| Year |
Citation |
Score |
| 2023 |
Romero MA, Pyle AD. 'Enhancing' skeletal muscle and stem cells in three-dimensional: genome regulation of skeletal muscle in development and disease. Current Opinion in Genetics & Development. 83: 102133. PMID 37951138 DOI: 10.1016/j.gde.2023.102133 |
0.376 |
|
| 2023 |
Hicks MR, Saleh KK, Clock B, Gibbs DE, Yang M, Younesi S, Gane L, Gutierrez-Garcia V, Xi H, Pyle AD. Regenerating human skeletal muscle forms an emerging niche in vivo to support PAX7 cells. Nature Cell Biology. PMID 37919520 DOI: 10.1038/s41556-023-01271-0 |
0.491 |
|
| 2023 |
Jaime OG, Arias J, Pavani S, Pyle AD, Hicks MR. SIX1+PAX3+ identify a progenitor for myogenic lineage commitment from hPSCs. Development (Cambridge, England). PMID 37366057 DOI: 10.1242/dev.201509 |
0.41 |
|
| 2023 |
Stearns-Reider KM, Hicks MR, Hammond KG, Reynolds JC, Maity A, Kurmangaliyev YZ, Chin J, Stieg AZ, Geisse NA, Hohlbauch S, Kaemmer S, Schmitt LR, Pham TT, Yamauchi K, Novitch BG, ... ... Pyle AD, et al. Myoscaffolds reveal laminin scarring is detrimental for stem cell function while sarcospan induces compensatory fibrosis. Npj Regenerative Medicine. 8: 16. PMID 36922514 DOI: 10.1038/s41536-023-00287-2 |
0.345 |
|
| 2022 |
Wei Y, Qin Q, Yan C, Hayes MN, Garcia SP, Xi H, Do D, Jin AH, Eng TC, McCarthy KM, Adhikari A, Onozato ML, Spentzos D, Neilsen GP, Iafrate AJ, ... ... Pyle AD, et al. Single-cell analysis and functional characterization uncover the stem cell hierarchies and developmental origins of rhabdomyosarcoma. Nature Cancer. PMID 35982179 DOI: 10.1038/s43018-022-00414-w |
0.394 |
|
| 2022 |
Hicks MR, Pyle AD. The emergence of the stem cell niche. Trends in Cell Biology. PMID 35934562 DOI: 10.1016/j.tcb.2022.07.003 |
0.508 |
|
| 2022 |
Chien P, Xi H, Pyle AD. Recapitulating human myogenesis ex vivo using human pluripotent stem cells. Experimental Cell Research. 411: 112990. PMID 34973262 DOI: 10.1016/j.yexcr.2021.112990 |
0.511 |
|
| 2021 |
Nitzahn M, Truong B, Khoja S, Vega-Crespo A, Le C, Eliav A, Makris G, Pyle AD, Häberle J, Lipshutz GS. CRISPR-Mediated Genomic Addition to CPS1 Deficient iPSCs is Insufficient to Restore Nitrogen Homeostasis. The Yale Journal of Biology and Medicine. 94: 545-557. PMID 34970092 |
0.486 |
|
| 2021 |
Petrigliano FA, Liu NQ, Lee S, Tassey J, Sarkar A, Lin Y, Li L, Yu Y, Geng D, Zhang J, Shkhyan R, Bogdanov J, Van Handel B, Ferguson GB, Lee Y, ... ... Pyle AD, et al. Long-term repair of porcine articular cartilage using cryopreservable, clinically compatible human embryonic stem cell-derived chondrocytes. Npj Regenerative Medicine. 6: 77. PMID 34815400 DOI: 10.1038/s41536-021-00187-3 |
0.316 |
|
| 2020 |
Xi H, Young CS, Pyle AD. Generation of PAX7 Reporter Cells to Investigate Skeletal Myogenesis from Human Pluripotent Stem Cells. Star Protocols. 1: 100158. PMID 33377052 DOI: 10.1016/j.xpro.2020.100158 |
0.494 |
|
| 2020 |
Sengupta K, Mishra MK, Loro E, Spencer MJ, Pyle AD, Khurana TS. Genome Editing-Mediated Utrophin Upregulation in Duchenne Muscular Dystrophy Stem Cells. Molecular Therapy. Nucleic Acids. 22: 500-509. PMID 33230452 DOI: 10.1016/J.Omtn.2020.08.031 |
0.309 |
|
| 2020 |
Xi H, Langerman J, Sabri S, Chien P, Young CS, Younesi S, Hicks M, Gonzalez K, Fujiwara W, Marzi J, Liebscher S, Spencer M, Van Handel B, Evseenko D, Schenke-Layland K, ... ... Pyle AD, et al. A Human Skeletal Muscle Atlas Identifies the Trajectories of Stem and Progenitor Cells across Development and from Human Pluripotent Stem Cells. Cell Stem Cell. 27: 181-185. PMID 32619514 DOI: 10.1016/j.stem.2020.06.006 |
0.506 |
|
| 2020 |
Xi H, Langerman J, Sabri S, Chien P, Young CS, Younesi S, Hicks M, Gonzalez K, Fujiwara W, Marzi J, Liebscher S, Spencer M, Van Handel B, Evseenko D, Schenke-Layland K, ... ... Pyle AD, et al. A Human Skeletal Muscle Atlas Identifies the Trajectories of Stem and Progenitor Cells across Development and from Human Pluripotent Stem Cells. Cell Stem Cell. PMID 32396864 DOI: 10.1016/J.Stem.2020.04.017 |
0.57 |
|
| 2019 |
Mosich GM, Husman R, Shah P, Sharma A, Ressadeh K, Aderibigbe T, Hu VJ, McClintick DJ, Wu G, Gatto JD, Xi H, Pyle AD, Péault B, Petrigliano FA, Dar A. Non-fibro-adipogenic pericytes from human embryonic stem cells attenuate degeneration of the chronically injured mouse muscle. Jci Insight. 4. PMID 31852842 DOI: 10.1172/Jci.Insight.125334 |
0.446 |
|
| 2019 |
Xi H, Pyle A. Beyond the genome: RNA control of stem cells. Science (New York, N.Y.). 366: 684-685. PMID 31699921 DOI: 10.1126/Science.Aaz4859 |
0.426 |
|
| 2019 |
Bellmann J, Goswami RY, Girardo S, Rein N, Hosseinzadeh Z, Hicks MR, Busskamp V, Pyle AD, Werner C, Sterneckert J. A customizable microfluidic platform for medium-throughput modeling of neuromuscular circuits. Biomaterials. 225: 119537. PMID 31614290 DOI: 10.1016/J.Biomaterials.2019.119537 |
0.454 |
|
| 2019 |
Hazim RA, Karumbayaram S, Jiang M, Dimashkie A, Lopes VS, Li D, Burgess BL, Vijayaraj P, Alva-Ornelas JA, Zack JA, Kohn DB, Gomperts BN, Pyle AD, Lowry WE, Williams DS. Correction to: Differentiation of RPE cells from integration-free iPS cells and their cell biological characterization. Stem Cell Research & Therapy. 10: 52. PMID 30755264 DOI: 10.1186/S13287-019-1147-7 |
0.409 |
|
| 2018 |
Ferguson GB, Van Handel B, Bay M, Fiziev P, Org T, Lee S, Shkhyan R, Banks NW, Scheinberg M, Wu L, Saitta B, Elphingstone J, Larson AN, Riester SM, Pyle AD, et al. Mapping molecular landmarks of human skeletal ontogeny and pluripotent stem cell-derived articular chondrocytes. Nature Communications. 9: 3634. PMID 30194383 DOI: 10.1038/S41467-018-05573-Y |
0.502 |
|
| 2017 |
Hicks MR, Hiserodt J, Paras K, Fujiwara W, Eskin A, Jan M, Xi H, Young CS, Evseenko D, Nelson SF, Spencer MJ, Handel BV, Pyle AD. ERBB3 and NGFR mark a distinct skeletal muscle progenitor cell in human development and hPSCs. Nature Cell Biology. PMID 29255171 DOI: 10.1038/S41556-017-0010-2 |
0.561 |
|
| 2017 |
Hazim RA, Karumbayaram S, Jiang M, Dimashkie A, Lopes VS, Li D, Burgess BL, Vijayaraj P, Alva-Ornelas JA, Zack JA, Kohn DB, Gomperts BN, Pyle AD, Lowry WE, Williams DS. Differentiation of RPE cells from integration-free iPS cells and their cell biological characterization. Stem Cell Research & Therapy. 8: 217. PMID 28969679 DOI: 10.1186/S13287-017-0652-9 |
0.5 |
|
| 2017 |
Young CS, Mokhonova E, Quinonez M, Pyle AD, Spencer MJ. Creation of a Novel Humanized Dystrophic Mouse Model of Duchenne Muscular Dystrophy and Application of a CRISPR/Cas9 Gene Editing Therapy. Journal of Neuromuscular Diseases. PMID 28505980 DOI: 10.3233/Jnd-170218 |
0.336 |
|
| 2017 |
Xi H, Fujiwara W, Gonzalez K, Jan M, Liebscher S, Van Handel B, Schenke-Layland K, Pyle AD. In Vivo Human Somitogenesis Guides Somite Development from hPSCs. Cell Reports. 18: 1573-1585. PMID 28178531 DOI: 10.1016/J.Celrep.2017.01.040 |
0.528 |
|
| 2016 |
Lee PC, Truong B, Vega-Crespo A, Gilmore WB, Hermann K, Angarita SA, Tang JK, Chang KM, Wininger AE, Lam AK, Schoenberg BE, Cederbaum SD, Pyle AD, Byrne JA, Lipshutz GS. Restoring Ureagenesis in Hepatocytes by CRISPR/Cas9-mediated Genomic Addition to Arginase-deficient Induced Pluripotent Stem Cells. Molecular Therapy. Nucleic Acids. 5: e394. PMID 28131247 DOI: 10.1038/mtna.2016.98 |
0.469 |
|
| 2016 |
Lee PC, Truong B, Vega-Crespo A, Gilmore WB, Hermann K, Angarita SA, Tang JK, Chang KM, Wininger AE, Lam AK, Schoenberg BE, Cederbaum SD, Pyle AD, Byrne JA, Lipshutz GS. Restoring Ureagenesis in Hepatocytes by CRISPR/Cas9-mediated Genomic Addition to Arginase-deficient Induced Pluripotent Stem Cells. Molecular Therapy. Nucleic Acids. 5: e394. PMID 27898091 DOI: 10.1038/Mtna.2016.98 |
0.554 |
|
| 2016 |
Young CS, Hicks MR, Ermolova NV, Nakano H, Jan M, Younesi S, Karumbayaram S, Kumagai-Cresse C, Wang D, Zack JA, Kohn DB, Nakano A, Nelson SF, Miceli MC, Spencer MJ, ... Pyle AD, et al. A Single CRISPR-Cas9 Deletion Strategy that Targets the Majority of DMD Patients Restores Dystrophin Function in hiPSC-Derived Muscle Cells. Cell Stem Cell. PMID 26877224 DOI: 10.1016/J.Stem.2016.01.021 |
0.364 |
|
| 2016 |
Young CS, Hicks MR, Ermolova NV, Nakano H, Jan M, Younesi S, Nakano A, Nelson SF, Miceli MC, Spencer MJ, Pyle AD. 735. Functional Restoration of Dystrophin Protein in HiPSC-Derived Skeletal Myotubes and Cardiomyocytes After CRISPR/Cas9-Mediated Deletion of 530-725kb of DMD Molecular Therapy. 24: S290. DOI: 10.1016/S1525-0016(16)33543-2 |
0.425 |
|
| 2015 |
Thakore-Shah K, Koleilat T, Jan M, John A, Pyle AD. REST/NRSF Knockdown Alters Survival, Lineage Differentiation and Signaling in Human Embryonic Stem Cells. Plos One. 10: e0145280. PMID 26690059 DOI: 10.1371/Journal.Pone.0145280 |
0.759 |
|
| 2015 |
Hicks M, Pyle A. The Path from Pluripotency to Skeletal Muscle: Developmental Myogenesis Guides the Way. Cell Stem Cell. 17: 255-7. PMID 26340524 DOI: 10.1016/J.Stem.2015.08.017 |
0.505 |
|
| 2015 |
Hou S, Choi JS, Chen KJ, Zhang Y, Peng J, Garcia MA, Yu JH, Thakore-Shah K, Ro T, Chen JF, Peyda P, Fan G, Pyle AD, Wang H, Tseng HR. Supramolecular nanosubstrate-mediated delivery for reprogramming and transdifferentiation of Mammalian cells. Small (Weinheim An Der Bergstrasse, Germany). 11: 2499-504. PMID 25613059 DOI: 10.1002/Smll.201402602 |
0.742 |
|
| 2014 |
Peng J, Garcia MA, Choi JS, Zhao L, Chen KJ, Bernstein JR, Peyda P, Hsiao YS, Liu KW, Lin WY, Pyle AD, Wang H, Hou S, Tseng HR. Molecular recognition enables nanosubstrate-mediated delivery of gene-encapsulated nanoparticles with high efficiency. Acs Nano. 8: 4621-9. PMID 24708312 DOI: 10.1021/Nn5003024 |
0.317 |
|
| 2013 |
Jonas SJ, Alva JA, Richardson W, Sherman SP, Galic Z, Pyle AD, Dunn B. A spatially and chemically defined platform for the uniform growth of human pluripotent stem cells. Materials Science & Engineering. C, Materials For Biological Applications. 33: 234-41. PMID 25428067 DOI: 10.1016/J.Msec.2012.08.035 |
0.79 |
|
| 2013 |
Awe JP, Lee PC, Ramathal C, Vega-Crespo A, Durruthy-Durruthy J, Cooper A, Karumbayaram S, Lowry WE, Clark AT, Zack JA, Sebastiano V, Kohn DB, Pyle AD, Martin MG, Lipshutz GS, et al. Generation and characterization of transgene-free human induced pluripotent stem cells and conversion to putative clinical-grade status. Stem Cell Research & Therapy. 4: 87. PMID 23890092 DOI: 10.1186/Scrt246 |
0.549 |
|
| 2013 |
Sherman SP, Pyle AD. Small molecule screening with laser cytometry can be used to identify pro-survival molecules in human embryonic stem cells. Plos One. 8: e54948. PMID 23383009 DOI: 10.1371/Journal.Pone.0054948 |
0.811 |
|
| 2013 |
Tran T, Andersen R, Sherman SP, Pyle AD. Insights into skeletal muscle development and applications in regenerative medicine. International Review of Cell and Molecular Biology. 300: 51-83. PMID 23273859 DOI: 10.1016/B978-0-12-405210-9.00002-3 |
0.765 |
|
| 2013 |
Palomares K, Vigant F, Van Handel B, Pernet O, Chikere K, Hong P, Sherman SP, Patterson M, An DS, Lowry WE, Mikkola HK, Morizono K, Pyle AD, Lee B. Nipah virus envelope-pseudotyped lentiviruses efficiently target ephrinB2-positive stem cell populations in vitro and bypass the liver sink when administered in vivo. Journal of Virology. 87: 2094-108. PMID 23192877 DOI: 10.1128/Jvi.02032-12 |
0.777 |
|
| 2013 |
Yanes RE, Tarn D, Hwang AA, Ferris DP, Sherman SP, Thomas CR, Lu J, Pyle AD, Zink JI, Tamanoi F. Involvement of lysosomal exocytosis in the excretion of mesoporous silica nanoparticles and enhancement of the drug delivery effect by exocytosis inhibition. Small (Weinheim An Der Bergstrasse, Germany). 9: 697-704. PMID 23152124 DOI: 10.1002/Smll.201201811 |
0.708 |
|
| 2013 |
Palomares K, Vigant F, Handel BV, Pernet O, Chikere K, Hong P, Sherman SP, Patterson M, An DS, Lowry WE, Mikkola HKA, Morizono K, Pyle AD, Lee B. Authors correction to Nipah virus envelope-pseudotyped lentiviruses efficiently target ephrinb2-positive stem cell populations In vitro and bypass the liver sink when administered In vivo [Journal of Virology, 87, 4, (2013) 2094 2108] Journal of Virology. 87: 4794. DOI: 10.1128/JVI.00279-13 |
0.76 |
|
| 2012 |
Karumbayaram S, Lee P, Azghadi SF, Cooper AR, Patterson M, Kohn DB, Pyle A, Clark A, Byrne J, Zack JA, Plath K, Lowry WE. From skin biopsy to neurons through a pluripotent intermediate under Good Manufacturing Practice protocols. Stem Cells Translational Medicine. 1: 36-43. PMID 23197638 DOI: 10.5966/Sctm.2011-0001 |
0.504 |
|
| 2011 |
Alva JA, Lee GE, Escobar EE, Pyle AD. Phosphatase and tensin homolog regulates the pluripotent state and lineage fate choice in human embryonic stem cells. Stem Cells (Dayton, Ohio). 29: 1952-62. PMID 21948699 DOI: 10.1002/Stem.748 |
0.563 |
|
| 2011 |
Sherman SP, Alva JA, Thakore-Shah K, Pyle AD. Human pluripotent stem cells: the development of high-content screening strategies. Methods in Molecular Biology (Clifton, N.J.). 767: 283-95. PMID 21822883 DOI: 10.1007/978-1-61779-201-4_21 |
0.721 |
|
| 2011 |
Le Belle JE, Orozco NM, Paucar AA, Saxe JP, Mottahedeh J, Pyle AD, Wu H, Kornblum HI. Proliferative neural stem cells have high endogenous ROS levels that regulate self-renewal and neurogenesis in a PI3K/Akt-dependant manner. Cell Stem Cell. 8: 59-71. PMID 21211782 DOI: 10.1016/J.Stem.2010.11.028 |
0.497 |
|
| 2011 |
Kamei Ki, Ohashi M, Graham NA, Chen Y, Clark AT, Witte ON, Graeber TG, Pyle AD, Tseng HR. Quantitative cytological feature analysis by microfluidic image cytometry reveals phenotypic differences among human pluripotent stem cell lines 15th International Conference On Miniaturized Systems For Chemistry and Life Sciences 2011, Microtas 2011. 1: 148-150. |
0.407 |
|
| 2010 |
Tchieu J, Kuoy E, Chin MH, Trinh H, Patterson M, Sherman SP, Aimiuwu O, Lindgren A, Hakimian S, Zack JA, Clark AT, Pyle AD, Lowry WE, Plath K. Female human iPSCs retain an inactive X chromosome. Cell Stem Cell. 7: 329-42. PMID 20727844 DOI: 10.1016/J.Stem.2010.06.024 |
0.771 |
|
| 2010 |
Tseng HC, Arasteh A, Paranjpe A, Teruel A, Yang W, Behel A, Alva JA, Walter G, Head C, Ishikawa TO, Herschman HR, Cacalano N, Pyle AD, Park NH, Jewett A. Increased lysis of stem cells but not their differentiated cells by natural killer cells; de-differentiation or reprogramming activates NK cells. Plos One. 5: e11590. PMID 20661281 DOI: 10.1371/Journal.Pone.0011590 |
0.591 |
|
| 2010 |
Kamei K, Ohashi M, Gschweng E, Ho Q, Suh J, Tang J, For Yu ZT, Clark AT, Pyle AD, Teitell MA, Lee KB, Witte ON, Tseng HR. Microfluidic image cytometry for quantitative single-cell profiling of human pluripotent stem cells in chemically defined conditions. Lab On a Chip. 10: 1113-9. PMID 20390128 DOI: 10.1039/B922884E |
0.463 |
|
| 2009 |
Zeng W, de Greef JC, Chen YY, Chien R, Kong X, Gregson HC, Winokur ST, Pyle A, Robertson KD, Schmiesing JA, Kimonis VE, Balog J, Frants RR, Ball AR, Lock LF, et al. Specific loss of histone H3 lysine 9 trimethylation and HP1gamma/cohesin binding at D4Z4 repeats is associated with facioscapulohumeral dystrophy (FSHD). Plos Genetics. 5: e1000559. PMID 19593370 DOI: 10.1371/Journal.Pgen.1000559 |
0.333 |
|
| 2009 |
Chin MH, Mason MJ, Xie W, Volinia S, Singer M, Peterson C, Ambartsumyan G, Aimiuwu O, Richter L, Zhang J, Khvorostov I, Ott V, Grunstein M, Lavon N, Benvenisty N, ... ... Pyle AD, et al. Induced pluripotent stem cells and embryonic stem cells are distinguished by gene expression signatures. Cell Stem Cell. 5: 111-23. PMID 19570518 DOI: 10.1016/J.Stem.2009.06.008 |
0.525 |
|
| 2009 |
Conway AE, Lindgren A, Galic Z, Pyle AD, Wu H, Zack JA, Pelligrini M, Teitell MA, Clark AT. A self-renewal program controls the expansion of genetically unstable cancer stem cells in pluripotent stem cell-derived tumors. Stem Cells (Dayton, Ohio). 27: 18-28. PMID 19224508 DOI: 10.1634/Stemcells.2008-0529 |
0.505 |
|
| 2009 |
Damoiseaux R, Sherman SP, Alva JA, Peterson C, Pyle AD. Integrated chemical genomics reveals modifiers of survival in human embryonic stem cells. Stem Cells (Dayton, Ohio). 27: 533-42. PMID 19074420 DOI: 10.1634/Stemcells.2008-0596 |
0.804 |
|
| 2008 |
Wu H, Kim KJ, Mehta K, Paxia S, Sundstrom A, Anantharaman T, Kuraishy AI, Doan T, Ghosh J, Pyle AD, Clark A, Lowry W, Fan G, Baxter T, Mishra B, et al. Copy number variant analysis of human embryonic stem cells. Stem Cells (Dayton, Ohio). 26: 1484-9. PMID 18369100 DOI: 10.1634/Stemcells.2007-0993 |
0.461 |
|
| 2008 |
Hohenstein KA, Pyle AD, Chern JY, Lock LF, Donovan PJ. Nucleofection mediates high-efficiency stable gene knockdown and transgene expression in human embryonic stem cells. Stem Cells (Dayton, Ohio). 26: 1436-43. PMID 18323409 DOI: 10.1634/Stemcells.2007-0857 |
0.593 |
|
| 2008 |
Lowry WE, Richter L, Yachechko R, Pyle AD, Tchieu J, Sridharan R, Clark AT, Plath K. Generation of human induced pluripotent stem cells from dermal fibroblasts. Proceedings of the National Academy of Sciences of the United States of America. 105: 2883-8. PMID 18287077 DOI: 10.1073/Pnas.0711983105 |
0.615 |
|
| 2006 |
Fenderson BA, De Miguel MP, Pyle AD, Donovan PJ. Staining embryonic stem cells using monoclonal antibodies to stage-specific embryonic antigens. Methods in Molecular Biology (Clifton, N.J.). 325: 207-24. PMID 16761728 DOI: 10.1385/1-59745-005-7:207 |
0.567 |
|
| 2006 |
Pyle AD, Lock LF, Donovan PJ. Neurotrophins mediate human embryonic stem cell survival. Nature Biotechnology. 24: 344-50. PMID 16444268 DOI: 10.1038/Nbt1189 |
0.541 |
|
| 2005 |
Dravid G, Ye Z, Hammond H, Chen G, Pyle A, Donovan P, Yu X, Cheng L. Defining the role of Wnt/beta-catenin signaling in the survival, proliferation, and self-renewal of human embryonic stem cells. Stem Cells (Dayton, Ohio). 23: 1489-501. PMID 16002782 DOI: 10.1634/Stemcells.2005-0034 |
0.528 |
|
| 2004 |
Pyle AD, Donovan PJ, Lock LF. Chipping away at 'stemness'. Genome Biology. 5: 235. PMID 15287966 DOI: 10.1186/Gb-2004-5-8-235 |
0.578 |
|
| Show low-probability matches. |