James M. Carothers

Affiliations: 
2006-2012 Chemical Biology University of California, Berkeley, Berkeley, CA 
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Jack W. Szostak grad student 2005 Harvard
 (Experimental investigations of informational complexity and RNA functional activity.)
Jay D. Keasling post-doc 2006-2012 UC Berkeley
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Barajas JF, Wehrs M, To M, et al. (2019) Isolation and Characterization of Bacterial Cellulase Producers for Biomass Deconstruction: A Microbiology Laboratory Course. Journal of Microbiology & Biology Education. 20
Burke CR, Carothers JM. (2016) RNA-Based Molecular Sensors for Biosynthetic Pathway Design, Evolution, and Optimization Biotechnology For Biofuel Production and Optimization. 117-138
Thimmaiah T, Voje WE, Carothers JM. (2015) Computational design of RNA parts, devices, and transcripts with kinetic folding algorithms implemented on multiprocessor clusters. Methods in Molecular Biology (Clifton, N.J.). 1244: 45-61
Goler JA, Carothers JM, Keasling JD. (2014) Dual-selection for evolution of in vivo functional aptazymes as riboswitch parts. Methods in Molecular Biology (Clifton, N.J.). 1111: 221-35
Carothers JM. (2013) Design-driven, multi-use research agendas to enable applied synthetic biology for global health. Systems and Synthetic Biology. 7: 79-86
Cambray G, Guimaraes JC, Mutalik VK, et al. (2013) Measurement and modeling of intrinsic transcription terminators. Nucleic Acids Research. 41: 5139-48
Zhang F, Carothers JM, Keasling JD. (2012) Design of a dynamic sensor-regulator system for production of chemicals and fuels derived from fatty acids. Nature Biotechnology. 30: 354-9
Carothers JM, Goler JA, Juminaga D, et al. (2011) Model-driven engineering of RNA devices to quantitatively program gene expression. Science (New York, N.Y.). 334: 1716-9
Carothers JM, Goler JA, Kapoor Y, et al. (2010) Selecting RNA aptamers for synthetic biology: investigating magnesium dependence and predicting binding affinity. Nucleic Acids Research. 38: 2736-47
Carothers JM, Goler JA, Keasling JD. (2009) Chemical synthesis using synthetic biology. Current Opinion in Biotechnology. 20: 498-503
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