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Jeffrey J. Tabor, Ph.D. - Publications

Affiliations: 
2006 Cell and Molecular Biology University of Texas at Austin, Austin, Texas, U.S.A. 
Area:
Molecular Biology
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40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Lazar JT, Tabor JJ. Bacterial two-component systems as sensors for synthetic biology applications. Current Opinion in Systems Biology. 28. PMID 34917859 DOI: 10.1016/j.coisb.2021.100398  0.321
2021 Baig H, Fontanarossa P, Kulkarni V, McLaughlin J, Vaidyanathan P, Bartley B, Bhakta S, Bhatia S, Bissell M, Clancy K, Cox RS, Goñi Moreno A, Gorochowski T, Grunberg R, Lee J, ... ... Tabor JJ, et al. Synthetic biology open language visual (SBOL Visual) version 2.3. Journal of Integrative Bioinformatics. PMID 34098590 DOI: 10.1515/jib-2020-0045  0.488
2020 Sexton JT, Tabor JJ. Multiplexing cell-cell communication. Molecular Systems Biology. 16: e9618. PMID 32672881 DOI: 10.15252/Msb.20209618  0.37
2020 Baig H, Fontanarossa P, Kulkarni V, McLaughlin J, Vaidyanathan P, Bartley B, Bhatia S, Bhakta S, Bissell M, Clancy K, Cox RS, Moreno AG, Gorochowski T, Grunberg R, Luna A, ... ... Tabor JJ, et al. Synthetic biology open language visual (SBOL visual) version 2.2. Journal of Integrative Bioinformatics. PMID 32543457 DOI: 10.1515/jib-2020-0014  0.501
2019 Hörner M, Gerhardt K, Salavei P, Hoess P, Härrer D, Kaiser J, Tabor JJ, Weber W. Production of phytochromes by high cell density E. coli fermentation. Acs Synthetic Biology. PMID 31526004 DOI: 10.1021/Acssynbio.9B00267  0.343
2019 Gerhardt KP, Castillo-Hair SM, Tabor JJ. DIY optogenetics: Building, programming, and using the Light Plate Apparatus. Methods in Enzymology. 624: 197-226. PMID 31370930 DOI: 10.1016/Bs.Mie.2019.04.018  0.405
2019 Beal J, Nguyen T, Gorochowski TE, Goñi-Moreno A, Scott-Brown J, McLaughlin JA, Madsen C, Aleritsch B, Bartley B, Bhakta S, Bissell M, Castillo-Hair SM, Clancy K, Luna A, Le Novere N, ... ... Tabor JJ, et al. Communicating Structure and Function in Synthetic Biology Diagrams. Acs Synthetic Biology. PMID 31348656 DOI: 10.1021/Acssynbio.9B00139  0.548
2019 Castillo-Hair SM, Baerman EA, Fujita M, Igoshin OA, Tabor JJ. Optogenetic control of Bacillus subtilis gene expression. Nature Communications. 10: 3099. PMID 31308373 DOI: 10.1038/S41467-019-10906-6  0.429
2019 Madsen C, Goni Moreno A, Palchick Z, P U, Roehner N, Bartley B, Bhatia S, Bhakta S, Bissell M, Clancy K, Cox RS, Gorochowski T, Grunberg R, Luna A, McLaughlin J, ... ... Tabor JJ, et al. Synthetic Biology Open Language Visual (SBOL Visual) Version 2.1. Journal of Integrative Bioinformatics. PMID 31199768 DOI: 10.1515/jib-2018-0101  0.502
2019 Schmidl SR, Ekness F, Sofjan K, Daeffler KN, Brink KR, Landry BP, Gerhardt KP, Dyulgyarov N, Sheth RU, Tabor JJ. Rewiring bacterial two-component systems by modular DNA-binding domain swapping. Nature Chemical Biology. PMID 31110305 DOI: 10.1038/S41589-019-0286-6  0.384
2018 Landry BP, Palanki R, Dyulgyarov N, Hartsough LA, Tabor JJ. Phosphatase activity tunes two-component system sensor detection threshold. Nature Communications. 9: 1433. PMID 29650958 DOI: 10.1038/S41467-018-03929-Y  0.411
2018 Cox RS, Madsen C, McLaughlin J, Nguyen T, Roehner N, Bartley B, Bhatia S, Bissell M, Clancy K, Gorochowski T, Grünberg R, Luna A, Le Novere N, Pocock M, Sauro H, ... ... Tabor JJ, et al. Synthetic Biology Open Language Visual (SBOL Visual) Version 2.0. Journal of Integrative Bioinformatics. PMID 29549707 DOI: 10.1515/Jib-2017-0074  0.543
2018 Ong NTX, Tabor JJ. A miniaturized E. coli green light sensor with high dynamic range. Chembiochem : a European Journal of Chemical Biology. PMID 29420866 DOI: 10.1002/Cbic.201800007  0.484
2017 Ong NTX, Olson EJ, Tabor JJ. Engineering an E. coli near-infrared light sensor. Acs Synthetic Biology. PMID 29091422 DOI: 10.1021/Acssynbio.7B00289  0.466
2017 Landry BP, Tabor JJ. Engineering Diagnostic and Therapeutic Gut Bacteria. Microbiology Spectrum. 5. PMID 29052539 DOI: 10.1128/Microbiolspec.Bad-0020-2017  0.397
2017 Olson EJ, Tzouanas CN, Tabor JJ. A photoconversion model for full spectral programming and multiplexing of optogenetic systems. Molecular Systems Biology. 13: 926. PMID 28438832 DOI: 10.15252/Msb.20167456  0.454
2017 Daeffler KN, Galley JD, Sheth RU, Ortiz-Velez LC, Bibb CO, Shroyer NF, Britton RA, Tabor JJ. Engineering bacterial thiosulfate and tetrathionate sensors for detecting gut inflammation. Molecular Systems Biology. 13: 923. PMID 28373240 DOI: 10.15252/Msb.20167416  0.392
2016 Gerhardt KP, Olson EJ, Castillo-Hair SM, Hartsough LA, Landry BP, Ekness F, Yokoo R, Gomez EJ, Ramakrishnan P, Suh J, Savage DF, Tabor JJ. An open-hardware platform for optogenetics and photobiology. Scientific Reports. 6: 35363. PMID 27805047 DOI: 10.1038/Srep35363  0.454
2016 Ramakrishnan P, Tabor JJ. Repurposing Synechocystis PCC6803 UirS-UirR as a UV-violet/green photoreversible transcriptional regulatory tool in E. coli. Acs Synthetic Biology. PMID 27120220 DOI: 10.1021/Acssynbio.6B00068  0.482
2015 Gomez EJ, Gerhardt K, Judd J, Tabor JJ, Suh J. Light-Activated Nuclear Translocation of Adeno-Associated Virus Nanoparticles Using Phytochrome B for Enhanced, Tunable, and Spatially Programmable Gene Delivery. Acs Nano. PMID 26618393 DOI: 10.1021/Acsnano.5B05558  0.412
2015 Castillo-Hair SM, Igoshin OA, Tabor JJ. How to train your microbe: methods for dynamically characterizing gene networks. Current Opinion in Microbiology. 24: 113-23. PMID 25677419 DOI: 10.1016/J.Mib.2015.01.008  0.326
2014 Schmidl SR, Sheth RU, Wu A, Tabor JJ. Refactoring and optimization of light-switchable Escherichia coli two-component systems. Acs Synthetic Biology. 3: 820-31. PMID 25250630 DOI: 10.1021/Sb500273N  0.533
2014 Olson EJ, Tabor JJ. Optogenetic characterization methods overcome key challenges in synthetic and systems biology. Nature Chemical Biology. 10: 502-11. PMID 24937068 DOI: 10.1038/Nchembio.1559  0.359
2014 Olson EJ, Hartsough LA, Landry BP, Shroff R, Tabor JJ. Characterizing bacterial gene circuit dynamics with optically programmed gene expression signals. Nature Methods. 11: 449-55. PMID 24608181 DOI: 10.1038/Nmeth.2884  0.419
2014 Lee EJ, Tabor JJ, Mikos AG. Leveraging synthetic biology for tissue engineering applications Inflammation and Regeneration. 34: 015-022. DOI: 10.2492/Inflammregen.34.015  0.328
2012 Tabor JJ. Modular gene-circuit design takes two steps forward. Nature Methods. 9: 1061-3. PMID 23132116 DOI: 10.1038/Nmeth.2217  0.309
2012 Olson EJ, Tabor JJ. Post-translational tools expand the scope of synthetic biology. Current Opinion in Chemical Biology. 16: 300-6. PMID 22766485 DOI: 10.1016/J.Cbpa.2012.06.003  0.372
2011 Tabor JJ. Plate-based assays for light-regulated gene expression systems. Methods in Enzymology. 497: 373-91. PMID 21601094 DOI: 10.1016/B978-0-12-385075-1.00015-9  0.531
2011 Tamsir A, Tabor JJ, Voigt CA. Robust multicellular computing using genetically encoded NOR gates and chemical 'wires'. Nature. 469: 212-5. PMID 21150903 DOI: 10.1038/Nature09565  0.737
2011 Tabor JJ, Levskaya A, Voigt CA. Multichromatic control of gene expression in Escherichia coli. Journal of Molecular Biology. 405: 315-24. PMID 21035461 DOI: 10.1016/J.Jmb.2010.10.038  0.739
2009 Tabor JJ, Salis HM, Simpson ZB, Chevalier AA, Levskaya A, Marcotte EM, Voigt CA, Ellington AD. A synthetic genetic edge detection program. Cell. 137: 1272-81. PMID 19563759 DOI: 10.1016/J.Cell.2009.04.048  0.686
2009 Tabor JJ, Groban ES, Voigt CA. Performance characteristics for sensors and circuits used to program E. coli Systems Biology and Biotechnology of Escherichia Coli. 401-439. DOI: 10.1007/978-1-4020-9394-4_19  0.735
2008 Tabor JJ, Bayer TS, Simpson ZB, Levy M, Ellington AD. Engineering stochasticity in gene expression. Molecular Biosystems. 4: 754-61. PMID 18563250 DOI: 10.1039/B801245H  0.596
2007 Tabor JJ. Programming living cells to function as massively parallel computers Proceedings - Design Automation Conference. 638-639. DOI: 10.1109/DAC.2007.375243  0.352
2006 Tabor JJ, Davidson EA, Ellington AD. Developing RNA tools for engineered regulatory systems. Biotechnology & Genetic Engineering Reviews. 22: 21-44. PMID 18476324 DOI: 10.1080/02648725.2006.10648063  0.448
2006 Tabor JJ, Levy M, Ellington AD. Deoxyribozymes that recode sequence information. Nucleic Acids Research. 34: 2166-72. PMID 16648360 DOI: 10.1093/Nar/Gkl176  0.582
2006 Levy M, Tabor J, Wong S. Taking pictures with E. coli: signal processing using synthetic biology Ieee Signal Processing Magazine. 23: 144-142. DOI: 10.1109/Msp.2006.1628897  0.564
2006 Levy M, Tabor JJ, Wong STC. Taking pictures with E. coli: Signal processing using synthetic biology Ieee Signal Processing Magazine. 23: 144+141-142.  0.305
2005 Levskaya A, Chevalier AA, Tabor JJ, Simpson ZB, Lavery LA, Levy M, Davidson EA, Scouras A, Ellington AD, Marcotte EM, Voigt CA. Synthetic biology: engineering Escherichia coli to see light. Nature. 438: 441-2. PMID 16306980 DOI: 10.1038/Nature04405  0.709
2003 Tabor JJ, Ellington AD. Playing to win at DNA computation. Nature Biotechnology. 21: 1013-5. PMID 12949563 DOI: 10.1038/Nbt0903-1013  0.414
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