Qiangfeng C. Zhang, Ph.D.

Affiliations: 
Biochemistry and Molecular Biophysics Columbia University, New York, NY 
Area:
computational biophysics and bioinformatics
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"Qiangfeng Zhang"
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Parents

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Barry H. Honig grad student 2011 Columbia
 (Towards the integration of structural and systems biology: Structure-based studies of protein-protein interactions on a genome-wide scale.)
Howard Y. Chang post-doc 2012-2015 Stanford
Michael Snyder post-doc 2012-2015 Stanford (Computational Biology Tree)
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Publications

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Lu Z, Zhang QC, Lee B, et al. (2016) RNA Duplex Map in Living Cells Reveals Higher-Order Transcriptome Structure. Cell
Quinn JJ, Zhang QC, Georgiev P, et al. (2016) Rapid evolutionary turnover underlies conserved lncRNA-genome interactions. Genes & Development. 30: 191-207
Flynn RA, Zhang QC, Spitale RC, et al. (2016) Transcriptome-wide interrogation of RNA secondary structure in living cells with icSHAPE. Nature Protocols. 11: 273-90
Spitale RC, Flynn RA, Zhang QC, et al. (2015) Erratum: Structural imprints in vivo decode RNA regulatory mechanisms. Nature
Chu C, Zhang QC, da Rocha ST, et al. (2015) Systematic discovery of Xist RNA binding proteins. Cell. 161: 404-16
Spitale RC, Flynn RA, Zhang QC, et al. (2015) Structural imprints in vivo decode RNA regulatory mechanisms. Nature. 519: 486-90
Deng L, Zhang QC, Chen Z, et al. (2014) PredHS: a web server for predicting protein-protein interaction hot spots by using structural neighborhood properties. Nucleic Acids Research. 42: W290-5
Wan Y, Qu K, Zhang QC, et al. (2014) Landscape and variation of RNA secondary structure across the human transcriptome. Nature. 505: 706-9
Kasowski M, Kyriazopoulou-Panagiotopoulou S, Grubert F, et al. (2013) Extensive variation in chromatin states across humans. Science (New York, N.Y.). 342: 750-2
Deng L, Guan J, Wei X, et al. (2013) Boosting prediction performance of protein-protein interaction hot spots by using structural neighborhood properties. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 20: 878-91
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