Eric J. Sorin, Ph.D.
Affiliations: | 2007 | Stanford University, Palo Alto, CA |
Area:
theoretical methods to understand the physical properties of biological moleculesGoogle:
"Eric Sorin"Mean distance: 10.38 | S | N | B | C | P |
Parents
Sign in to add mentor| Vijay S. Pande | grad student | 2007 | Stanford | |
| (Biomolecular assembly in silico: Using massively parallel simulations to probe protein and RNA folding dynamics.) | ||||
BETA: Related publications
See more...
Publications
|
You can help our author matching system! If you notice any publications incorrectly attributed to this author, please sign in and mark matches as correct or incorrect. |
| Bremer PL, De Boer D, Alvarado W, et al. (2020) Overcoming the Heuristic Nature of -means Clustering: Identification and Characterization of Binding Modes from Simulations of Molecular Recognition Complexes. Journal of Chemical Information and Modeling |
| Alvarado W, Ladd Bremer P, Choy A, et al. (2019) Understanding the Enzyme-Ligand Complex: Insights from All-Atom Simulations of Butyrylcholinesterase Inhibition. Journal of Biomolecular Structure & Dynamics. 1-17 |
| Sorin EJ, Alvarado W, Cao S, et al. (2017) Ensemble Molecular Dynamics of a Protein-Ligand Complex: Residual Inhibitor Entropy Enhances Drug Potency in Butyrylcholinesterase. Bioenergetics : Open Access. 6 |
| Q Nguyen KK, Gomez YK, Bakhom M, et al. (2017) Ensemble simulations: folding, unfolding and misfolding of a high-efficiency frameshifting RNA pseudoknot. Nucleic Acids Research |
| Thompson EJ, DePaul AJ, Patel SS, et al. (2010) Evaluating molecular mechanical potentials for helical peptides and proteins. Plos One. 5: e10056 |
| DePaul AJ, Thompson EJ, Patel SS, et al. (2010) Equilibrium conformational dynamics in an RNA tetraloop from massively parallel molecular dynamics. Nucleic Acids Research. 38: 4856-67 |
| Monticelli L, Sorin EJ, Tieleman DP, et al. (2008) Molecular simulation of multistate peptide dynamics: a comparison between microsecond timescale sampling and multiple shorter trajectories. Journal of Computational Chemistry. 29: 1740-52 |
| Sorin EJ, Pande VS. (2006) Nanotube confinement denatures protein helices. Journal of the American Chemical Society. 128: 6316-7 |
| Sorin EJ, Rhee YM, Shirts MR, et al. (2006) The solvation interface is a determining factor in peptide conformational preferences. Journal of Molecular Biology. 356: 248-56 |
| Fujitani H, Tanida Y, Ito M, et al. (2005) Direct calculation of the binding free energies of FKBP ligands. The Journal of Chemical Physics. 123: 084108 |