Derek A. Debe, Ph.D.
Affiliations: | California Institute of Technology, Pasadena, CA |
Area:
Structure and function of membrane proteinsGoogle:
"Derek Debe"Mean distance: 8.78 | S | N | B | C | P |
Parents
Sign in to add mentor| Sunney I. Chan | grad student | 2001 | Caltech | |
| (Shaving Levinthal with Occam's razor: Understanding the rate limiting step in protein folding.) | ||||
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Publications
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| Poleksic A, Fienup M, Danzer JF, et al. (2008) A different look at the quality of modeled three-dimensional protein structures. Journal of Bioinformatics and Computational Biology. 6: 335-45 |
| Hambly K, Danzer J, Muskal S, et al. (2006) Interrogating the druggable genome with structural informatics. Molecular Diversity. 10: 273-81 |
| Poleksic A, Danzer JF, Palmer BA, et al. (2006) SPINFAST: using structure alignment profiles to enhance the accuracy and assess the reliability of protein side-chain modeling. Proteins. 65: 953-8 |
| Palmer B, Danzer JF, Hambly K, et al. (2006) StructSorter: a method for continuously updating a comprehensive protein structure alignment database. Journal of Chemical Information and Modeling. 46: 1871-6 |
| Debe DA, Danzer JF, Goddard WA, et al. (2006) STRUCTFAST: protein sequence remote homology detection and alignment using novel dynamic programming and profile-profile scoring. Proteins. 64: 960-7 |
| Zhang D, Vaidehi N, Goddard WA, et al. (2002) Structure-based design of mutant Methanococcus jannaschii tyrosyl-tRNA synthetase for incorporation of O-methyl-L-tyrosine. Proceedings of the National Academy of Sciences of the United States of America. 99: 6579-84 |
| Debe DA, Goddard WA. (1999) First principles prediction of protein folding rates. Journal of Molecular Biology. 294: 619-25 |
| Debe DA, Carlson MJ, Goddard WA. (1999) The topomer-sampling model of protein folding. Proceedings of the National Academy of Sciences of the United States of America. 96: 2596-601 |
| Debe DA, Carlson MJ, Sadanobu J, et al. (1999) Protein Fold Determination from Sparse Distance Restraints: The Restrained Generic Protein Direct Monte Carlo Method Journal of Physical Chemistry B. 103: 3001-3008 |
| Cavagnero S, Debe DA, Zhou ZH, et al. (1998) Kinetic role of electrostatic interactions in the unfolding of hyperthermophilic and mesophilic rubredoxins. Biochemistry. 37: 3369-76 |