Charles W. Linkem, Ph.D. - Publications

Affiliations: 
2012 Ecology & Evolutionary Biology University of Kansas, Lawrence, KS, United States 
Area:
Herpetology, systematics

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Blair C, Bryson RW, Linkem CW, Lazcano D, Klicka J, McCormack JE. Cryptic diversity in the Mexican highlands: Thousands of UCE loci help illuminate phylogenetic relationships, species limits and divergence times of montane rattlesnakes (Viperidae: Crotalus). Molecular Ecology Resources. PMID 30565862 DOI: 10.1111/1755-0998.12970  0.58
2016 Sumarli A, Grismer LL, Wood PL, Ahmad AB, Rizal S, Ismail LH, Izam NA, Ahmad N, Linkem CW. The first riparian skink (Genus: Sphenomorphus Strauch, 1887) from Peninsular Malaysia and its relationship to other Indochinese and Sundaic species. Zootaxa. 4173: 29-44. PMID 27701201 DOI: 10.11646/Zootaxa.4173.1.3  0.537
2016 Geheber AD, Davis DR, Watters JL, Penrod ML, Feller KD, Davey CS, Ellsworth ED, Flanagan RL, Heitz BB, Moore T, Nguyen MD, Roberts A, Sutton J, Sanguila MB, Linkem CW, et al. Additions to Philippine Slender Skinks of the Brachymeles bonitae Complex (Reptilia: Squamata: Scincidae) I: a new species from Lubang Island. Zootaxa. 4132: 1-14. PMID 27395648 DOI: 10.11646/Zootaxa.4132.1.1  0.784
2016 Grismer LL, Muin MA, Wood PL, Anuar S, Linkem CW. The transfer of two clades of Malaysian Sphenomorphus Fitzinger (Squamata: Scincidae) into the genus Tytthoscincus Linkem, Diesmos, & Brown and the description of a new Malaysian swamp-dwelling species. Zootaxa. 4092: 231-242. PMID 27394452 DOI: 10.11646/Zootaxa.4092.2.6  0.575
2016 Leaché AD, Banbury BL, Linkem CW, de Oca AN. Phylogenomics of a rapid radiation: is chromosomal evolution linked to increased diversification in north american spiny lizards (Genus Sceloporus)? Bmc Evolutionary Biology. 16: 63. PMID 27000803 DOI: 10.1186/S12862-016-0628-X  0.373
2016 Linkem CW, Minin VN, Leaché AD. Detecting the anomaly zone in species trees and evidence for a misleading signal in higher-level skink phylogeny (Squamata: Scincidae). Systematic Biology. PMID 26738927 DOI: 10.1093/Sysbio/Syw001  0.604
2015 Leaché AD, Chavez AS, Jones LN, Grummer JA, Gottscho AD, Linkem CW. Phylogenomics of phrynosomatid lizards: conflicting signals from sequence capture versus restriction site associated DNA sequencing. Genome Biology and Evolution. 7: 706-19. PMID 25663487 DOI: 10.1093/Gbe/Evv026  0.458
2015 Leaché AD, Linkem CW. Phylogenomics of Horned Lizards (Genus: Phrynosoma) Using Targeted Sequence Capture Data Copeia. 103: 586-594. DOI: 10.1643/Ch-15-248  0.464
2014 Oaks JR, Linkem CW, Sukumaran J. Implications of uniformly distributed, empirically informed priors for phylogeographical model selection: a reply to Hickerson et al. Evolution; International Journal of Organic Evolution. 68: 3607-17. PMID 25213163 DOI: 10.1111/Evo.12523  0.669
2014 Siler CD, Linkem CW, Cobb K, Watters JL, Cummings ST, Diesmos AC, Brown RM. Taxonomic revision of the semi-aquatic skink Parvoscincus leucospilos (Reptilia: Squamata: Scincidae), with description of three new species. Zootaxa. 3847: 388-412. PMID 25112346 DOI: 10.11646/Zootaxa.3847.3.4  0.785
2014 Bryson RJ, Linkem CW, Dorcas ME, Lathrop A, Jones JM, Alvarado-Díaz J, Grünwald CI, Murphy RW. Multilocus species delimitation in the Crotalus triseriatus species group (Serpentes: Viperidae: Crotalinae), with the description of two new species. Zootaxa. 3826: 475-496. PMID 24990060 DOI: 10.11646/Zootaxa.3826.3.3  0.606
2014 Leaché AD, Wagner P, Linkem CW, Böhme W, Papenfuss TJ, Chong RA, Lavin BR, Bauer AM, Nielsen SV, Greenbaum E, Rödel MO, Schmitz A, LeBreton M, Ineich I, Chirio L, et al. A hybrid phylogenetic-phylogenomic approach for species tree estimation in African Agama lizards with applications to biogeography, character evolution, and diversification. Molecular Phylogenetics and Evolution. 79: 215-30. PMID 24973715 DOI: 10.1016/J.Ympev.2014.06.013  0.616
2013 Linkem CW, Brown RM. Systematic revision of the Parvoscincus decipiens (Boulenger, 1894) complex of Philippine forest skinks (Squamata: Scincidae: Lygosominae) with descriptions of seven new species. Zootaxa. 3700: 501-33. PMID 26106740 DOI: 10.11646/Zootaxa.3700.4.1  0.661
2013 Leaché AD, Harris RB, Maliska ME, Linkem CW. Comparative species divergence across eight triplets of spiny lizards (Sceloporus) using genomic sequence data. Genome Biology and Evolution. 5: 2410-9. PMID 24259316 DOI: 10.1093/Gbe/Evt186  0.498
2013 Oaks JR, Sukumaran J, Esselstyn JA, Linkem CW, Siler CD, Holder MT, Brown RM. Evidence for climate-driven diversification? A caution for interpreting ABC inferences of simultaneous historical events. Evolution; International Journal of Organic Evolution. 67: 991-1010. PMID 23550751 DOI: 10.1111/J.1558-5646.2012.01840.X  0.734
2013 Brown RM, Siler CD, Oliveros CH, Esselstyn JA, Diesmos AC, Hosner PA, Linkem CW, Barley AJ, Oaks JR, Sanguila MB, Welton LJ, Blackburn DC, Moyle RG, Townsend Peterson A, Alcala AC. Evolutionary processes of diversification in a model island archipelago Annual Review of Ecology, Evolution, and Systematics. 44: 411-435. DOI: 10.1146/Annurev-Ecolsys-110411-160323  0.73
2013 Linkem CW, Brown RM, Siler CD, Evans BJ, Austin CC, Iskandar DT, Diesmos AC, Supriatna J, Andayani N, Mcguire JA. Stochastic faunal exchanges drive diversification in widespread Wallacean and Pacific island lizards (Squamata: Scincidae: Lamprolepis smaragdina) Journal of Biogeography. 40: 507-520. DOI: 10.1111/Jbi.12022  0.774
2013 Welton LJ, Siler CD, Linkem CW, Diesmos AC, Diesmos ML, Sy E, Brown RM. Dragons in our midst: Phyloforensics of illegally traded Southeast Asian monitor lizards Biological Conservation. 159: 7-15. DOI: 10.1016/J.Biocon.2012.10.013  0.712
2012 Siler CD, Oaks JR, Welton LJ, Linkem CW, Swab JC, Diesmos AC, Brown RM. Did geckos ride the Palawan raft to the Philippines? Journal of Biogeography. 39: 1217-1234. DOI: 10.1111/J.1365-2699.2011.02680.X  0.803
2011 Linkem CW, Diesmos AC, Brown RM. Molecular systematics of the Philippine forest skinks (Squamata: Scincidae: ): testing morphological hypotheses of interspecific relationships. Zoological Journal of the Linnean Society. 163: 1217-1243. PMID 32336789 DOI: 10.1111/J.1096-3642.2011.00747.X  0.682
2011 Linkem CW, Diesmos AC, Brown RM. Molecular systematics of the Philippine forest skinks (Squamata: Scincidae: Sphenomorphus): Testing morphological hypotheses of interspecific relationships Zoological Journal of the Linnean Society. 163: 1217-1243. DOI: 10.1111/j.1096-3642.2011.00747.x  0.508
2010 Brown RM, Linkem CW, Siler CD, Sukumaran J, Esselstyn JA, Diesmos AC, Iskandar DT, Bickford D, Evans BJ, McGuire JA, Grismer L, Supriatna J, Andayani N. Phylogeography and historical demography of Polypedates leucomystax in the islands of Indonesia and the Philippines: evidence for recent human-mediated range expansion? Molecular Phylogenetics and Evolution. 57: 598-619. PMID 20601009 DOI: 10.1016/J.Ympev.2010.06.015  0.769
2010 Linkem CW, Hesed KM, Diesmos AC, Brown RM. Species boundaries and cryptic lineage diversity in a Philippine forest skink complex (Reptilia; Squamata; Scincidae: Lygosominae). Molecular Phylogenetics and Evolution. 56: 572-85. PMID 20403445 DOI: 10.1016/J.Ympev.2010.03.043  0.745
2010 Welton LJ, Siler CD, Linkem CW, Diesmos AC, Brown RM. Philippine bent-toed geckos of the cyrtodactylus agusanensis complex: Multilocus phylogeny, morphological diversity, and descriptions of three new species Herpetological Monographs. 24: 55-85. DOI: 10.1655/Herpmonographs-D-10-00005.1  0.767
2010 Linkem CW, Diesmos AC, Brown RM. A new species of scincid lizard (Genus Sphenomorphus) from Palawan Island, Philippines Herpetologica. 66: 67-79. DOI: 10.1655/08-074.1  0.708
2010 Linkem CW, Siler CD, Diesmos AC, Sy E, Brown RM. A new species of Gekko (squamata: gekkonidae) from central Luzon Island, Philippines Zootaxa. 37-49. DOI: 10.11646/Zootaxa.2396.1.3  0.78
2010 Siler CD, Diesmos AC, Linkem CW, Diesmos ML, Brown RM. A new species of limestone-forest frog, Genus platymantis (Amphibia: Anura: Ceratobatrachidae) from central luzon Island, Philippines Zootaxa. 49-63.  0.751
2009 Sukumaran J, Linkem CW. Choice of topology estimators in Bayesian phylogenetic analysis. Molecular Biology and Evolution. 26: 1-3. PMID 18984901 DOI: 10.1093/Molbev/Msn250  0.695
2008 Linkem CW, McGuire JA, Hayden CJ, Setiadi MI, Bickford DP, Brown RM. A new species of bent-toe gecko (Gekkonidae: Cyrtodactylus) from Sulawesi Island, Eastern Indonesia Herpetologica. 64: 224-234. DOI: 10.1655/07-040.1  0.711
2008 Hayden CJ, Brown RM, Gillespie G, Setiadi MI, Linkem CW, Iskandar DT, Umilaela, Bickford DP, Riyanto A, Mumpuni, McGuire JA. A new species of bent-toed gecko Cyrtodactylus gray, 1827, (Squamata: Gekkonidae) from the Island of Sulawesi, Indonesia Herpetologica. 64: 109-120. DOI: 10.1655/07-026.1  0.651
2007 McGuire JA, Linkem CW, Koo MS, Hutchison DW, Lappin AK, Orange DI, Lemos-Espinal J, Riddle BR, Jaeger JR. Mitochondrial introgression and incomplete lineage sorting through space and time: phylogenetics of crotaphytid lizards. Evolution; International Journal of Organic Evolution. 61: 2879-97. PMID 17941840 DOI: 10.1111/J.1558-5646.2007.00239.X  0.485
2007 Siler CD, Linkem CW, Diesmos AC, Alcala AC. A new species of Platymantis (Amphibia: Anura: Ranidae) from Panay Island, Philippines Herpetologica. 63: 351-364. DOI: 10.1655/0018-0831(2007)63[351:Ansopa]2.0.Co;2  0.714
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