James Smadbeck, Ph.D.
Affiliations: | Chemical and Biological Engineering | Princeton University, Princeton, NJ |
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"James Smadbeck"Mean distance: 14.21 | S | N | B | C | P |
Parents
Sign in to add mentor| Christodoulos A. Floudas | grad student | 2015 | Princeton | |
| (Advances in Protein Design: Conformational Switch, Multimeric, and Protein-DNA Design.) | ||||
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Publications
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| Keasar C, McGuffin LJ, Wallner B, et al. (2018) An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12. Scientific Reports. 8: 9939 |
| Khoury GA, Smadbeck J, Kieslich CA, et al. (2017) Princeton_TIGRESS 2.0: High refinement consistency and net gains through support vector machines and molecular dynamics in double-blind predictions during the CASP11 experiment. Proteins |
| Kieslich CA, Smadbeck J, Khoury GA, et al. (2016) conSSert: Consensus SVM model for accurate prediction of ordered secondary structure. Journal of Chemical Information and Modeling |
| Gorham RD, Forest DL, Khoury GA, et al. (2015) New compstatin peptides containing N-terminal extensions and non-natural amino acids exhibit potent complement inhibition and improved solubility characteristics. Journal of Medicinal Chemistry. 58: 814-26 |
| Misener R, Smadbeck JB, Floudas CA. (2015) Dynamically generated cutting planes for mixed-integer quadratically constrained quadratic programs and their incorporation into GloMIQO 2 Optimization Methods and Software. 30: 215-249 |
| Halai R, Bellows-Peterson ML, Branchett W, et al. (2014) Derivation of ligands for the complement C3a receptor from the C-terminus of C5a. European Journal of Pharmacology. 745: 176-81 |
| Smadbeck J, Chan KH, Khoury GA, et al. (2014) De novo design and experimental characterization of ultrashort self-associating peptides. Plos Computational Biology. 10: e1003718 |
| Khoury GA, Smadbeck J, Tamamis P, et al. (2014) Forcefield_NCAA: ab initio charge parameters to aid in the discovery and design of therapeutic proteins and peptides with unnatural amino acids and their application to complement inhibitors of the compstatin family. Acs Synthetic Biology. 3: 855-69 |
| Smadbeck J, Peterson MB, Zee BM, et al. (2014) De novo peptide design and experimental validation of histone methyltransferase inhibitors. Plos One. 9: e95535 |
| Khoury GA, Liwo A, Khatib F, et al. (2014) WeFold: a coopetition for protein structure prediction. Proteins. 82: 1850-68 |