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Vanja Stojkovic, Ph.D.

Affiliations: 
Chemistry University of Iowa, Iowa City, IA 
Area:
Enzyme Catalysis
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"Vanja Stojkovic"
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Parents

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Amnon Kohen grad student 2012 University of Iowa
 (Contribution of active site dynamics to enzyme catalysis: Study on a series of mutants of dihydrofolate reductase.)
Danica G. Fujimori post-doc 2013- UCSF

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Publications

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Tsai K, Stojković V, Lee DJ, et al. (2022) Structural basis for context-specific inhibition of translation by oxazolidinone antibiotics. Nature Structural & Molecular Biology. 29: 162-171
Tsai K, Stojković V, Noda-Garcia L, et al. (2022) Directed evolution of the rRNA methylating enzyme Cfr reveals molecular basis of antibiotic resistance. Elife. 11
Stojković V, Weinberg DE, Fujimori DG. (2021) miCLIP-MaPseq Identifies Substrates of Radical SAM RNA-Methylating Enzyme Using Mechanistic Cross-Linking and Mismatch Profiling. Methods in Molecular Biology (Clifton, N.J.). 2298: 105-122
Stojković V, Myasnikov AG, Young ID, et al. (2020) Assessment of the nucleotide modifications in the high-resolution cryo-electron microscopy structure of the Escherichia coli 50S subunit. Nucleic Acids Research
Stojković V, Ulate MF, Hidalgo-Villeda F, et al. (2019) cfr(B), (C), and a new -like gene, (E), in strains recovered across Latin America. Antimicrobial Agents and Chemotherapy
Stojković V, Chu T, Therizols G, et al. (2018) miCLIP-MaPseq, a substrate identification approach for radical SAM RNA methylating enzymes. Journal of the American Chemical Society
Stojković V, Fujimori DG. (2017) Mutations in RNA methylating enzymes in disease. Current Opinion in Chemical Biology. 41: 20-27
Stojković V, Noda-Garcia L, Tawfik DS, et al. (2016) Antibiotic resistance evolved via inactivation of a ribosomal RNA methylating enzyme. Nucleic Acids Research
Stojković V, Fujimori DG. (2015) Radical SAM-Mediated Methylation of Ribosomal RNA. Methods in Enzymology. 560: 355-76
Francis K, Stojković V, Kohen A. (2013) Preservation of protein dynamics in dihydrofolate reductase evolution Journal of Biological Chemistry. 288: 35961-35968
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