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Khuloud Jaqaman, PhD - Publications

Affiliations: 
2012- Biophysics University of Texas Southwestern Medical Center, Dallas, TX, United States 
Area:
receptors, tracking, lamins
Website:
http://www.utsouthwestern.edu/labs/jaqaman/
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42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Kittisopikul M, Vahabikashi A, Shimi T, Goldman RD, Jaqaman K. Adaptive Multi-Orientation Resolution Analysis of Complex Filamentous Network Images. Bioinformatics (Oxford, England). PMID 32653917 DOI: 10.1093/Bioinformatics/Btaa627  0.76
2020 Mylvaganam S, Riedl M, Vega A, Collins RF, Jaqaman K, Grinstein S, Freeman SA. Stabilization of Endothelial Receptor Arrays by a Polarized Spectrin Cytoskeleton Facilitates Rolling and Adhesion of Leukocytes. Cell Reports. 31: 107798. PMID 32579925 DOI: 10.1016/J.Celrep.2020.107798  0.773
2020 de Oliveira LR, Jaqaman K. Determining Membrane Protein Interaction Kinetics through Single-Molecule Imaging and Stochastic Modeling Biophysical Journal. 118: 54a-55a. DOI: 10.1016/J.Bpj.2019.11.478  0.305
2019 de Oliveira LR, Jaqaman K. FISIK: Framework for the Inference of In Situ Interaction Kinetics from Single-Molecule Imaging Data. Biophysical Journal. PMID 31443908 DOI: 10.1016/J.Bpj.2019.07.050  0.343
2019 Ditlev JA, Vega AR, Köster DV, Su X, Tani T, Lakoduk AM, Vale RD, Mayor S, Jaqaman K, Rosen MK. A composition-dependent molecular clutch between T cell signaling condensates and actin. Elife. 8. PMID 31268421 DOI: 10.7554/Elife.42695  0.767
2019 Ditlev JA, Vega AR, Köster DV, Su X, Tani T, Lakoduk AM, Vale RD, Mayor S, Jaqaman K, Rosen MK. Author response: A composition-dependent molecular clutch between T cell signaling condensates and actin Elife. DOI: 10.7554/Elife.42695.061  0.75
2018 Robert A, Tian P, Adam SA, Kittisopikul M, Jaqaman K, Goldman RD, Gelfand VI. Kinesin-dependent transport of keratin filaments: a unified mechanism for intermediate filament transport. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. fj201800604R. PMID 29944446 DOI: 10.1096/Fj.201800604R  0.76
2018 Vega AR, Freeman SA, Grinstein S, Jaqaman K. Multistep Track Segmentation and Motion Classification for Transient Mobility Analysis. Biophysical Journal. 114: 1018-1025. PMID 29539390 DOI: 10.1016/J.Bpj.2018.01.012  0.747
2018 Freeman SA, Vega A, Riedl M, Collins RF, Ostrowski PP, Woods EC, Bertozzi CR, Tammi MI, Lidke DS, Johnson P, Mayor S, Jaqaman K, Grinstein S. Transmembrane Pickets Connect Cyto- and Pericellular Skeletons Forming Barriers to Receptor Engagement. Cell. 172: 305-317.e10. PMID 29328918 DOI: 10.1016/J.Cell.2017.12.023  0.768
2018 de Oliveira LR, Yirdaw R, Jaqaman K. Determining Receptor Interaction Kinetics through Single Molecule Imaging and Computational Modeling Biophysical Journal. 114: 679a. DOI: 10.1016/J.Bpj.2017.11.3662  0.31
2018 Vega A, Ditlev J, Koster D, Su X, Vale R, Mayor S, Rosen MK, Jaqaman K. Differential LAT Microcluster Composition and ACTIN-Dependent Movement at the Immunological Synapse Center Biophysical Journal. 114: 201a. DOI: 10.1016/J.Bpj.2017.11.1123  0.737
2017 Roudot P, Liya Ding, Jaqaman K, Kervrann C, Danuser G. Piecewise-Stationary Motion Modeling and Iterative Smoothing to Track Heterogeneous Particle Motions in Dense Environments. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. 26: 5395-5410. PMID 29388914 DOI: 10.1109/Tip.2017.2707803  0.528
2016 Githaka JM, Vega AR, Baird MA, Davidson MW, Jaqaman K, Touret N. Ligand-induced growth and compaction of CD36 nanoclusters enriched in Fyn induces Fyn signaling. Journal of Cell Science. PMID 27694211 DOI: 10.1242/Jcs.188946  0.768
2016 Jaqaman K, Galbraith JA, Davidson MW, Galbraith CG. Changes in single-molecule integrin dynamics linked to local cellular behavior. Molecular Biology of the Cell. PMID 27009207 DOI: 10.1091/Mbc.E16-01-0018  0.365
2016 Maringa Githaka J, Vega AR, Baird MA, Davidson MW, Jaqaman K, Touret N. Ligand-Induced Growth of CD36-Fyn Clusters Induces Signaling Biophysical Journal. 110: 593a. DOI: 10.1016/J.Bpj.2015.11.3163  0.774
2016 Vega AR, Ditlev JA, Rosen MK, Jaqaman K. Quantitative Analysis of Cortical Actin-Membrane Microcluster Interactions Biophysical Journal. 110: 330a. DOI: 10.1016/J.Bpj.2015.11.1775  0.773
2015 Shimi T, Kittisopikul M, Tran J, Goldman AE, Adam SA, Zheng Y, Jaqaman K, Goldman RD. Structural Organization of Nuclear Lamins A, C, B1 and B2 Revealed by Super-Resolution Microscopy. Molecular Biology of the Cell. PMID 26310440 DOI: 10.1091/Mbc.E15-07-0461  0.75
2015 Maringa JG, Vega A, Davidson MW, Jaqaman K, Touret N. Plasma Membrane Organization Promotes CD36 Signal Transduction in Endothelial Cells Biophysical Journal. 108: 98a-99a. DOI: 10.1016/J.Bpj.2014.11.565  0.777
2015 Jaqaman K, Galbraith JA, Davidson M, Danuser G, Galbraith CG. Multi-Scale Linkages between Single-Molecule Integrin Dynamics and Cell Protrusion Biophysical Journal. 108: 418a. DOI: 10.1016/J.Bpj.2014.11.2287  0.593
2014 Jaumouillé V, Farkash Y, Jaqaman K, Das R, Lowell CA, Grinstein S. Actin cytoskeleton reorganization by syk regulates fcγ receptor responsiveness by increasing its lateral mobility and clustering Developmental Cell. 29: 534-546. PMID 24914558 DOI: 10.1016/J.Devcel.2014.04.031  0.373
2013 Marco E, Dorn JF, Hsu PH, Jaqaman K, Sorger PK, Danuser G. S. cerevisiae chromosomes biorient via gradual resolution of syntely between S phase and anaphase. Cell. 154: 1127-39. PMID 23993100 DOI: 10.1016/J.Cell.2013.08.008  0.72
2012 Jaqaman K, Grinstein S. Regulation from within: The cytoskeleton in transmembrane signaling Trends in Cell Biology. 22: 515-526. PMID 22917551 DOI: 10.1016/J.Tcb.2012.07.006  0.374
2012 Fitieh A, Locke A, Lipinski T, Ungarian S, Bundle D, Jaqaman K, Touret N. Activation of the Innate Immune Receptor Dectin-1 by Clustering Biophysical Journal. 102: 665a. DOI: 10.1016/J.Bpj.2011.11.3623  0.348
2012 Chanda A, Githaka J, Danuser G, Touret N, Jaqaman K. Single Molecule Study of Thrombospondin-1 Receptors in the Endothelial Cell Plasma Membrane Biophysical Journal. 102: 513a. DOI: 10.1016/J.Bpj.2011.11.2811  0.598
2011 Jaqaman K, Kuwata H, Touret N, Collins R, Trimble WS, Danuser G, Grinstein S. Cytoskeletal control of CD36 diffusion promotes its receptor and signaling function. Cell. 146: 593-606. PMID 21854984 DOI: 10.1016/J.Cell.2011.06.049  0.6
2011 Applegate KT, Besson S, Matov A, Bagonis MH, Jaqaman K, Danuser G. plusTipTracker: Quantitative image analysis software for the measurement of microtubule dynamics. Journal of Structural Biology. 176: 168-84. PMID 21821130 DOI: 10.1016/J.Jsb.2011.07.009  0.563
2011 Jaqaman K, Kuwata H, Touret N, Collins R, Trimble WS, Danuser G, Grinstein S. Cytoskeletal Control of Receptor Diffusion in Membrane Promotes CD36 Function and Signaling Biophysical Journal. 100: 21a. DOI: 10.1016/J.Bpj.2010.12.323  0.61
2010 Flannagan RS, Harrison RE, Yip CM, Jaqaman K, Grinstein S. Dynamic macrophage "probing" is required for the efficient capture of phagocytic targets Journal of Cell Biology. 191: 1205-1218. PMID 21135140 DOI: 10.1083/Jcb.201007056  0.35
2010 Jaqaman K, King EM, Amaro AC, Winter JR, Dorn JF, Elliott HL, McHedlishvili N, McClelland SE, Porter IM, Posch M, Toso A, Danuser G, McAinsh AD, Meraldi P, Swedlow JR. Kinetochore alignment within the metaphase plate is regulated by centromere stiffness and microtubule depolymerases. The Journal of Cell Biology. 188: 665-79. PMID 20212316 DOI: 10.1083/Jcb.200909005  0.727
2010 Kanchanawong P, Hou JH, Zajac AL, Aguet F, Davidson MW, Danuser G, Jaqaman K, Waterman CM. Analysis of Single Integrin Behavior in Living Cells Biophysical Journal. 98: 558a. DOI: 10.1016/J.Bpj.2009.12.3023  0.604
2009 Jaqaman K, Danuser G. Computational image analysis of cellular dynamics: a case study based on particle tracking. Cold Spring Harbor Protocols. 2009: pdb.top65. PMID 20150102 DOI: 10.1101/Pdb.Top65  0.553
2009 Loerke D, Mettlen M, Yarar D, Jaqaman K, Jaqaman H, Danuser G, Schmid SL. Cargo and dynamin regulate clathrin-coated pit maturation. Plos Biology. 7: e57. PMID 19296720 DOI: 10.1371/Journal.Pbio.1000057  0.563
2009 Jaqaman K, Kuwata H, Trimble W, Grinstein S, Danuser G. Cortical Cytoskeletal Structures Constrain CD36 Receptor Motion at the Cell Surface to Enhance Aggregation and Signaling Biophysical Journal. 96: 281a-282a. DOI: 10.1016/J.Bpj.2008.12.1394  0.603
2008 Jaqaman K, Loerke D, Mettlen M, Kuwata H, Grinstein S, Schmid SL, Danuser G. Robust single-particle tracking in live-cell time-lapse sequences. Nature Methods. 5: 695-702. PMID 18641657 DOI: 10.1038/Nmeth.1237  0.544
2007 Jaqaman K, Dorn JF, Marco E, Sorger PK, Danuser G. Phenotypic clustering of yeast mutants based on kinetochore microtubule dynamics. Bioinformatics (Oxford, England). 23: 1666-73. PMID 17483508 DOI: 10.1093/Bioinformatics/Btm230  0.744
2006 Jaqaman K, Danuser G. Linking data to models: data regression. Nature Reviews. Molecular Cell Biology. 7: 813-9. PMID 17006434 DOI: 10.1038/Nrm2030  0.526
2006 Jaqaman K, Dorn JF, Jelson GS, Tytell JD, Sorger PK, Danuser G. Comparative autoregressive moving average analysis of kinetochore microtubule dynamics in yeast. Biophysical Journal. 91: 2312-25. PMID 16940476 DOI: 10.1529/Biophysj.106.080333  0.727
2005 Dorn JF, Jaqaman K, Rines DR, Jelson GS, Sorger PK, Danuser G. Yeast kinetochore microtubule dynamics analyzed by high-resolution three-dimensional microscopy. Biophysical Journal. 89: 2835-54. PMID 16192284 DOI: 10.1529/Biophysj.104.058461  0.729
2004 Jaqaman K, Tuncay K, Ortoleva PJ. Classical density functional theory of orientational order at interfaces: application to water. The Journal of Chemical Physics. 120: 926-38. PMID 15267929 DOI: 10.1063/1.1630012  0.501
2004 Jaqaman K, Tuncay K, Ortoleva PJ. Classical density functional theory of orientational order at interfaces: Application to water Journal of Chemical Physics. 120: 926-938. DOI: 10.1063/1.1630012  0.42
2003 Ortoleva P, Berry E, Brun Y, Fan J, Fontus M, Hubbard K, Jaqaman K, Jarymowycz L, Navid A, Sayyed-Ahmad A, Shreif Z, Stanley F, Tuncay K, Weitzke E, Wu LC. The Karyote physico-chemical genomic, proteomic, metabolic cell modeling system. Omics : a Journal of Integrative Biology. 7: 269-83. PMID 14583116 DOI: 10.1089/153623103322452396  0.67
2002 Jaqaman K, Ortoleva PJ. New space warping method for the simulation of large-scale macromolecular conformational changes Journal of Computational Chemistry. 23: 484-491. PMID 11908085 DOI: 10.1002/Jcc.10040  0.493
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