Michael R. Hoopmann, Ph.D.
Institution:
University of Washington, Seattle, Seattle, WAGoogle:
"Michael Hoopmann"Mean distance: 12.14 | S | N | B | C | P |
Parents
Sign in to add mentor| Michael J. MacCoss | grad student | 2005-2009 | University of Washington | |
| (Feature detection using high-resolution mass spectrometry: Software and applications for shotgun proteomics.) | ||||
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Publications
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| Deutsch EW, Mendoza L, Shteynberg DD, et al. (2023) Trans-Proteomic Pipeline: Robust Mass Spectrometry-Based Proteomics Data Analysis Suite. Journal of Proteome Research |
| Hoopmann MR, Shteynberg DD, Zelter A, et al. (2023) Improved Analysis of Cross-Linking Mass Spectrometry Data with Kojak 2.0, Advanced by Integration into the Trans-Proteomic Pipeline. Journal of Proteome Research. 22: 647-655 |
| Kertesz-Farkas A, Nii Adoquaye Acquaye FL, Bhimani K, et al. (2023) The Crux Toolkit for Analysis of Bottom-Up Tandem Mass Spectrometry Proteomics Data. Journal of Proteome Research |
| Riffle M, Hoopmann MR, Jaschob D, et al. (2022) Discovery and Visualization of Uncharacterized Drug-Protein Adducts Using Mass Spectrometry. Analytical Chemistry |
| Kailash V, Mendoza L, Moritz RL, et al. (2021) SPACEPro: A Software Tool for Analysis of Protein Sample Cleavage for Tandem Mass Spectrometry. Journal of Proteome Research |
| Hoopmann MR, Kusebauch U, Palmblad M, et al. (2020) Insights from the First Phosphopeptide Challenge of the MS Resource Pillar of the HUPO Human Proteome Project. Journal of Proteome Research |
| Midha MK, Campbell DS, Kapil C, et al. (2020) DIALib-QC an assessment tool for spectral libraries in data-independent acquisition proteomics. Nature Communications. 11: 5251 |
| Leitner A, Bonvin AMJJ, Borchers CH, et al. (2020) Toward Increased Reliability, Transparency, and Accessibility in Cross-linking Mass Spectrometry. Structure (London, England : 1993) |
| Shteynberg DD, Deutsch EW, Campbell DS, et al. (2019) PTMProphet: Fast and Accurate Mass Modification Localization for the Trans-Proteomic Pipeline. Journal of Proteome Research |
| Iacobucci C, Piotrowski C, Aebersold R, et al. (2019) The First Community-Wide, Comparative Cross-linking Mass Spectrometry Study. Analytical Chemistry |