Timothy Allen Robertson

2007

Gabriele Varani	grad student	2007	University of Washington
(Development and validation of statistical potential functions for the prediction of protein /nucleic acid interactions from structure.)

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Zheng S, Robertson TA, Varani G. (2007) A knowledge-based potential function predicts the specificity and relative binding energy of RNA-binding proteins. The Febs Journal. 274: 6378-91
Robertson TA, Varani G. (2007) An all-atom, distance-dependent scoring function for the prediction of protein-DNA interactions from structure. Proteins. 66: 359-74
Chen Y, Kortemme T, Robertson T, et al. (2004) A new hydrogen-bonding potential for the design of protein-RNA interactions predicts specific contacts and discriminates decoys. Nucleic Acids Research. 32: 5147-62
Chivian D, Kim DE, Malmström L, et al. (2003) Automated prediction of CASP-5 structures using the Robetta server. Proteins. 53: 524-33
Chivian D, Robertson T, Bonneau R, et al. (2003) Ab initio methods Methods of Biochemical Analysis. 44: 547-557
Bonneau R, Strauss CE, Rohl CA, et al. (2002) De novo prediction of three-dimensional structures for major protein families. Journal of Molecular Biology. 322: 65-78