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Dennis M. Vitkup, Ph.D.

Affiliations: 
Biomedical Informatics Columbia University, New York, NY 
 1999 Brandeis University, Waltham, MA, United States 
Area:
relationship of protein three-dimensional structure to chemical function
Website:
https://www.dbmi.columbia.edu/people/dennis-vitkup/
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"Dennis Vitkup"
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SNBCP

Parents

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Gregory A. Petsko grad student 2000 Brandeis
 (Nature of protein glass transition and x-ray experiments in silico.)
Dagmar Ringe grad student 2000 Brandeis
 (Nature of protein glass transition and x-ray experiments in silico.)
Martin Karplus grad student 1994-2000 Harvard
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Publications

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Mayers JR, Torrence ME, Danai LV, et al. (2016) Tissue of origin dictates branched-chain amino acid metabolism in mutant Kras-driven cancers. Science (New York, N.Y.). 353: 1161-5
Chang J, Gilman SR, Chiang AH, et al. (2015) Genotype to phenotype relationships in autism spectrum disorders. Nature Neuroscience. 18: 191-8
Plata G, Henry CS, Vitkup D. (2015) Long-term phenotypic evolution of bacteria Nature. 517: 369-372
Anton BP, Chang YC, Brown P, et al. (2013) The COMBREX project: design, methodology, and initial results. Plos Biology. 11: e1001638
Hu J, Locasale JW, Bielas JH, et al. (2013) Heterogeneity of tumor-induced gene expression changes in the human metabolic network. Nature Biotechnology. 31: 522-9
Eydgahi H, Chen WW, Muhlich JL, et al. (2013) Properties of cell death models calibrated and compared using Bayesian approaches. Molecular Systems Biology. 9: 644
Gilman SR, Chang J, Xu B, et al. (2012) Diverse types of genetic variation converge on functional gene networks involved in schizophrenia. Nature Neuroscience. 15: 1723-8
Meyer P, Alexopoulos LG, Bonk T, et al. (2011) Verification of systems biology research in the age of collaborative competition. Nature Biotechnology. 29: 811-5
Gilman SR, Iossifov I, Levy D, et al. (2011) Rare de novo variants associated with autism implicate a large functional network of genes involved in formation and function of synapses. Neuron. 70: 898-907
Roberts RJ, Chang YC, Hu Z, et al. (2011) COMBREX: a project to accelerate the functional annotation of prokaryotic genomes. Nucleic Acids Research. 39: D11-4
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