James T. Koerber, Ph.D. - Publications

University of California, Berkeley, Berkeley, CA 
viral gene delivery, stem cells

24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Koerber JT, Hornsby MJ, Wells JA. An improved single-chain Fab platform for efficient display and recombinant expression. Journal of Molecular Biology. 427: 576-86. PMID 25481745 DOI: 10.1016/j.jmb.2014.11.017  1
2015 Kotterman MA, Koerber JT, Nam JS, Cho YH, Kim SH, Jang JH, Lim KI. Enhanced cellular secretion of AAV2 by expression of foreign viral envelope proteins Biochemical Engineering Journal. 93: 108-114. DOI: 10.1016/j.bej.2014.09.015  1
2014 Ordureau A, Sarraf SA, Duda DM, Heo JM, Jedrychowski MP, Sviderskiy VO, Olszewski JL, Koerber JT, Xie T, Beausoleil SA, Wells JA, Gygi SP, Schulman BA, Harper JW. Quantitative proteomics reveal a feedforward mechanism for mitochondrial PARKIN translocation and ubiquitin chain synthesis. Molecular Cell. 56: 360-75. PMID 25284222 DOI: 10.1016/j.molcel.2014.09.007  1
2013 Koerber JT, Thomsen ND, Hannigan BT, Degrado WF, Wells JA. Nature-inspired design of motif-specific antibody scaffolds. Nature Biotechnology. 31: 916-21. PMID 23955275 DOI: 10.1038/nbt.2672  1
2013 Thomsen ND, Koerber JT, Wells JA. Structural snapshots reveal distinct mechanisms of procaspase-3 and -7 activation. Proceedings of the National Academy of Sciences of the United States of America. 110: 8477-82. PMID 23650375 DOI: 10.1073/pnas.1306759110  1
2013 Kotterman MA, Hwang BY, Stone D, Koerber JT, Couto L, Mingozzi F, High K, Schaffer DV. Directed evolution of adeno-associated virus for enhanced evasion of human neutralizing antibodies Food, Pharmaceutical and Bioengineering Division 2013 - Core Programming Area At the 2013 Aiche Annual Meeting: Global Challenges For Engineering a Sustainable Future. 413-414.  1
2011 Dickey DD, Excoffon KJ, Koerber JT, Bergen J, Steines B, Klesney-Tait J, Schaffer DV, Zabner J. Enhanced sialic acid-dependent endocytosis explains the increased efficiency of infection of airway epithelia by a novel adeno-associated virus. Journal of Virology. 85: 9023-30. PMID 21697483 DOI: 10.1128/JVI.05154-11  1
2011 Jang JH, Koerber JT, Kim JS, Asuri P, Vazin T, Bartel M, Keung A, Kwon I, Park KI, Schaffer DV. An evolved adeno-associated viral variant enhances gene delivery and gene targeting in neural stem cells. Molecular Therapy : the Journal of the American Society of Gene Therapy. 19: 667-75. PMID 21224831 DOI: 10.1038/mt.2010.287  1
2010 Jang JH, Koerber JT, Gujraty K, Bethi SR, Kane RS, Schaffer DV. Surface immobilization of hexa-histidine-tagged adeno-associated viral vectors for localized gene delivery. Gene Therapy. 17: 1384-9. PMID 20508598 DOI: 10.1038/gt.2010.81  1
2009 Klimczak RR, Koerber JT, Dalkara D, Flannery JG, Schaffer DV. A novel adeno-associated viral variant for efficient and selective intravitreal transduction of rat Müller cells. Plos One. 4: e7467. PMID 19826483 DOI: 10.1371/journal.pone.0007467  1
2009 Koerber JT, Klimczak R, Jang JH, Dalkara D, Flannery JG, Schaffer DV. Molecular evolution of adeno-associated virus for enhanced glial gene delivery. Molecular Therapy : the Journal of the American Society of Gene Therapy. 17: 2088-95. PMID 19672246 DOI: 10.1038/mt.2009.184  1
2009 Excoffon KJ, Koerber JT, Dickey DD, Murtha M, Keshavjee S, Kaspar BK, Zabner J, Schaffer DV. Directed evolution of adeno-associated virus to an infectious respiratory virus. Proceedings of the National Academy of Sciences of the United States of America. 106: 3865-70. PMID 19237554 DOI: 10.1073/pnas.0813365106  1
2008 Koerber JT, Jang JH, Schaffer DV. DNA shuffling of adeno-associated virus yields functionally diverse viral progeny. Molecular Therapy : the Journal of the American Society of Gene Therapy. 16: 1703-9. PMID 18728640 DOI: 10.1038/mt.2008.167  1
2008 Schaffer DV, Koerber JT, Lim KI. Molecular engineering of viral gene delivery vehicles. Annual Review of Biomedical Engineering. 10: 169-94. PMID 18647114 DOI: 10.1146/annurev.bioeng.10.061807.160514  1
2008 Koerber JT, Schaffer DV. Transposon-based mutagenesis generates diverse adeno-associated viral libraries with novel gene delivery properties. Methods in Molecular Biology (Clifton, N.J.). 434: 161-70. PMID 18470644 DOI: 10.1007/978-1-60327-248-3_10  1
2008 Koerber JT, Excoffon K, Kaspar B, Zabner J, Schaffer DV. Engineering of a novel AAV vector in a human airway model system for cystic fibrosis gene therapy Aiche Annual Meeting, Conference Proceedings 1
2008 Kwon I, Koerber JT, Schaffer DV. Directed evolution of AAV to target tissue-specific vascular endothelium Aiche Annual Meeting, Conference Proceedings 1
2008 Koerber JT, Schaffer DV. A rapid, general platform to identify structure/function relationships of a viral protein Aiche Annual Meeting, Conference Proceedings 1
2007 Koerber JT, Jang JH, Yu JH, Kane RS, Schaffer DV. Engineering adeno-associated virus for one-step purification via immobilized metal affinity chromatography. Human Gene Therapy. 18: 367-78. PMID 17437357 DOI: 10.1089/hum.2006.139  1
2006 Koerber JT, Maheshri N, Kaspar BK, Schaffer DV. Construction of diverse adeno-associated viral libraries for directed evolution of enhanced gene delivery vehicles. Nature Protocols. 1: 701-6. PMID 17406299 DOI: 10.1038/nprot.2006.93  1
2006 Maheshri N, Koerber JT, Kaspar BK, Schaffer DV. Directed evolution of adeno-associated virus yields enhanced gene delivery vectors. Nature Biotechnology. 24: 198-204. PMID 16429148 DOI: 10.1038/nbt1182  1
2005 Koerber JT, Maheshri N, Schaffer DV. Directed evolution of Aav to generate mutants with enhanced transport properties Aiche Annual Meeting, Conference Proceedings. 8565.  1
2004 Forrest ML, Meister GE, Koerber JT, Pack DW. Partial acetylation of polyethylenimine enhances in vitro gene delivery. Pharmaceutical Research. 21: 365-71. PMID 15032320 DOI: 10.1023/B:PHAM.0000016251.42392.1e  1
2003 Forrest ML, Koerber JT, Pack DW. A degradable polyethylenimine derivative with low toxicity for highly efficient gene delivery. Bioconjugate Chemistry. 14: 934-40. PMID 13129396 DOI: 10.1021/bc034014g  1
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