James R. Brister, Ph.D. - Publications

Affiliations: 
University of Florida, Gainesville, Gainesville, FL, United States 
Area:
Biology of AAV

19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Brister JR, Ako-Adjei D, Bao Y, Blinkova O. NCBI viral genomes resource. Nucleic Acids Research. 43: D571-7. PMID 25428358 DOI: 10.1093/nar/gku1207  1
2015 . Database resources of the National Center for Biotechnology Information. Nucleic Acids Research. 43: D6-17. PMID 25398906 DOI: 10.1093/nar/gku1130  1
2015 Ako-Adjei D, Fu W, Wallin C, Katz KS, Song G, Darji D, Brister JR, Ptak RG, Pruitt KD. HIV-1, human interaction database: current status and new features. Nucleic Acids Research. 43: D566-70. PMID 25378338 DOI: 10.1093/nar/gku1126  1
2014 Brister JR, Bao Y, Zhdanov SA, Ostapchuck Y, Chetvernin V, Kiryutin B, Zaslavsky L, Kimelman M, Tatusova TA. Virus Variation Resource--recent updates and future directions. Nucleic Acids Research. 42: D660-5. PMID 24304891 DOI: 10.1093/nar/gkt1268  1
2013 Kuhn JH, Bao Y, Bavari S, Becker S, Bradfute S, Brister JR, Bukreyev AA, Caì Y, Chandran K, Davey RA, Dolnik O, Dye JM, Enterlein S, Gonzalez JP, Formenty P, et al. Virus nomenclature below the species level: a standardized nomenclature for laboratory animal-adapted strains and variants of viruses assigned to the family Filoviridae. Archives of Virology. 158: 1425-32. PMID 23358612 DOI: 10.1007/s00705-012-1594-2  1
2013 Kuhn JH, Bao Y, Bavari S, Becker S, Bradfute S, Brister JR, Bukreyev AA, Chandran K, Davey RA, Dolnik O, Dye JM, Enterlein S, Hensley LE, Honko AN, Jahrling PB, et al. Virus nomenclature below the species level: a standardized nomenclature for natural variants of viruses assigned to the family Filoviridae. Archives of Virology. 158: 301-11. PMID 23001720 DOI: 10.1007/s00705-012-1454-0  1
2012 Dolezal D, Jones CE, Lai X, Brister JR, Mueser TC, Nossal NG, Hinton DM. Mutational analysis of the T4 gp59 helicase loader reveals its sites for interaction with helicase, single-stranded binding protein, and DNA. The Journal of Biological Chemistry. 287: 18596-607. PMID 22427673 DOI: 10.1074/jbc.M111.332080  1
2011 Klimke W, O'Donovan C, White O, Brister JR, Clark K, Fedorov B, Mizrachi I, Pruitt KD, Tatusova T. Solving the Problem: Genome Annotation Standards before the Data Deluge. Standards in Genomic Sciences. 5: 168-93. PMID 22180819 DOI: 10.4056/sigs.2084864  1
2011 Matthijnssens J, Ciarlet M, McDonald SM, Attoui H, Bányai K, Brister JR, Buesa J, Esona MD, Estes MK, Gentsch JR, Iturriza-Gómara M, Johne R, Kirkwood CD, Martella V, Mertens PP, et al. Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG). Archives of Virology. 156: 1397-413. PMID 21597953 DOI: 10.1007/s00705-011-1006-z  1
2011 Seto D, Chodosh J, Brister JR, Jones MS. Using the whole-genome sequence to characterize and name human adenoviruses. Journal of Virology. 85: 5701-2. PMID 21450823 DOI: 10.1128/JVI.00354-11  1
2010 Brister JR, Bao Y, Kuiken C, Lefkowitz EJ, Le Mercier P, Leplae R, Madupu R, Scheuermann RH, Schobel S, Seto D, Shrivastava S, Sterk P, Zeng Q, Klimke W, Tatusova T. Towards Viral Genome Annotation Standards, Report from the 2010 NCBI Annotation Workshop. Viruses. 2: 2258-68. PMID 21994619 DOI: 10.3390/v2102258  1
2010 Kreuzer KN, Brister JR. Initiation of bacteriophage T4 DNA replication and replication fork dynamics: a review in the Virology Journal series on bacteriophage T4 and its relatives. Virology Journal. 7: 358. PMID 21129203 DOI: 10.1186/1743-422X-7-358  1
2008 Brister JR. Origin activation requires both replicative and accessory helicases during T4 infection. Journal of Molecular Biology. 377: 1304-13. PMID 18314134 DOI: 10.1016/j.jmb.2008.02.002  1
2007 Brister JR, Nossal NG. Multiple origins of replication contribute to a discontinuous pattern of DNA synthesis across the T4 genome during infection. Journal of Molecular Biology. 368: 336-48. PMID 17346743 DOI: 10.1016/j.jmb.2007.02.008  1
2004 Lou HJ, Brister JR, Li JJ, Chen W, Muzyczka N, Tan W. Adeno-associated virus Rep78/Rep68 promotes localized melting of the rep binding element in the absence of adenosine triphosphate. Chembiochem : a European Journal of Chemical Biology. 5: 324-32. PMID 14997524 DOI: 10.1002/cbic.200300737  1
2003 Li Z, Brister JR, Im DS, Muzyczka N. Characterization of the adenoassociated virus Rep protein complex formed on the viral origin of DNA replication. Virology. 313: 364-76. PMID 12954205 DOI: 10.1016/S0042-6822(03)00340-4  1
2000 Brister JR, Muzyczka N. Mechanism of Rep-mediated adeno-associated virus origin nicking. Journal of Virology. 74: 7762-71. PMID 10933682 DOI: 10.1128/JVI.74.17.7762-7771.2000  1
1999 Brister JR, Muzyczka N. Rep-mediated nicking of the adeno-associated virus origin requires two biochemical activities, DNA helicase activity and transesterification. Journal of Virology. 73: 9325-36. PMID 10516041  1
1995 Lalwani AK, Brister JR, Fex J, Grundfast KM, Ploplis B, San Agustin TB, Wilcox ER. Further elucidation of the genomic structure of PAX3, and identification of two different point mutations within the PAX3 homeobox that cause Waardenburg syndrome type 1 in two families. American Journal of Human Genetics. 56: 75-83. PMID 7825605  1
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