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Xiaojing Yang - Publications

Affiliations: 
Chemistry University of Illinois at Chicago, Chicago, IL, United States 
Area:
photoreceptors, light-sensitive proteins
Website:
http://chem.uic.edu/chemistry/people/faculty/xiaojing-yang
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31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Lee SJ, Kim TW, Kim JG, Yang C, Yun SR, Kim C, Ren Z, Kumarapperuma I, Kuk J, Moffat K, Yang X, Ihee H. Light-induced protein structural dynamics in bacteriophytochrome revealed by time-resolved x-ray solution scattering. Science Advances. 8: eabm6278. PMID 35622911 DOI: 10.1126/sciadv.abm6278  0.648
2021 Rinaldi J, Fernández I, Shin H, Sycz G, Gunawardana S, Kumarapperuma I, Paz JM, Otero LH, Cerutti ML, Zorreguieta Á, Ren Z, Klinke S, Yang X, Goldbaum FA. Dimer Asymmetry and Light Activation Mechanism in Blue-Light Sensor Histidine Kinase. Mbio. 12. PMID 33879593 DOI: 10.1128/mBio.00264-21  0.389
2021 Bandara S, Rockwell NC, Zeng X, Ren Z, Wang C, Shin H, Martin SS, Moreno MV, Lagarias JC, Yang X. Crystal structure of a far-red-sensing cyanobacteriochrome reveals an atypical bilin conformation and spectral tuning mechanism. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33727422 DOI: 10.1073/pnas.2025094118  0.592
2020 Ren Z, Wang C, Shin H, Bandara S, Kumarapperuma I, Ren MY, Kang W, Yang X. An automated platform for serial crystallography at room temperature. Iucrj. 7: 1009-1018. PMID 33209315 DOI: 10.1107/S2052252520011288  0.321
2020 Wang D, Li X, Zhang S, Wang L, Yang X, Zhong D. Revealing the origin of multiphasic dynamic behaviors in cyanobacteriochrome. Proceedings of the National Academy of Sciences of the United States of America. PMID 32759207 DOI: 10.1073/Pnas.2001114117  0.304
2020 Wang D, Qin Y, Zhang M, Li X, Wang L, Yang X, Zhong D. The Origin of Ultrafast Multiphasic Dynamics in Photoisomerization of Bacteriophytochrome. The Journal of Physical Chemistry Letters. PMID 32614188 DOI: 10.1021/Acs.Jpclett.0C01394  0.319
2020 Slavov C, Fischer T, Barnoy A, Shin H, Rao AG, Wiebeler C, Zeng X, Sun Y, Xu Q, Gutt A, Zhao KH, Gärtner W, Yang X, Schapiro I, Wachtveitl J. The interplay between chromophore and protein determines the extended excited state dynamics in a single-domain phytochrome. Proceedings of the National Academy of Sciences of the United States of America. PMID 32591422 DOI: 10.1073/Pnas.1921706117  0.397
2019 Shin H, Ren Z, Zeng X, Bandara S, Yang X. Structural basis of molecular logic OR in a dual-sensor histidine kinase. Proceedings of the National Academy of Sciences of the United States of America. PMID 31527275 DOI: 10.1073/Pnas.1910855116  0.398
2019 Wang C, Ralko A, Ren Z, Rosenhouse-Dantsker A, Yang X. Modes of Cholesterol Binding in Membrane Proteins: A Joint Analysis of 73 Crystal Structures. Advances in Experimental Medicine and Biology. 1135: 67-86. PMID 31098811 DOI: 10.1007/978-3-030-14265-0_4  0.328
2018 Ren Z, Ayhan M, Bandara S, Bowatte K, Kumarapperuma I, Gunawardana S, Shin H, Wang C, Zeng X, Yang X. Crystal-on-crystal chips for in situ serial diffraction at room temperature. Lab On a Chip. PMID 29952383 DOI: 10.1039/C8Lc00489G  0.312
2017 Bandara S, Ren Z, Lu L, Zeng X, Shin H, Zhao KH, Yang X. Photoactivation mechanism of a carotenoid-based photoreceptor. Proceedings of the National Academy of Sciences of the United States of America. PMID 28559328 DOI: 10.1073/Pnas.1700956114  0.429
2016 Zhang F, Ma H, Bowatte K, Kwiatkowski D, Mittmann E, Qasem H, Krauss N, Zeng X, Ren Z, Scheerer P, Yang X, Lamparter T. Crystal Structures of Bacterial (6-4) Photolyase Mutants with Impaired DNA Repair Activity. Photochemistry and Photobiology. PMID 27992645 DOI: 10.1111/Php.12699  0.302
2016 Wang C, Flanagan ML, McGillicuddy RD, Zheng H, Ginzburg AR, Yang X, Moffat K, Engel GS. Bacteriophytochrome Photoisomerization Proceeds Homogeneously Despite Heterogeneity in Ground State. Biophysical Journal. 111: 2125-2134. PMID 27851937 DOI: 10.1016/J.Bpj.2016.10.017  0.529
2016 Ren Z, Ren PX, Balusu R, Yang X. Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin. Scientific Reports. 6: 34129. PMID 27658480 DOI: 10.1038/Srep34129  0.359
2015 Yang X, Zeng X, Moffat K, Yang X. Structure of the response regulator RPA3017 involved in red-light signaling in Rhodopseudomonas palustris. Acta Crystallographica. Section F, Structural Biology Communications. 71: 1215-22. PMID 26457509 DOI: 10.1107/S2053230X15014661  0.599
2015 Zeng X, Ren Z, Wu Q, Fan J, Peng PP, Tang K, Zhang R, Zhao KH, Yang X. Dynamic Crystallography Reveals Early Signalling Events in Ultraviolet Photoreceptor UVR8. Nature Plants. 1. PMID 26097745 DOI: 10.1038/Nplants.2014.6  0.395
2015 Yang X, Stojkovi? EA, Ozarowski WB, Kuk J, Davydova E, Moffat K. Light Signaling Mechanism of Two Tandem Bacteriophytochromes. Structure (London, England : 1993). PMID 26095026 DOI: 10.1016/J.Str.2015.04.022  0.616
2015 Yang X, Montano S, Ren Z. How Does Photoreceptor UVR8 Perceive a UV-B Signal? Photochemistry and Photobiology. 91: 993-1003. PMID 25996910 DOI: 10.1111/Php.12470  0.359
2014 Peng PP, Dong LL, Sun YF, Zeng XL, Ding WL, Scheer H, Yang X, Zhao KH. The structure of allophycocyanin B from Synechocystis PCC 6803 reveals the structural basis for the extreme redshift of the terminal emitter in phycobilisomes. Acta Crystallographica. Section D, Biological Crystallography. 70: 2558-69. PMID 25286841 DOI: 10.1107/S1399004714015776  0.33
2014 Zhou W, Ding WL, Zeng XL, Dong LL, Zhao B, Zhou M, Scheer H, Zhao KH, Yang X. Structure and mechanism of the phycobiliprotein lyase CpcT. The Journal of Biological Chemistry. 289: 26677-89. PMID 25074932 DOI: 10.1074/Jbc.M114.586743  0.35
2013 Ren Z, Chan PW, Moffat K, Pai EF, Royer WE, Šrajer V, Yang X. Resolution of structural heterogeneity in dynamic crystallography. Acta Crystallographica. Section D, Biological Crystallography. 69: 946-59. PMID 23695239 DOI: 10.1107/S0907444913003454  0.532
2012 Mitra D, Yang X, Moffat K. Crystal structures of Aureochrome1 LOV suggest new design strategies for optogenetics. Structure (London, England : 1993). 20: 698-706. PMID 22483116 DOI: 10.1016/J.Str.2012.02.016  0.589
2011 Yang X, Ren Z, Kuk J, Moffat K. Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome. Nature. 479: 428-32. PMID 22002602 DOI: 10.1038/Nature10506  0.608
2010 Möglich A, Yang X, Ayers RA, Moffat K. Structure and function of plant photoreceptors. Annual Review of Plant Biology. 61: 21-47. PMID 20192744 DOI: 10.1146/Annurev-Arplant-042809-112259  0.678
2009 Yang X, Kuk J, Moffat K. Conformational differences between the Pfr and Pr states in Pseudomonas aeruginosa bacteriophytochrome. Proceedings of the National Academy of Sciences of the United States of America. 106: 15639-44. PMID 19720999 DOI: 10.1073/Pnas.0902178106  0.582
2008 Yang X, Kuk J, Moffat K. Crystal structure of Pseudomonas aeruginosa bacteriophytochrome: photoconversion and signal transduction. Proceedings of the National Academy of Sciences of the United States of America. 105: 14715-20. PMID 18799746 DOI: 10.1073/Pnas.0806718105  0.594
2007 Yang X, Stojkovic EA, Kuk J, Moffat K. Crystal structure of the chromophore binding domain of an unusual bacteriophytochrome, RpBphP3, reveals residues that modulate photoconversion. Proceedings of the National Academy of Sciences of the United States of America. 104: 12571-6. PMID 17640891 DOI: 10.1073/Pnas.0701737104  0.587
2005 Wu YL, Yang X, Ren Z, McDonnell DP, Norris JD, Willson TM, Greene GL. Structural basis for an unexpected mode of SERM-Mediated ER antagonism Molecular Cell. 18: 413-424. PMID 15893725 DOI: 10.1016/J.Molcel.2005.04.014  0.302
2003 Krasilnikov AS, Yang X, Pan T, Mondragón A. Crystal structure of the specificity domain of ribonuclease P. Nature. 421: 760-4. PMID 12610630 DOI: 10.1038/Nature01386  0.516
1998 Yang X, Ren Z, Moffat K. Structure refinement against synchrotron Laue data: strategies for data collection and reduction. Acta Crystallographica. Section D, Biological Crystallography. 54: 367-77. PMID 9761904 DOI: 10.1107/S0907444997011517  0.481
1996 Yang X, Moffat K. Insights into specificity of cleavage and mechanism of cell entry from the crystal structure of the highly specific Aspergillus ribotoxin, restrictocin. Structure (London, England : 1993). 4: 837-52. PMID 8805570 DOI: 10.1016/S0969-2126(96)00090-1  0.54
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