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Jejoong Yoo, Ph.D.

Affiliations: 
2010 University of Wisconsin, Madison, Madison, WI 
Area:
computational chemistry and biophysics
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"Jejoong Yoo"
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Parents

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Qiang Cui grad student 2010 UW Madison
 (Computational and theoretical studies of lipid membrane and protein-membrane interactions.)
Aleksei Aksimentiev post-doc UIUC (Physics Tree)

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Publications

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Kim M, Bae S, Oh I, et al. (2021) Sequence-dependent twist-bend coupling in DNA minicircles. Nanoscale
Yoo J, Park S, Maffeo C, et al. (2021) DNA sequence and methylation prescribe the inside-out conformational dynamics and bending energetics of DNA minicircles. Nucleic Acids Research
Bae S, Oh I, Yoo J, et al. (2021) Effect of DNA Flexibility on Complex Formation of a Cationic Nanoparticle with Double-Stranded DNA. Acs Omega. 6: 18728-18736
Yoo J, Winogradoff D, Aksimentiev A. (2020) Molecular dynamics simulations of DNA-DNA and DNA-protein interactions. Current Opinion in Structural Biology. 64: 88-96
You S, Lee H, Kim K, et al. (2020) Improved Parameterization of Protein-DNA Interactions for Molecular Dynamics Simulations of PCNA Diffusion on DNA. Journal of Chemical Theory and Computation
You S, Yoo J. (2019) Molecular Dynamics Simulations using Accurate Charge-Charge Interactions Predict Unexpected Phase Behaviors of DNA Controlled by Epigenetic Modifications Biophysical Journal. 116: 437a
Yoo J, Li CY, Slone SM, et al. (2018) Correction to: A Practical Guide to Molecular Dynamics Simulations of DNA Origami Systems. Methods in Molecular Biology (Clifton, N.J.). 1811: E3
Kang H, Yoo J, Sohn BK, et al. (2018) Sequence-dependent DNA condensation as a driving force of DNA phase separation. Nucleic Acids Research
Ohmann A, Li CY, Maffeo C, et al. (2018) A synthetic enzyme built from DNA flips 10 lipids per second in biological membranes. Nature Communications. 9: 2426
Yoo J, Li CY, Slone SM, et al. (2018) A Practical Guide to Molecular Dynamics Simulations of DNA Origami Systems. Methods in Molecular Biology (Clifton, N.J.). 1811: 209-229
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