James M. Carothers

Affiliations: 
2006-2012 Chemical Biology University of California, Berkeley, Berkeley, CA, United States 
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"James Carothers"
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Parents

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Jack W. Szostak grad student 2005 Harvard
 (Experimental investigations of informational complexity and RNA functional activity.)
Jay D. Keasling post-doc 2006-2012 UC Berkeley
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Publications

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Kiattisewee C, Dong C, Fontana J, et al. (2021) Portable bacterial CRISPR transcriptional activation enables metabolic engineering in Pseudomonas putida. Metabolic Engineering
Kruyer NS, Sugianto W, Tickman BI, et al. (2021) Membrane Augmented Cell-Free Systems: A New Frontier in Biotechnology. Acs Synthetic Biology
Fontana J, Sparkman-Yager D, Zalatan JG, et al. (2020) Challenges and opportunities with CRISPR activation in bacteria for data-driven metabolic engineering. Current Opinion in Biotechnology. 64: 190-198
Fontana J, Dong C, Kiattisewee C, et al. (2020) Effective CRISPRa-mediated control of gene expression in bacteria must overcome strict target site requirements. Nature Communications. 11: 1618
Barajas JF, Wehrs M, To M, et al. (2019) Isolation and Characterization of Bacterial Cellulase Producers for Biomass Deconstruction: A Microbiology Laboratory Course. Journal of Microbiology & Biology Education. 20
Dong C, Fontana J, Patel A, et al. (2018) Synthetic CRISPR-Cas gene activators for transcriptional reprogramming in bacteria. Nature Communications. 9: 2489
Fontana J, Voje WE, Zalatan JG, et al. (2018) Prospects for engineering dynamic CRISPR-Cas transcriptional circuits to improve bioproduction. Journal of Industrial Microbiology & Biotechnology
Fontana J, Dong C, Ham JY, et al. (2018) Regulated expression of sgRNAs tunes CRISPRi in E. coli. Biotechnology Journal. e1800069
Hwang C, Carothers JM. (2016) Label-free selection of RNA aptamers for metabolic engineering. Methods (San Diego, Calif.)
Burke CR, Carothers JM. (2016) RNA-Based Molecular Sensors for Biosynthetic Pathway Design, Evolution, and Optimization Biotechnology For Biofuel Production and Optimization. 117-138
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