242/jcs.205534  0.563
2017 Hoffmeister H, Fuchs A, Erdel F, Pinz S, Gröbner-Ferreira R, Bruckmann A, Deutzmann R, Schwartz U, Maldonado R, Huber C, Dendorfer AS, Rippe K, Längst G. CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality. Nucleic Acids Research. PMID 28977666 DOI: 10.1093/nar/gkx711  0.599
2017 Molitor J, Mallm JP, Rippe K, Erdel F. Retrieving Chromatin Patterns from Deep Sequencing Data Using Correlation Functions. Biophysical Journal. 112: 473-490. PMID 28131315 DOI: 10.1016/j.bpj.2017.01.001  0.601
2017 Erdel F, Kratz K, Willcox S, Griffith JD, Greene EC, de Lange T. Telomere Recognition and Assembly Mechanism of Mammalian Shelterin. Cell Reports. 18: 41-53. PMID 28052260 DOI: 10.1016/J.Celrep.2016.12.005  0.608
2016 Erdel F, Greene EC. Generalized nucleation and looping model for epigenetic memory of histone modifications. Proceedings of the National Academy of Sciences of the United States of America. PMID 27382173 DOI: 10.1073/Pnas.1605862113  0.59
2015 Erdel F, Baum M, Rippe K. The viscoelastic properties of chromatin and the nucleoplasm revealed by scale-dependent protein mobility. Journal of Physics. Condensed Matter : An Institute of Physics Journal. 27: 064115. PMID 25563347 DOI: 10.1088/0953-8984/27/6/064115  0.606
2014 Müller-Ott K, Erdel F, Matveeva A, Mallm JP, Rademacher A, Hahn M, Bauer C, Zhang Q, Kaltofen S, Schotta G, Höfer T, Rippe K. Specificity, propagation, and memory of pericentric heterochromatin. Molecular Systems Biology. 10: 746. PMID 25134515 DOI: 10.15252/Msb.20145377  0.612
2014 Baum M, Erdel F, Wachsmuth M, Rippe K. Retrieving the intracellular topology from multi-scale protein mobility mapping in living cells. Nature Communications. 5: 4494. PMID 25058002 DOI: 10.1038/ncomms5494  0.536
2013 Erdel F, Müller-Ott K, Rippe K. Establishing epigenetic domains via chromatin-bound histone modifiers. Annals of the New York Academy of Sciences. 1305: 29-43. PMID 24033539 DOI: 10.1111/nyas.12262  0.639
2013 Toiber D, Erdel F, Bouazoune K, Silberman D, Zhong L, Mulligan P, Sebastian C, Cosentino C, Martinez-Pastor B, Giacosa S, D'Urso A, Näär A, Kingston R, Rippe K, Mostoslavsky R. SIRT6 recruits SNF2H to DNA break sites, preventing genomic instability through chromatin remodeling Molecular Cell. 51: 454-468. PMID 23911928 DOI: 10.1016/J.Molcel.2013.06.018  0.633
2013 Teif VB, Erdel F, Beshnova DA, Vainshtein Y, Mallm JP, Rippe K. Taking into account nucleosomes for predicting gene expression. Methods (San Diego, Calif.). 62: 26-38. PMID 23523656 DOI: 10.1016/j.ymeth.2013.03.011  0.641
2012 Erdel F, Rippe K. Quantifying transient binding of ISWI chromatin remodelers in living cells by pixel-wise photobleaching profile evolution analysis. Proceedings of the National Academy of Sciences of the United States of America. 109: E3221-30. PMID 23129662 DOI: 10.1073/pnas.1209579109  0.624
2011 Erdel F, Rippe K. Chromatin remodelling in mammalian cells by ISWI-type complexes--where, when and why? The Febs Journal. 278: 3608-18. PMID 21810179 DOI: 10.1111/j.1742-4658.2011.08282.x  0.655
2011 Erdel F, Rippe K. Binding kinetics of human ISWI chromatin-remodelers to DNA repair sites elucidate their target location mechanism. Nucleus (Austin, Tex.). 2: 105-12. PMID 21738833 DOI: 10.4161/nucl.2.2.15209  0.661
2011 Erdel F, Krug J, Längst G, Rippe K. Targeting chromatin remodelers: signals and search mechanisms. Biochimica Et Biophysica Acta. 1809: 497-508. PMID 21704204 DOI: 10.1016/j.bbagrm.2011.06.005  0.618
2011 Erdel F, Müller-Ott K, Baum M, Wachsmuth M, Rippe K. Dissecting chromatin interactions in living cells from protein mobility maps. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 19: 99-115. PMID 20848178 DOI: 10.1007/s10577-010-9155-6  0.619
2011 Erdel F, Müller-Ott K, Baum M, Wachsmuth M, Rippe K. Erratum to: Dissecting chromatin interactions in living cells from protein mobility maps Chromosome Research. 19: 267-268. DOI: 10.1007/s10577-011-9200-0  0.542
2010 Erdel F, Schubert T, Marth C, Längst G, Rippe K. Human ISWI chromatin-remodeling complexes sample nucleosomes via transient binding reactions and become immobilized at active sites. Proceedings of the National Academy of Sciences of the United States of America. 107: 19873-8. PMID 20974961 DOI: 10.1073/pnas.1003438107  0.657
2009 Müller KP, Erdel F, Caudron-Herger M, Marth C, Fodor BD, Richter M, Scaranaro M, Beaudouin J, Wachsmuth M, Rippe K. Multiscale analysis of dynamics and interactions of heterochromatin protein 1 by fluorescence fluctuation microscopy. Biophysical Journal. 97: 2876-85. PMID 19948116 DOI: 10.1016/j.bpj.2009.08.057  0.578
2009 Gunkel M, Erdel F, Rippe K, Lemmer P, Kaufmann R, Hörmann C, Amberger R, Cremer C. Dual color localization microscopy of cellular nanostructures. Biotechnology Journal. 4: 927-38. PMID 19548231 DOI: 10.1002/biot.200900005  0.515
2009 Heuvelman G, Erdel F, Wachsmuth M, Rippe K. Analysis of protein mobilities and interactions in living cells by multifocal fluorescence fluctuation microscopy. European Biophysics Journal : Ebj. 38: 813-28. PMID 19543723 DOI: 10.1007/s00249-009-0499-9  0.518
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