| Year |
Citation |
Score |
| 2023 |
Zambrano-Mila MS, Witzenberger M, Rosenwasser Z, Uzonyi A, Nir R, Ben-Aroya S, Levanon EY, Schwartz S. Dissecting the basis for differential substrate specificity of ADAR1 and ADAR2. Nature Communications. 14: 8212. PMID 38081817 DOI: 10.1038/s41467-023-43633-0 |
0.372 |
|
| 2022 |
Uzonyi A, Dierks D, Nir R, Kwon OS, Toth U, Barbosa I, Burel C, Brandis A, Rossmanith W, Le Hir H, Slobodin B, Schwartz S. Exclusion of m6A from splice-site proximal regions by the exon junction complex dictates m6A topologies and mRNA stability. Molecular Cell. PMID 36599352 DOI: 10.1016/j.molcel.2022.12.026 |
0.344 |
|
| 2022 |
Nir R, Hoernes TP, Muramatsu H, Faserl K, Karikó K, Erlacher MD, Sas-Chen A, Schwartz S. A systematic dissection of determinants and consequences of snoRNA-guided pseudouridylation of human mRNA. Nucleic Acids Research. 50: 4900-4916. PMID 35536311 DOI: 10.1093/nar/gkac347 |
0.455 |
|
| 2022 |
Uzonyi A, Nir R, Schwartz S. Cloning of DNA oligo pools for expression. Star Protocols. 3: 101103. PMID 35462793 DOI: 10.1016/j.xpro.2021.101103 |
0.367 |
|
| 2021 |
Uzonyi A, Nir R, Shliefer O, Stern-Ginossar N, Antebi Y, Stelzer Y, Levanon EY, Schwartz S. Deciphering the principles of the RNA editing code via large-scale systematic probing. Molecular Cell. PMID 33905683 DOI: 10.1016/j.molcel.2021.03.024 |
0.315 |
|
| 2021 |
Sas-Chen A, Nir R, Schwartz S. mito-Ψ-Seq: A High-Throughput Method for Systematic Mapping of Pseudouridine Within Mitochondrial RNA. Methods in Molecular Biology (Clifton, N.J.). 2192: 103-115. PMID 33230769 DOI: 10.1007/978-1-0716-0834-0_9 |
0.396 |
|
| 2020 |
Sas-Chen A, Thomas JM, Matzov D, Taoka M, Nance KD, Nir R, Bryson KM, Shachar R, Liman GLS, Burkhart BW, Gamage ST, Nobe Y, Briney CA, Levy MJ, Fuchs RT, et al. Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping. Nature. PMID 32555463 DOI: 10.1038/S41586-020-2418-2 |
0.501 |
|
| 2019 |
Garcia-Campos MA, Edelheit S, Toth U, Safra M, Shachar R, Viukov S, Winkler R, Nir R, Lasman L, Brandis A, Hanna JH, Rossmanith W, Schwartz S. Deciphering the "mA Code" via Antibody-Independent Quantitative Profiling. Cell. PMID 31257032 DOI: 10.1016/J.Cell.2019.06.013 |
0.379 |
|
| 2019 |
Weingarten-Gabbay S, Nir R, Lubliner S, Sharon E, Kalma Y, Weinberger A, Segal E. Systematic interrogation of human promoters. Genome Research. PMID 30622120 DOI: 10.1101/Gr.236075.118 |
0.41 |
|
| 2018 |
Vainberg Slutskin I, Weingarten-Gabbay S, Nir R, Weinberger A, Segal E. Unraveling the determinants of microRNA mediated regulation using a massively parallel reporter assay. Nature Communications. 9: 529. PMID 29410437 DOI: 10.1038/S41467-018-02980-Z |
0.463 |
|
| 2017 |
Safra M, Sas-Chen A, Nir R, Winkler R, Nachshon A, Bar-Yaacov D, Erlacher M, Rossmanith W, Stern-Ginossar N, Schwartz S. The m(1)A landscape on cytosolic and mitochondrial mRNA at single-base resolution. Nature. PMID 29072297 DOI: 10.1038/Nature24456 |
0.435 |
|
| 2017 |
Gritsenko AA, Weingarten-Gabbay S, Elias-Kirma S, Nir R, de Ridder D, Segal E. Sequence features of viral and human Internal Ribosome Entry Sites predictive of their activity. Plos Computational Biology. 13: e1005734. PMID 28922394 DOI: 10.1371/Journal.Pcbi.1005734 |
0.46 |
|
| 2017 |
Safra M, Nir R, Farouq D, Schwartz S. TRUB1 is the predominant pseudouridine synthase acting on mammalian mRNA via a predictable and conserved code. Genome Research. PMID 28073919 DOI: 10.1101/Gr.207613.116 |
0.58 |
|
| 2016 |
Weingarten-Gabbay S, Elias-Kirma S, Nir R, Gritsenko AA, Stern-Ginossar N, Yakhini Z, Weinberger A, Segal E. Comparative genetics. Systematic discovery of cap-independent translation sequences in human and viral genomes. Science (New York, N.Y.). 351. PMID 26816383 DOI: 10.1126/Science.Aad4939 |
0.48 |
|
| 2012 |
Nir R, Grossman R, Paroush Z, Volk T. Phosphorylation of the Drosophila melanogaster RNA-binding protein HOW by MAPK/ERK enhances its dimerization and activity. Plos Genetics. 8: e1002632. PMID 22479211 DOI: 10.1371/Journal.Pgen.1002632 |
0.694 |
|
| 2008 |
Volk T, Israeli D, Nir R, Toledano-Katchalski H. Tissue development and RNA control: "HOW" is it coordinated? Trends in Genetics : Tig. 24: 94-101. PMID 18192064 DOI: 10.1016/J.Tig.2007.11.009 |
0.683 |
|
| 2007 |
Toledano-Katchalski H, Nir R, Volohonsky G, Volk T. Post-transcriptional repression of the Drosophila midkine and pleiotrophin homolog miple by HOW is essential for correct mesoderm spreading. Development (Cambridge, England). 134: 3473-81. PMID 17728343 DOI: 10.1242/Dev.006080 |
0.618 |
|
| 2007 |
Israeli D, Nir R, Volk T. Dissection of the target specificity of the RNA-binding protein HOW reveals dpp mRNA as a novel HOW target. Development (Cambridge, England). 134: 2107-14. PMID 17507411 DOI: 10.1242/Dev.001594 |
0.693 |
|
| 2004 |
Reiner O, Gdalyahu A, Ghosh I, Levy T, Sapoznik S, Nir R, Sapir T. DCX's phosphorylation by not just another kinase (JNK). Cell Cycle (Georgetown, Tex.). 3: 747-51. PMID 15118415 DOI: 10.4161/Cc.3.6.909 |
0.361 |
|
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