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James B. Brown

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2008 University of California, Berkeley, Berkeley, CA 
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"James Brown"
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Peter J. Bickel grad student 2008 UC Berkeley
 (Mapping the affinities of sequence-specific DNA-binding proteins.)
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Publications

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Hörtenhuber M, Mukarram AK, Stoiber MH, et al. (2020) *-DCC: A platform to collect, annotate, and explore a large variety of sequencing experiments. Gigascience. 9
Langley S, Eng T, Wan KH, et al. (2019) Complete Genome Sequence of sp. Strain 33MFTa1.1, Isolated from Roots. Microbiology Resource Announcements. 8
Arbel H, Basu S, Fisher WW, et al. (2018) Exploiting regulatory heterogeneity to systematically identify enhancers with high accuracy. Proceedings of the National Academy of Sciences of the United States of America
Parra M, Booth BW, Weiszmann R, et al. (2018) An important class of intron retention events in human erythroblasts is regulated by cryptic exons proposed to function as splicing decoys. Rna (New York, N.Y.)
Miyano M, Sayaman RW, Stoiber MH, et al. (2017) Age-related gene expression in luminal epithelial cells is driven by a microenvironment made from myoepithelial cells. Aging
Orsini L, Brown JB, Shams Solari O, et al. (2017) Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean specific genes. Molecular Ecology
Snijders AM, Langley SA, Kim YM, et al. (2016) Influence of early life exposure, host genetics and diet on the mouse gut microbiome and metabolome. Nature Microbiology. 2: 16221
Zhang W, Mao JH, Zhu W, et al. (2016) Centromere and kinetochore gene misexpression predicts cancer patient survival and response to radiotherapy and chemotherapy. Nature Communications. 7: 12619
Orsini L, Gilbert D, Podicheti R, et al. (2016) Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors. Scientific Data. 3: 160030
Mao JH, Langley SA, Huang Y, et al. (2015) Identification of genetic factors that modify motor performance and body weight using Collaborative Cross mice. Scientific Reports. 5: 16247
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