| Year |
Citation |
Score |
| 2018 |
Tolstoy I, Kropinski AM, Brister JR. Bacteriophage Taxonomy: An Evolving Discipline. Methods in Molecular Biology (Clifton, N.J.). 1693: 57-71. PMID 29119432 DOI: 10.1007/978-1-4939-7395-8_6 |
0.336 |
|
| 2017 |
Simmonds P, Adams MJ, Benkő M, Breitbart M, Brister JR, Carstens EB, Davison AJ, Delwart E, Gorbalenya AE, Harrach B, Hull R, King AM, Koonin EV, Krupovic M, Kuhn JH, et al. Consensus statement: Virus taxonomy in the age of metagenomics. Nature Reviews. Microbiology. PMID 28134265 DOI: 10.1038/Nrmicro.2016.177 |
0.308 |
|
| 2016 |
Hatcher EL, Zhdanov SA, Bao Y, Blinkova O, Nawrocki EP, Ostapchuck Y, Schäffer AA, Brister JR. Virus Variation Resource - improved response to emergent viral outbreaks. Nucleic Acids Research. PMID 27899678 DOI: 10.1093/nar/gkw1065 |
0.331 |
|
| 2014 |
Brister JR, Bao Y, Zhdanov SA, Ostapchuck Y, Chetvernin V, Kiryutin B, Zaslavsky L, Kimelman M, Tatusova TA. Virus Variation Resource--recent updates and future directions. Nucleic Acids Research. 42: D660-5. PMID 24304891 DOI: 10.1093/nar/gkt1268 |
0.304 |
|
| 2012 |
Dolezal D, Jones CE, Lai X, Brister JR, Mueser TC, Nossal NG, Hinton DM. Mutational analysis of the T4 gp59 helicase loader reveals its sites for interaction with helicase, single-stranded binding protein, and DNA. The Journal of Biological Chemistry. 287: 18596-607. PMID 22427673 DOI: 10.1074/Jbc.M111.332080 |
0.498 |
|
| 2010 |
Kreuzer KN, Brister JR. Initiation of bacteriophage T4 DNA replication and replication fork dynamics: a review in the Virology Journal series on bacteriophage T4 and its relatives. Virology Journal. 7: 358. PMID 21129203 DOI: 10.1186/1743-422X-7-358 |
0.462 |
|
| 2008 |
Brister JR. Origin activation requires both replicative and accessory helicases during T4 infection. Journal of Molecular Biology. 377: 1304-13. PMID 18314134 DOI: 10.1016/j.jmb.2008.02.002 |
0.356 |
|
| 2007 |
Brister JR, Nossal NG. Multiple origins of replication contribute to a discontinuous pattern of DNA synthesis across the T4 genome during infection. Journal of Molecular Biology. 368: 336-48. PMID 17346743 DOI: 10.1016/j.jmb.2007.02.008 |
0.421 |
|
| 2004 |
Lou HJ, Brister JR, Li JJ, Chen W, Muzyczka N, Tan W. Adeno-associated virus Rep78/Rep68 promotes localized melting of the rep binding element in the absence of adenosine triphosphate. Chembiochem : a European Journal of Chemical Biology. 5: 324-32. PMID 14997524 DOI: 10.1002/Cbic.200300737 |
0.542 |
|
| 2003 |
Li Z, Brister JR, Im DS, Muzyczka N. Characterization of the adenoassociated virus Rep protein complex formed on the viral origin of DNA replication. Virology. 313: 364-76. PMID 12954205 DOI: 10.1016/S0042-6822(03)00340-4 |
0.552 |
|
| 2000 |
Brister JR, Muzyczka N. Mechanism of Rep-mediated adeno-associated virus origin nicking. Journal of Virology. 74: 7762-71. PMID 10933682 DOI: 10.1128/Jvi.74.17.7762-7771.2000 |
0.604 |
|
| 1999 |
Brister JR, Muzyczka N. Rep-mediated nicking of the adeno-associated virus origin requires two biochemical activities, DNA helicase activity and transesterification. Journal of Virology. 73: 9325-36. PMID 10516041 DOI: 10.1128/Jvi.73.11.9325-9336.1999 |
0.577 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2020 |
Schäffer AA, Hatcher EL, Yankie L, Shonkwiler L, Brister JR, Karsch-Mizrachi I, Nawrocki EP. VADR: validation and annotation of virus sequence submissions to GenBank. Bmc Bioinformatics. 21: 211. PMID 32448124 DOI: 10.1186/s12859-020-3537-3 |
0.3 |
|
| 2020 |
Martí-Carreras J, Gener AR, Miller SD, Brito AF, Camacho CE, Connor R, Deboutte W, Glickman C, Kristensen DM, Meyer WK, Modha S, Norris AL, Saha S, Belford AK, Biederstedt E, ... Brister JR, et al. NCBI's Virus Discovery Codeathon: Building "FIVE" -The Federated Index of Viral Experiments API Index. Viruses. 12. PMID 33322070 DOI: 10.3390/v12121424 |
0.298 |
|
| 2014 |
Kuhn JH, Andersen KG, Bào Y, Bavari S, Becker S, Bennett RS, Bergman NH, Blinkova O, Bradfute S, Brister JR, Bukreyev A, Chandran K, Chepurnov AA, Davey RA, Dietzgen RG, et al. Filovirus RefSeq entries: evaluation and selection of filovirus type variants, type sequences, and names. Viruses. 6: 3663-82. PMID 25256396 DOI: 10.3390/V6093663 |
0.297 |
|
| 2019 |
Bin Jang H, Bolduc B, Zablocki O, Kuhn JH, Roux S, Adriaenssens EM, Brister JR, Kropinski AM, Krupovic M, Lavigne R, Turner D, Sullivan MB. Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks. Nature Biotechnology. PMID 31061483 DOI: 10.1038/s41587-019-0100-8 |
0.293 |
|
| 2012 |
Brister JR, Le Mercier P, Hu JC. Microbial virus genome annotation-mustering the troops to fight the sequence onslaught. Virology. 434: 175-80. PMID 23084289 DOI: 10.1016/j.virol.2012.09.027 |
0.287 |
|
| 2014 |
Kuhn JH, Andersen KG, Baize S, Bào Y, Bavari S, Berthet N, Blinkova O, Brister JR, Clawson AN, Fair J, Gabriel M, Garry RF, Gire SK, Goba A, Gonzalez JP, et al. Nomenclature- and database-compatible names for the two Ebola virus variants that emerged in Guinea and the Democratic Republic of the Congo in 2014. Viruses. 6: 4760-99. PMID 25421896 DOI: 10.3390/V6114760 |
0.286 |
|
| 2020 |
Adriaenssens EM, Sullivan MB, Knezevic P, van Zyl LJ, Sarkar BL, Dutilh BE, Alfenas-Zerbini P, Łobocka M, Tong Y, Brister JR, Moreno Switt AI, Klumpp J, Aziz RK, Barylski J, Uchiyama J, et al. Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee. Archives of Virology. PMID 32162068 DOI: 10.1007/s00705-020-04577-8 |
0.279 |
|
| 2015 |
Brister JR, Ako-Adjei D, Bao Y, Blinkova O. NCBI viral genomes resource. Nucleic Acids Research. 43: D571-7. PMID 25428358 DOI: 10.1093/Nar/Gku1207 |
0.278 |
|
| 2013 |
Kuhn JH, Bao Y, Bavari S, Becker S, Bradfute S, Brister JR, Bukreyev AA, Chandran K, Davey RA, Dolnik O, Dye JM, Enterlein S, Hensley LE, Honko AN, Jahrling PB, et al. Virus nomenclature below the species level: a standardized nomenclature for natural variants of viruses assigned to the family Filoviridae. Archives of Virology. 158: 301-11. PMID 23001720 DOI: 10.1007/S00705-012-1454-0 |
0.273 |
|
| 2010 |
Brister JR, Bao Y, Kuiken C, Lefkowitz EJ, Le Mercier P, Leplae R, Madupu R, Scheuermann RH, Schobel S, Seto D, Shrivastava S, Sterk P, Zeng Q, Klimke W, Tatusova T. Towards Viral Genome Annotation Standards, Report from the 2010 NCBI Annotation Workshop. Viruses. 2: 2258-68. PMID 21994619 DOI: 10.3390/V2102258 |
0.273 |
|
| 2018 |
Roux S, Adriaenssens EM, Dutilh BE, Koonin EV, Kropinski AM, Krupovic M, Kuhn JH, Lavigne R, Brister JR, Varsani A, Amid C, Aziz RK, Bordenstein SR, Bork P, Breitbart M, et al. Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature Biotechnology. PMID 30556814 DOI: 10.1038/Nbt.4306 |
0.255 |
|
| 2011 |
Seto D, Chodosh J, Brister JR, Jones MS. Using the whole-genome sequence to characterize and name human adenoviruses. Journal of Virology. 85: 5701-2. PMID 21450823 DOI: 10.1128/Jvi.00354-11 |
0.252 |
|
| 2013 |
Kuhn JH, Bao Y, Bavari S, Becker S, Bradfute S, Brister JR, Bukreyev AA, Caì Y, Chandran K, Davey RA, Dolnik O, Dye JM, Enterlein S, Gonzalez JP, Formenty P, et al. Virus nomenclature below the species level: a standardized nomenclature for laboratory animal-adapted strains and variants of viruses assigned to the family Filoviridae. Archives of Virology. 158: 1425-32. PMID 23358612 DOI: 10.1007/S00705-012-1594-2 |
0.247 |
|
| 1995 |
Lalwani AK, Brister JR, Fex J, Grundfast KM, Ploplis B, San Agustin TB, Wilcox ER. Further elucidation of the genomic structure of PAX3, and identification of two different point mutations within the PAX3 homeobox that cause Waardenburg syndrome type 1 in two families. American Journal of Human Genetics. 56: 75-83. PMID 7825605 |
0.246 |
|
| 2015 |
O'Leary NA, Wright MW, Brister JR, Ciufo S, Haddad D, McVeigh R, Rajput B, Robbertse B, Smith-White B, Ako-Adjei D, Astashyn A, Badretdin A, Bao Y, Blinkova O, Brover V, et al. Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation. Nucleic Acids Research. PMID 26553804 DOI: 10.1093/Nar/Gkv1189 |
0.237 |
|
| 2016 |
Adriaenssens EM, Krupovic M, Knezevic P, Ackermann HW, Barylski J, Brister JR, Clokie MR, Duffy S, Dutilh BE, Edwards RA, Enault F, Jang HB, Klumpp J, Kropinski AM, Lavigne R, et al. Taxonomy of prokaryotic viruses: 2016 update from the ICTV bacterial and archaeal viruses subcommittee. Archives of Virology. PMID 28040838 DOI: 10.1007/s00705-016-3173-4 |
0.232 |
|
| 2011 |
Klimke W, O'Donovan C, White O, Brister JR, Clark K, Fedorov B, Mizrachi I, Pruitt KD, Tatusova T. Solving the Problem: Genome Annotation Standards before the Data Deluge. Standards in Genomic Sciences. 5: 168-93. PMID 22180819 DOI: 10.4056/sigs.2084864 |
0.187 |
|
| 2019 |
Barylski J, Enault F, Dutilh BE, Schuller MBP, Edwards RA, Gillis A, Klumpp J, Knezevic P, Krupovic M, Kuhn JH, Lavigne R, Oksanen HM, Sullivan MB, Jang HB, Simmonds P, ... ... Brister JR, et al. Analysis of Spounaviruses as a Case Study for the Overdue Reclassification of Tailed Phages. Systematic Biology. PMID 31127947 DOI: 10.1093/Sysbio/Syz036 |
0.187 |
|
| 2019 |
Li J, Wang T, Evans JD, Rose R, Zhao Y, Li Z, Li J, Huang S, Heerman M, Rodríguez-García C, Banmekea O, Brister JR, Hatcher EL, Cao L, Hamilton M, et al. The Phylogeny and Pathogenesis of (SBV) Infection in European Honey Bees, . Viruses. 11. PMID 30646581 DOI: 10.3390/V11010061 |
0.177 |
|
| 2015 |
Ako-Adjei D, Fu W, Wallin C, Katz KS, Song G, Darji D, Brister JR, Ptak RG, Pruitt KD. HIV-1, human interaction database: current status and new features. Nucleic Acids Research. 43: D566-70. PMID 25378338 DOI: 10.1093/Nar/Gku1126 |
0.171 |
|
| 2019 |
Sayers EW, Beck J, Brister JR, Bolton EE, Canese K, Comeau DC, Funk K, Ketter A, Kim S, Kimchi A, Kitts PA, Kuznetsov A, Lathrop S, Lu Z, McGarvey K, et al. Database resources of the National Center for Biotechnology Information. Nucleic Acids Research. PMID 31602479 DOI: 10.1093/nar/gkz899 |
0.166 |
|
| 2011 |
Matthijnssens J, Ciarlet M, McDonald SM, Attoui H, Bányai K, Brister JR, Buesa J, Esona MD, Estes MK, Gentsch JR, Iturriza-Gómara M, Johne R, Kirkwood CD, Martella V, Mertens PP, et al. Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG). Archives of Virology. 156: 1397-413. PMID 21597953 DOI: 10.1007/S00705-011-1006-Z |
0.146 |
|
| 2017 |
Adriaenssens E, Brister JR. How to Name and Classify Your Phage: An Informal Guide. Viruses. 9. PMID 28368359 DOI: 10.3390/v9040070 |
0.142 |
|
| 2018 |
Sayers EW, Agarwala R, Bolton EE, Brister JR, Canese K, Clark K, Connor R, Fiorini N, Funk K, Hefferon T, Holmes JB, Kim S, Kimchi A, Kitts PA, Lathrop S, et al. Database resources of the National Center for Biotechnology Information. Nucleic Acids Research. PMID 30395293 DOI: 10.1093/nar/gky1069 |
0.126 |
|
| 2020 |
Sayers EW, Beck J, Bolton EE, Bourexis D, Brister JR, Canese K, Comeau DC, Funk K, Kim S, Klimke W, Marchler-Bauer A, Landrum M, Lathrop S, Lu Z, Madden TL, et al. Database resources of the National Center for Biotechnology Information. Nucleic Acids Research. PMID 33095870 DOI: 10.1093/nar/gkaa892 |
0.117 |
|
| 1994 |
Lalwani AK, Brister JR, Fex J, Grundfast KM, Pikus AT, Ploplis B, San Agustin T, Skarka H, Wilcox ER. A new nonsyndromic X-linked sensorineural hearing impairment linked to Xp21.2. American Journal of Human Genetics. 55: 685-94. PMID 7942846 |
0.037 |
|
| Hide low-probability matches. |